RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TRPM7Q96QT4 1865 aa19.3■□□□□ 0.68
CHD3-205ENST00000449744 PCNTO95613 3336 aa19.3■□□□□ 0.68
CHD3-205ENST00000449744 USP48Q86UV5 1035 aa19.29■□□□□ 0.68
CHD3-205ENST00000449744 EGFRP00533 1210 aa19.28■□□□□ 0.68
CHD3-205ENST00000449744 USP17L8P0C7I0 530 aa19.28■□□□□ 0.68
CHD3-205ENST00000449744 ALDH1L2Q3SY69 923 aa19.28■□□□□ 0.68
CHD3-205ENST00000449744 SUCLG2Q96I99 432 aa19.28■□□□□ 0.68
CHD3-205ENST00000449744 TLL2Q9Y6L7 1015 aa19.28■□□□□ 0.68
CHD3-205ENST00000449744 WDR33Q9C0J8 1336 aaKnown RBP19.27■□□□□ 0.68
CHD3-205ENST00000449744 ZNF609O15014 1411 aa19.27■□□□□ 0.68
CHD3-205ENST00000449744 ECE1P42892 770 aa19.27■□□□□ 0.68
CHD3-205ENST00000449744 LDHAL6AQ6ZMR3 332 aa19.27■□□□□ 0.68
CHD3-205ENST00000449744 KRT26Q7Z3Y9 468 aa19.27■□□□□ 0.68
CHD3-205ENST00000449744 TXNRD3Q86VQ6 643 aa19.27■□□□□ 0.68
CHD3-205ENST00000449744 AIDAQ96BJ3 306 aa19.27■□□□□ 0.68
CHD3-205ENST00000449744 CNNM1Q9NRU3 951 aa19.27■□□□□ 0.68
CHD3-205ENST00000449744 SMC4Q9NTJ3 1288 aa19.27■□□□□ 0.68
CHD3-205ENST00000449744 PSME4Q14997 1843 aa19.26■□□□□ 0.67
CHD3-205ENST00000449744 TAF5LO75529 589 aa19.26■□□□□ 0.67
CHD3-205ENST00000449744 NBPF7P0C2Y1 421 aaPredicted RBP19.26■□□□□ 0.67
CHD3-205ENST00000449744 KLRK1P26718 216 aa19.26■□□□□ 0.67
CHD3-205ENST00000449744 ZNF280AP59817 542 aaPredicted RBP19.26■□□□□ 0.67
CHD3-205ENST00000449744 GRM1Q13255 1194 aa19.26■□□□□ 0.67
CHD3-205ENST00000449744 HELBQ8NG08 1087 aaPredicted RBP19.26■□□□□ 0.67
CHD3-205ENST00000449744 ZNF594Q96JF6 807 aaPredicted RBP19.26■□□□□ 0.67
CHD3-205ENST00000449744 MYO3BQ8WXR4 1341 aa19.25■□□□□ 0.67
CHD3-205ENST00000449744 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
CHD3-205ENST00000449744 DACT2Q5SW24 774 aa19.25■□□□□ 0.67
CHD3-205ENST00000449744 STRIP1Q5VSL9 837 aa19.25■□□□□ 0.67
CHD3-205ENST00000449744 SULF1Q8IWU6 871 aa19.25■□□□□ 0.67
CHD3-205ENST00000449744 TRMT2AQ8IZ69 625 aaKnown RBP19.25■□□□□ 0.67
CHD3-205ENST00000449744 OGFOD1Q8N543 542 aa19.25■□□□□ 0.67
CHD3-205ENST00000449744 CAPNS2Q96L46 248 aa19.25■□□□□ 0.67
CHD3-205ENST00000449744 GMLQ99445 158 aa19.25■□□□□ 0.67
CHD3-205ENST00000449744 MYOZ2Q9NPC6 264 aa19.25■□□□□ 0.67
CHD3-205ENST00000449744 GGA3Q9NZ52 723 aa19.25■□□□□ 0.67
CHD3-205ENST00000449744 UTYO14607 1347 aa19.25■□□□□ 0.67
CHD3-205ENST00000449744 PLIN1O60240 522 aa19.24■□□□□ 0.67
CHD3-205ENST00000449744 SCARF1Q14162 830 aa19.24■□□□□ 0.67
CHD3-205ENST00000449744 TTLL5Q6EMB2 1281 aa19.24■□□□□ 0.67
CHD3-205ENST00000449744 CYP4F22Q6NT55 531 aa19.24■□□□□ 0.67
CHD3-205ENST00000449744 SAPCD2Q86UD0 394 aa19.24■□□□□ 0.67
CHD3-205ENST00000449744 ADM5C9JUS6 153 aa19.23■□□□□ 0.67
CHD3-205ENST00000449744 SNAP23O00161 211 aa19.23■□□□□ 0.67
CHD3-205ENST00000449744 MXD3Q9BW11 206 aa19.23■□□□□ 0.67
CHD3-205ENST00000449744 FOXN1O15353 648 aa19.22■□□□□ 0.67
CHD3-205ENST00000449744 GTF2IP78347 998 aa19.22■□□□□ 0.67
CHD3-205ENST00000449744 MAP2K1Q02750 393 aaPredicted RBP19.22■□□□□ 0.67
CHD3-205ENST00000449744 ANGEL2Q5VTE6 544 aaKnown RBP19.22■□□□□ 0.67
CHD3-205ENST00000449744 C15orf52Q6ZUT6 534 aaKnown RBP19.22■□□□□ 0.67
CHD3-205ENST00000449744 ZNF804AQ7Z570 1209 aa19.22■□□□□ 0.67
CHD3-205ENST00000449744 KAZALD1Q96I82 304 aa19.22■□□□□ 0.67
CHD3-205ENST00000449744 BICC1Q9H694 974 aaKnown RBP19.22■□□□□ 0.67
CHD3-205ENST00000449744 CD209Q9NNX6 404 aa19.22■□□□□ 0.67
CHD3-205ENST00000449744 DLK2Q6UY11 383 aa19.21■□□□□ 0.67
CHD3-205ENST00000449744 C2orf69Q8N8R5 385 aa19.21■□□□□ 0.67
CHD3-205ENST00000449744 HHIPL1Q96JK4 782 aa19.21■□□□□ 0.67
CHD3-205ENST00000449744 WBP1LQ9NX94 342 aa19.21■□□□□ 0.67
CHD3-205ENST00000449744 HDAC9Q9UKV0 1011 aa19.21■□□□□ 0.67
CHD3-205ENST00000449744 ASTN2O75129 1339 aaPredicted RBP19.21■□□□□ 0.67
CHD3-205ENST00000449744 CTCFP49711 727 aaPredicted RBP19.2■□□□□ 0.66
CHD3-205ENST00000449744 MMP14P50281 582 aa19.2■□□□□ 0.66
CHD3-205ENST00000449744 RABL6Q3YEC7 729 aaPredicted RBP19.2■□□□□ 0.66
CHD3-205ENST00000449744 GBA2Q9HCG7 927 aaPredicted RBP19.2■□□□□ 0.66
CHD3-205ENST00000449744 POLR2AP24928 1970 aaKnown RBP19.19■□□□□ 0.66
CHD3-205ENST00000449744 HUNKP57058 714 aa19.19■□□□□ 0.66
CHD3-205ENST00000449744 DIEXFQ68CQ4 756 aaKnown RBP19.19■□□□□ 0.66
CHD3-205ENST00000449744 BEGAINQ9BUH8 593 aa19.19■□□□□ 0.66
CHD3-205ENST00000449744 USP44Q9H0E7 712 aa19.19■□□□□ 0.66
CHD3-205ENST00000449744 NOB1Q9ULX3 412 aaKnown RBP19.19■□□□□ 0.66
CHD3-205ENST00000449744 A0A1B0GUL6 1792 aa19.19■□□□□ 0.66
CHD3-205ENST00000449744 UBE4AQ14139 1066 aa19.18■□□□□ 0.66
CHD3-205ENST00000449744 KIAA0825Q8IV33 1275 aa19.18■□□□□ 0.66
CHD3-205ENST00000449744 ANKRD44Q8N8A2 993 aa19.18■□□□□ 0.66
CHD3-205ENST00000449744 CDCA5Q96FF9 252 aa19.18■□□□□ 0.66
CHD3-205ENST00000449744 PUS3Q9BZE2 481 aaKnown RBP19.18■□□□□ 0.66
CHD3-205ENST00000449744 API5Q9BZZ5 524 aaKnown RBP19.18■□□□□ 0.66
CHD3-205ENST00000449744 MROH5Q6ZUA9 1318 aa19.18■□□□□ 0.66
CHD3-205ENST00000449744 PITPNM2Q9BZ72 1349 aa19.18■□□□□ 0.66
CHD3-205ENST00000449744 IRS2Q9Y4H2 1338 aa19.18■□□□□ 0.66
CHD3-205ENST00000449744 AOC2O75106 756 aa19.17■□□□□ 0.66
CHD3-205ENST00000449744 IL1R1P14778 569 aa19.17■□□□□ 0.66
CHD3-205ENST00000449744 MAP2K2P36507 400 aa19.17■□□□□ 0.66
CHD3-205ENST00000449744 NBPF9Q3BBW0 867 aa19.17■□□□□ 0.66
CHD3-205ENST00000449744 PRDM10Q9NQV6 1147 aa19.17■□□□□ 0.66
CHD3-205ENST00000449744 WNT10BO00744 389 aa19.16■□□□□ 0.66
CHD3-205ENST00000449744 MIER1Q8N108 512 aa19.16■□□□□ 0.66
CHD3-205ENST00000449744 RIPOR2Q9Y4F9 1068 aa19.16■□□□□ 0.66
CHD3-205ENST00000449744 RARSP54136 660 aaKnown RBP19.15■□□□□ 0.66
CHD3-205ENST00000449744 BRPF1P55201 1214 aaPredicted RBP19.15■□□□□ 0.66
CHD3-205ENST00000449744 METTL24Q5JXM2 366 aa19.15■□□□□ 0.66
CHD3-205ENST00000449744 ZNF646O15015 1829 aaPredicted RBP19.15■□□□□ 0.66
CHD3-205ENST00000449744 THSD7BQ9C0I4 1608 aa19.14■□□□□ 0.66
CHD3-205ENST00000449744 SASH1O94885 1247 aa19.14■□□□□ 0.65
CHD3-205ENST00000449744 UBTFL1P0CB47 393 aaPredicted RBP19.14■□□□□ 0.65
CHD3-205ENST00000449744 HIBADHP31937 336 aaKnown RBP19.14■□□□□ 0.65
CHD3-205ENST00000449744 LBX1P52954 281 aa19.14■□□□□ 0.65
CHD3-205ENST00000449744 RGMBQ6NW40 437 aa19.14■□□□□ 0.65
CHD3-205ENST00000449744 HDAC5Q9UQL6 1122 aa19.14■□□□□ 0.65
CHD3-205ENST00000449744 KIF16BQ96L93 1317 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms