RNA–Protein interactions for RNA: ENST00000449784.5

COPS7B-214, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-214ENST00000449784 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
COPS7B-214ENST00000449784 ATG3Q9NT62 314 aa12.26□□□□□ -0.45
COPS7B-214ENST00000449784 LRRC4BQ9NT99 713 aa12.26□□□□□ -0.45
COPS7B-214ENST00000449784 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
COPS7B-214ENST00000449784 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
COPS7B-214ENST00000449784 TEFQ10587 303 aa12.25□□□□□ -0.45
COPS7B-214ENST00000449784 MCM10Q7L590 875 aa12.25□□□□□ -0.45
COPS7B-214ENST00000449784 C1QTNF2Q9BXJ5 285 aa12.25□□□□□ -0.45
COPS7B-214ENST00000449784 LOC102724428A0A0B4J2F2 783 aa12.24□□□□□ -0.45
COPS7B-214ENST00000449784 SIK1P57059 783 aa12.24□□□□□ -0.45
COPS7B-214ENST00000449784 RIPK4P57078 832 aa12.24□□□□□ -0.45
COPS7B-214ENST00000449784 CTDSPL2Q05D32 466 aa12.24□□□□□ -0.45
COPS7B-214ENST00000449784 LMOD3Q0VAK6 560 aa12.24□□□□□ -0.45
COPS7B-214ENST00000449784 DCTN1Q14203 1278 aa12.24□□□□□ -0.45
COPS7B-214ENST00000449784 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
COPS7B-214ENST00000449784 MEIOBQ8N635 442 aa12.24□□□□□ -0.45
COPS7B-214ENST00000449784 CCNL1Q9UK58 526 aaPredicted RBP12.24□□□□□ -0.45
COPS7B-214ENST00000449784 RRP7AQ9Y3A4 280 aaKnown RBP12.23□□□□□ -0.45
COPS7B-214ENST00000449784 SIPA1L3O60292 1781 aaPredicted RBP12.23□□□□□ -0.45
COPS7B-214ENST00000449784 KCPQ6ZWJ8 1503 aa12.22□□□□□ -0.45
COPS7B-214ENST00000449784 DLG5Q8TDM6 1919 aa12.22□□□□□ -0.45
COPS7B-214ENST00000449784 APAF1O14727 1248 aa12.22□□□□□ -0.45
COPS7B-214ENST00000449784 SLC4A9Q96Q91 983 aa12.22□□□□□ -0.45
COPS7B-214ENST00000449784 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
COPS7B-214ENST00000449784 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
COPS7B-214ENST00000449784 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.45
COPS7B-214ENST00000449784 KCNQ4P56696 695 aa12.21□□□□□ -0.45
COPS7B-214ENST00000449784 SLC39A6Q13433 755 aa12.21□□□□□ -0.45
COPS7B-214ENST00000449784 ZNF790Q6PG37 636 aa12.21□□□□□ -0.45
COPS7B-214ENST00000449784 CCDC116Q8IYX3 515 aa12.21□□□□□ -0.45
COPS7B-214ENST00000449784 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
COPS7B-214ENST00000449784 CICQ96RK0 1608 aaPredicted RBP12.21□□□□□ -0.46
COPS7B-214ENST00000449784 BTBD11A6QL63 1104 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
COPS7B-214ENST00000449784 ITPK1Q13572 414 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 TAF7Q15545 349 aaPredicted RBP12.2□□□□□ -0.46
COPS7B-214ENST00000449784 NEUROD2Q15784 382 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 SLC15A2Q16348 729 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 ZNF827Q17R98 1081 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 FAM9BQ8IZU0 186 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 LRRN4Q8WUT4 740 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 DNMT3LQ9UJW3 386 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 MAP4K5Q9Y4K4 846 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 UBR2Q8IWV8 1755 aa12.2□□□□□ -0.46
COPS7B-214ENST00000449784 TRMT44Q8IYL2 757 aaKnown RBP12.19□□□□□ -0.46
COPS7B-214ENST00000449784 TTC5Q8N0Z6 440 aa12.19□□□□□ -0.46
COPS7B-214ENST00000449784 STK32BQ9NY57 414 aa12.19□□□□□ -0.46
COPS7B-214ENST00000449784 C5P01031 1676 aa12.19□□□□□ -0.46
COPS7B-214ENST00000449784 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
COPS7B-214ENST00000449784 R3HDM1Q15032 1099 aaKnown RBP12.18□□□□□ -0.46
COPS7B-214ENST00000449784 CCDC27Q2M243 656 aa12.18□□□□□ -0.46
COPS7B-214ENST00000449784 LINC00116Q8NCU8 138 aa12.18□□□□□ -0.46
COPS7B-214ENST00000449784 ZNF496Q96IT1 587 aaPredicted RBP12.18□□□□□ -0.46
COPS7B-214ENST00000449784 BABAM1Q9NWV8 329 aa12.18□□□□□ -0.46
COPS7B-214ENST00000449784 HEG1Q9ULI3 1381 aa12.18□□□□□ -0.46
COPS7B-214ENST00000449784 C4BP0C0L5 1744 aa12.17□□□□□ -0.46
COPS7B-214ENST00000449784 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
COPS7B-214ENST00000449784 TAF1LQ8IZX4 1826 aa12.17□□□□□ -0.46
COPS7B-214ENST00000449784 KCNQ3O43525 872 aa12.17□□□□□ -0.46
COPS7B-214ENST00000449784 CBLBQ13191 982 aa12.17□□□□□ -0.46
COPS7B-214ENST00000449784 FMNL2Q96PY5 1086 aa12.17□□□□□ -0.46
COPS7B-214ENST00000449784 ARHGAP9Q9BRR9 750 aa12.17□□□□□ -0.46
COPS7B-214ENST00000449784 TJP1Q07157 1748 aa12.17□□□□□ -0.46
COPS7B-214ENST00000449784 FIGNL2A6NMB9 653 aa12.16□□□□□ -0.46
COPS7B-214ENST00000449784 TSEN34Q9BSV6 310 aaKnown RBP12.16□□□□□ -0.46
COPS7B-214ENST00000449784 MIS18AQ9NYP9 233 aa12.16□□□□□ -0.46
COPS7B-214ENST00000449784 COL5A3P25940 1745 aaPredicted RBP12.16□□□□□ -0.46
COPS7B-214ENST00000449784 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
COPS7B-214ENST00000449784 CHL1O00533 1208 aa12.15□□□□□ -0.46
COPS7B-214ENST00000449784 VSIG8P0DPA2 414 aa12.15□□□□□ -0.46
COPS7B-214ENST00000449784 CALD1Q05682 793 aaKnown RBP12.15□□□□□ -0.46
COPS7B-214ENST00000449784 NR6A1Q15406 480 aa12.15□□□□□ -0.46
COPS7B-214ENST00000449784 PPP1R26Q5T8A7 1209 aaPredicted RBP12.15□□□□□ -0.46
COPS7B-214ENST00000449784 DNAJC10Q8IXB1 793 aa12.15□□□□□ -0.46
COPS7B-214ENST00000449784 NGEFQ8N5V2 710 aa12.15□□□□□ -0.46
COPS7B-214ENST00000449784 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
COPS7B-214ENST00000449784 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
COPS7B-214ENST00000449784 CYP19A1P11511 503 aaPredicted RBP12.14□□□□□ -0.47
COPS7B-214ENST00000449784 EIF4A1P60842 406 aaKnown RBP12.14□□□□□ -0.47
COPS7B-214ENST00000449784 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
COPS7B-214ENST00000449784 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
COPS7B-214ENST00000449784 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
COPS7B-214ENST00000449784 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
COPS7B-214ENST00000449784 TSPYL4Q9UJ04 414 aa12.14□□□□□ -0.47
COPS7B-214ENST00000449784 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
COPS7B-214ENST00000449784 CASZ1Q86V15 1759 aa12.13□□□□□ -0.47
COPS7B-214ENST00000449784 SSFA2P28290 1259 aa12.13□□□□□ -0.47
COPS7B-214ENST00000449784 CRKLP46109 303 aaKnown RBP12.13□□□□□ -0.47
COPS7B-214ENST00000449784 AMIGO3Q86WK7 504 aa12.13□□□□□ -0.47
COPS7B-214ENST00000449784 PROCA1Q8NCQ7 364 aaPredicted RBP12.13□□□□□ -0.47
COPS7B-214ENST00000449784 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
COPS7B-214ENST00000449784 TEX13AQ9BXU3 409 aaPredicted RBP12.13□□□□□ -0.47
COPS7B-214ENST00000449784 IFT57Q9NWB7 429 aa12.13□□□□□ -0.47
COPS7B-214ENST00000449784 FKBPLQ9UIM3 349 aa12.13□□□□□ -0.47
COPS7B-214ENST00000449784 SENP3-EIF4A1A0A087X0R7 540 aa12.12□□□□□ -0.47
COPS7B-214ENST00000449784 TTLL8A6PVC2 850 aa12.12□□□□□ -0.47
COPS7B-214ENST00000449784 SNRPA1P09661 255 aaKnown RBP12.12□□□□□ -0.47
COPS7B-214ENST00000449784 GNAI1P63096 354 aa12.12□□□□□ -0.47
COPS7B-214ENST00000449784 INTS5Q6P9B9 1019 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms