RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CDC42BPGQ6DT37 1551 aa9.99□□□□□ -0.81
LSM5-208ENST00000450169 PNPLA6Q8IY17 1366 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 CTAGE5O15320 804 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 PPFIA4O75335 1185 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 USP8P40818 1118 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 EIF5P55010 431 aaKnown RBP9.98□□□□□ -0.81
LSM5-208ENST00000450169 PPP2R3AQ06190 1150 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 MCM6Q14566 821 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 TTLL5Q6EMB2 1281 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 CWC27Q6UX04 472 aaKnown RBP9.98□□□□□ -0.81
LSM5-208ENST00000450169 TMC6Q7Z403 805 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 CEP57L1Q8IYX8 460 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 AOPEPQ8N6M6 819 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 TMEM106CQ9BVX2 250 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 ANO10Q9NW15 660 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 STAP2Q9UGK3 403 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 FAN1Q9Y2M0 1017 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
LSM5-208ENST00000450169 NRXN1Q9ULB1 1477 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 GOLIM4O00461 696 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 SGSM2O43147 1006 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 ERLIN2O94905 339 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 PSME1Q06323 249 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 LRCH2Q5VUJ6 765 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 NBPF6Q5VWK0 638 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 NECAB1Q8N987 351 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 GOLGA1Q92805 767 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 PHACTR3Q96KR7 559 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 NBPF4Q96M43 638 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 REPIN1Q9BWE0 567 aaKnown RBP9.98□□□□□ -0.81
LSM5-208ENST00000450169 LSG1Q9H089 658 aaKnown RBP9.98□□□□□ -0.81
LSM5-208ENST00000450169 ADGRB3O60242 1522 aa9.98□□□□□ -0.81
LSM5-208ENST00000450169 ADGRB1O14514 1584 aa9.97□□□□□ -0.81
LSM5-208ENST00000450169 PPP1R12AO14974 1030 aaPredicted RBP9.97□□□□□ -0.81
LSM5-208ENST00000450169 IFIT2P09913 472 aaKnown RBP9.97□□□□□ -0.81
LSM5-208ENST00000450169 TXLNAP40222 546 aa9.97□□□□□ -0.81
LSM5-208ENST00000450169 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
LSM5-208ENST00000450169 ME3Q16798 604 aa9.97□□□□□ -0.81
LSM5-208ENST00000450169 HDXQ7Z353 690 aa9.97□□□□□ -0.81
LSM5-208ENST00000450169 ERC1Q8IUD2 1116 aa9.97□□□□□ -0.81
LSM5-208ENST00000450169 MSL3Q8N5Y2 521 aaKnown RBP9.97□□□□□ -0.81
LSM5-208ENST00000450169 KAT2BQ92831 832 aa9.97□□□□□ -0.81
LSM5-208ENST00000450169 PUS7Q96PZ0 661 aaKnown RBP9.97□□□□□ -0.81
LSM5-208ENST00000450169 PHF12Q96QT6 1004 aa9.97□□□□□ -0.81
LSM5-208ENST00000450169 MPHOSPH8Q99549 860 aa9.97□□□□□ -0.81
LSM5-208ENST00000450169 NAT10Q9H0A0 1025 aaKnown RBP9.97□□□□□ -0.81
LSM5-208ENST00000450169 RAI14Q9P0K7 980 aa9.97□□□□□ -0.81
LSM5-208ENST00000450169 N4BP1O75113 896 aaKnown RBP9.96□□□□□ -0.81
LSM5-208ENST00000450169 NBPF20Q3BBV1 942 aa9.96□□□□□ -0.81
LSM5-208ENST00000450169 CNNM3Q8NE01 707 aa9.96□□□□□ -0.81
LSM5-208ENST00000450169 HNRNPLLQ8WVV9 542 aaKnown RBP9.96□□□□□ -0.81
LSM5-208ENST00000450169 XPO4Q9C0E2 1151 aaKnown RBP9.96□□□□□ -0.81
LSM5-208ENST00000450169 PLEKHA4Q9H4M7 779 aa9.96□□□□□ -0.81
LSM5-208ENST00000450169 MRFAP1Q9Y605 127 aa9.96□□□□□ -0.81
LSM5-208ENST00000450169 A0A1W2PP64 1363 aa9.96□□□□□ -0.81
LSM5-208ENST00000450169 AOX1Q06278 1338 aa9.96□□□□□ -0.81
LSM5-208ENST00000450169 HNRNPH1P31943 449 aaKnown RBP9.96□□□□□ -0.82
LSM5-208ENST00000450169 PPP2R5AQ15172 486 aa9.96□□□□□ -0.82
LSM5-208ENST00000450169 PLEKHO1Q53GL0 409 aaPredicted RBP9.96□□□□□ -0.82
LSM5-208ENST00000450169 POM121Q96HA1 1249 aa9.96□□□□□ -0.82
LSM5-208ENST00000450169 JAKMIP1Q96N16 626 aaKnown RBP9.96□□□□□ -0.82
LSM5-208ENST00000450169 TACO1Q9BSH4 297 aaKnown RBP9.96□□□□□ -0.82
LSM5-208ENST00000450169 BICC1Q9H694 974 aaKnown RBP9.96□□□□□ -0.82
LSM5-208ENST00000450169 CYP46A1Q9Y6A2 500 aa9.96□□□□□ -0.82
LSM5-208ENST00000450169 KIF13AQ9H1H9 1805 aa9.96□□□□□ -0.82
LSM5-208ENST00000450169 A0A087WWV3 80 aa9.95□□□□□ -0.82
LSM5-208ENST00000450169 HSP90B2PQ58FF3 399 aa9.95□□□□□ -0.82
LSM5-208ENST00000450169 BEND6Q5SZJ8 279 aaPredicted RBP9.95□□□□□ -0.82
LSM5-208ENST00000450169 RNF217Q8TC41 542 aa9.95□□□□□ -0.82
LSM5-208ENST00000450169 SGSM3Q96HU1 749 aa9.95□□□□□ -0.82
LSM5-208ENST00000450169 IFNKQ9P0W0 207 aa9.95□□□□□ -0.82
LSM5-208ENST00000450169 ADCY9O60503 1353 aa9.95□□□□□ -0.82
LSM5-208ENST00000450169 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
LSM5-208ENST00000450169 MAP2K1Q02750 393 aaPredicted RBP9.95□□□□□ -0.82
LSM5-208ENST00000450169 KCNV1Q6PIU1 500 aa9.95□□□□□ -0.82
LSM5-208ENST00000450169 FAM71BQ8TC56 605 aa9.95□□□□□ -0.82
LSM5-208ENST00000450169 TULP4Q9NRJ4 1543 aa9.95□□□□□ -0.82
LSM5-208ENST00000450169 ANKRD26Q9UPS8 1709 aa9.95□□□□□ -0.82
LSM5-208ENST00000450169 RIMS2Q9UQ26 1411 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 ZSCAN12O43309 604 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 GIGYF1O75420 1035 aaPredicted RBP9.94□□□□□ -0.82
LSM5-208ENST00000450169 HMOX1P09601 288 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 CALRP27797 417 aaKnown RBP9.94□□□□□ -0.82
LSM5-208ENST00000450169 LIG3P49916 1009 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 ADCK5Q3MIX3 580 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 DPY19L2Q6NUT2 758 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 FAM177A1Q8N128 213 aaPredicted RBP9.94□□□□□ -0.82
LSM5-208ENST00000450169 ZSWIM6Q9HCJ5 1215 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 PPLO60437 1756 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 CPSF1Q10570 1443 aaKnown RBP9.94□□□□□ -0.82
LSM5-208ENST00000450169 VWA3AA6NCI4 1184 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 A6NJR5 290 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 FYB1O15117 783 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 GNPATO15228 680 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 C21orf2O43822 256 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 ERLIN1O75477 346 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 USP5P45974 858 aa9.94□□□□□ -0.82
LSM5-208ENST00000450169 LARP1Q6PKG0 1096 aaKnown RBP9.94□□□□□ -0.82
LSM5-208ENST00000450169 GIGYF2Q6Y7W6 1299 aaKnown RBP9.94□□□□□ -0.82
LSM5-208ENST00000450169 WDR24Q96S15 920 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms