RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PIM2Q9P1W9 311 aa17.89■□□□□ 0.45
TNF-208ENST00000449264 GGA1Q9UJY5 639 aa17.89■□□□□ 0.45
TNF-208ENST00000449264 AOX1Q06278 1338 aa17.89■□□□□ 0.45
TNF-208ENST00000449264 DUOX1Q9NRD9 1551 aa17.88■□□□□ 0.45
TNF-208ENST00000449264 ERC2O15083 957 aa17.88■□□□□ 0.45
TNF-208ENST00000449264 GSPT1P15170 499 aaKnown RBP17.88■□□□□ 0.45
TNF-208ENST00000449264 KLRK1P26718 216 aa17.88■□□□□ 0.45
TNF-208ENST00000449264 CCDC158Q5M9N0 1113 aa17.88■□□□□ 0.45
TNF-208ENST00000449264 TTC39AQ5SRH9 613 aa17.88■□□□□ 0.45
TNF-208ENST00000449264 MYH13Q9UKX3 1938 aa17.88■□□□□ 0.45
TNF-208ENST00000449264 C21orf2O43822 256 aa17.87■□□□□ 0.45
TNF-208ENST00000449264 DPP8Q6V1X1 898 aaPredicted RBP17.87■□□□□ 0.45
TNF-208ENST00000449264 MPNDQ8N594 471 aa17.87■□□□□ 0.45
TNF-208ENST00000449264 FHDC1Q9C0D6 1143 aaPredicted RBP17.87■□□□□ 0.45
TNF-208ENST00000449264 PODXL2Q9NZ53 605 aa17.87■□□□□ 0.45
TNF-208ENST00000449264 LEMD3Q9Y2U8 911 aa17.87■□□□□ 0.45
TNF-208ENST00000449264 C6orf229H3BNL8 230 aa17.87■□□□□ 0.45
TNF-208ENST00000449264 GLRX3O76003 335 aaKnown RBP17.87■□□□□ 0.45
TNF-208ENST00000449264 MAP4K4O95819 1239 aaPredicted RBP17.87■□□□□ 0.45
TNF-208ENST00000449264 ATP2B4P23634 1241 aa17.87■□□□□ 0.45
TNF-208ENST00000449264 PHKA1P46020 1223 aa17.87■□□□□ 0.45
TNF-208ENST00000449264 BOLA2Q9H3K6 86 aa17.87■□□□□ 0.45
TNF-208ENST00000449264 GYG1P46976 350 aa17.86■□□□□ 0.45
TNF-208ENST00000449264 DALRD3Q5D0E6 543 aaKnown RBP17.86■□□□□ 0.45
TNF-208ENST00000449264 CCDC102BQ68D86 513 aa17.86■□□□□ 0.45
TNF-208ENST00000449264 TBC1D16Q8TBP0 767 aa17.86■□□□□ 0.45
TNF-208ENST00000449264 POLLQ9UGP5 575 aa17.86■□□□□ 0.45
TNF-208ENST00000449264 TRIM6-TRIM34B2RNG4 842 aa17.85■□□□□ 0.45
TNF-208ENST00000449264 ATP5JP18859 108 aa17.85■□□□□ 0.45
TNF-208ENST00000449264 BCAMP50895 628 aa17.85■□□□□ 0.45
TNF-208ENST00000449264 BMP2KLQ5H9B9 411 aa17.85■□□□□ 0.45
TNF-208ENST00000449264 VPS37DQ86XT2 251 aa17.85■□□□□ 0.45
TNF-208ENST00000449264 PELP1Q8IZL8 1130 aaKnown RBP17.85■□□□□ 0.45
TNF-208ENST00000449264 C7orf43Q8WVR3 580 aa17.85■□□□□ 0.45
TNF-208ENST00000449264 DNAJC2Q99543 621 aaKnown RBP17.85■□□□□ 0.45
TNF-208ENST00000449264 NDUFB9Q9Y6M9 179 aa17.85■□□□□ 0.45
TNF-208ENST00000449264 AKAP11Q9UKA4 1901 aa17.84■□□□□ 0.45
TNF-208ENST00000449264 CAVIN4Q5BKX8 364 aa17.84■□□□□ 0.45
TNF-208ENST00000449264 TXNRD3Q86VQ6 643 aa17.84■□□□□ 0.45
TNF-208ENST00000449264 BCS1LQ9Y276 419 aa17.84■□□□□ 0.45
TNF-208ENST00000449264 CCDC93Q567U6 631 aa17.83■□□□□ 0.45
TNF-208ENST00000449264 SCARF1Q14162 830 aa17.83■□□□□ 0.44
TNF-208ENST00000449264 CC2D2BQ6DHV5 1058 aa17.83■□□□□ 0.44
TNF-208ENST00000449264 RILPL2Q969X0 211 aa17.83■□□□□ 0.44
TNF-208ENST00000449264 FAM84BQ96KN1 310 aaPredicted RBP17.83■□□□□ 0.44
TNF-208ENST00000449264 SNRKQ9NRH2 765 aa17.83■□□□□ 0.44
TNF-208ENST00000449264 IQSEC3Q9UPP2 1182 aaPredicted RBP17.83■□□□□ 0.44
TNF-208ENST00000449264 ARFGEF1Q9Y6D6 1849 aa17.83■□□□□ 0.44
TNF-208ENST00000449264 SNED1Q8TER0 1413 aa17.82■□□□□ 0.44
TNF-208ENST00000449264 MED23Q9ULK4 1368 aa17.82■□□□□ 0.44
TNF-208ENST00000449264 IRS2Q9Y4H2 1338 aa17.82■□□□□ 0.44
TNF-208ENST00000449264 RIMBP2O15034 1052 aa17.82■□□□□ 0.44
TNF-208ENST00000449264 UQCRFS1P1P0C7P4 283 aa17.82■□□□□ 0.44
TNF-208ENST00000449264 SDSP20132 328 aa17.82■□□□□ 0.44
TNF-208ENST00000449264 ARID4AP29374 1257 aaPredicted RBP17.82■□□□□ 0.44
TNF-208ENST00000449264 MCAMP43121 646 aa17.82■□□□□ 0.44
TNF-208ENST00000449264 PI16Q6UXB8 463 aa17.82■□□□□ 0.44
TNF-208ENST00000449264 HIBADHP31937 336 aaKnown RBP17.81■□□□□ 0.44
TNF-208ENST00000449264 FKBP4Q02790 459 aaKnown RBP eCLIP17.81■□□□□ 0.44
TNF-208ENST00000449264 EDC3Q96F86 508 aaKnown RBP17.81■□□□□ 0.44
TNF-208ENST00000449264 HAUS7Q99871 368 aa17.81■□□□□ 0.44
TNF-208ENST00000449264 GNL3LQ9NVN8 582 aaKnown RBP17.81■□□□□ 0.44
TNF-208ENST00000449264 RASGRF1Q13972 1273 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 SOGA3Q5TF21 947 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 ZNF804AQ7Z570 1209 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 CNTROBQ8N137 903 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.8■□□□□ 0.44
TNF-208ENST00000449264 SYT17Q9BSW7 474 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 GOLIM4O00461 696 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 FRAT2O75474 233 aaPredicted RBP17.8■□□□□ 0.44
TNF-208ENST00000449264 WASHC4Q2M389 1173 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 FBXO33Q7Z6M2 555 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 RTKN2Q8IZC4 609 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 ZNF512BQ96KM6 892 aaPredicted RBP17.8■□□□□ 0.44
TNF-208ENST00000449264 EYA3Q99504 573 aa17.8■□□□□ 0.44
TNF-208ENST00000449264 COL1A1P02452 1464 aaPredicted RBP17.79■□□□□ 0.44
TNF-208ENST00000449264 MYO5AQ9Y4I1 1855 aaKnown RBP17.79■□□□□ 0.44
TNF-208ENST00000449264 C15orf52Q6ZUT6 534 aaKnown RBP17.79■□□□□ 0.44
TNF-208ENST00000449264 ZC3H12CQ9C0D7 883 aaKnown RBP17.79■□□□□ 0.44
TNF-208ENST00000449264 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
TNF-208ENST00000449264 ZAP70P43403 619 aa17.78■□□□□ 0.44
TNF-208ENST00000449264 SPATA5Q8NB90 893 aa17.78■□□□□ 0.44
TNF-208ENST00000449264 RTFDC1Q9BY42 306 aaPredicted RBP17.78■□□□□ 0.44
TNF-208ENST00000449264 HMG20BQ9P0W2 317 aa17.78■□□□□ 0.44
TNF-208ENST00000449264 MYH7P12883 1935 aa17.78■□□□□ 0.44
TNF-208ENST00000449264 GRIPAP1Q4V328 841 aa17.77■□□□□ 0.44
TNF-208ENST00000449264 SUPT20HQ8NEM7 779 aa17.77■□□□□ 0.44
TNF-208ENST00000449264 EVI5LQ96CN4 794 aa17.77■□□□□ 0.44
TNF-208ENST00000449264 FSD1Q9BTV5 496 aa17.77■□□□□ 0.44
TNF-208ENST00000449264 CHD4Q14839 1912 aa17.77■□□□□ 0.44
TNF-208ENST00000449264 G3V3G9 751 aa17.77■□□□□ 0.43
TNF-208ENST00000449264 CHAF1AQ13111 956 aaPredicted RBP17.77■□□□□ 0.43
TNF-208ENST00000449264 AOC3Q16853 763 aa17.77■□□□□ 0.43
TNF-208ENST00000449264 DCAF8Q5TAQ9 597 aa17.77■□□□□ 0.43
TNF-208ENST00000449264 ANTXR1Q9H6X2 564 aa17.77■□□□□ 0.43
TNF-208ENST00000449264 JAG2Q9Y219 1238 aa17.77■□□□□ 0.43
TNF-208ENST00000449264 UTRNP46939 3433 aa17.76■□□□□ 0.43
TNF-208ENST00000449264 PPIP5K2O43314 1243 aa17.76■□□□□ 0.43
TNF-208ENST00000449264 DOK7Q18PE1 504 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms