RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 CCDC186Q7Z3E2 898 aa9.62□□□□□ -0.87
LINC00954-202ENST00000449086 TRERF1Q96PN7 1200 aa9.62□□□□□ -0.87
LINC00954-202ENST00000449086 ISCA1Q9BUE6 129 aa9.62□□□□□ -0.87
LINC00954-202ENST00000449086 SRP68Q9UHB9 627 aaKnown RBP9.62□□□□□ -0.87
LINC00954-202ENST00000449086 TNNT1P13805 278 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 INTS4Q96HW7 963 aaKnown RBP9.61□□□□□ -0.87
LINC00954-202ENST00000449086 OGFRQ9NZT2 677 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 NAP1L2Q9ULW6 460 aaPredicted RBP9.61□□□□□ -0.87
LINC00954-202ENST00000449086 PI4KAP2A4QPH2 592 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 ALDH1L1O75891 902 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 DNM1Q05193 864 aaKnown RBP9.61□□□□□ -0.87
LINC00954-202ENST00000449086 TPD52L1Q16890 204 aaPredicted RBP9.61□□□□□ -0.87
LINC00954-202ENST00000449086 PI4KAP1Q8N8J0 262 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 CCDC112Q8NEF3 446 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 LINS1Q8NG48 757 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 FEZ1Q99689 392 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 ZBTB3Q9H5J0 574 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 SMC3Q9UQE7 1217 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 MAP3K2Q9Y2U5 619 aa9.61□□□□□ -0.87
LINC00954-202ENST00000449086 STX6O43752 255 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 HLFQ16534 295 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 LUZP1Q86V48 1076 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 CKAP2LQ8IYA6 745 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 CCDC191Q8NCU4 936 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 ANKRD7Q92527 254 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 TRIM5Q9C035 493 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 NYXQ9GZU5 481 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 TMEM51Q9NW97 253 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 CCDC192P0DO97 292 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 ZSCAN22P10073 491 aaPredicted RBP9.6□□□□□ -0.87
LINC00954-202ENST00000449086 CPA1P15085 419 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 SYT1P21579 422 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 CCT4P50991 539 aaKnown RBP9.6□□□□□ -0.87
LINC00954-202ENST00000449086 SETDB2Q96T68 719 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 NRBP1Q9UHY1 535 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 LAMB2P55268 1798 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 POLD1P28340 1107 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 NFIXQ14938 502 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 TBC1D9BQ66K14 1250 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 PPP1R42Q7Z4L9 355 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 FERMT3Q86UX7 667 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 SGIP1Q9BQI5 828 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 IL1RAPL2Q9NP60 686 aa9.6□□□□□ -0.87
LINC00954-202ENST00000449086 AFDNP55196 1824 aaKnown RBP9.59□□□□□ -0.87
LINC00954-202ENST00000449086 PSDA5PKW4 1024 aaPredicted RBP9.59□□□□□ -0.87
LINC00954-202ENST00000449086 HSP90B1P14625 803 aaKnown RBP9.59□□□□□ -0.87
LINC00954-202ENST00000449086 BEND3Q5T5X7 828 aa9.59□□□□□ -0.87
LINC00954-202ENST00000449086 SMIM5Q71RC9 77 aa9.59□□□□□ -0.87
LINC00954-202ENST00000449086 SPON1Q9HCB6 807 aa9.59□□□□□ -0.87
LINC00954-202ENST00000449086 KIF13BQ9NQT8 1826 aa9.59□□□□□ -0.87
LINC00954-202ENST00000449086 GOLGA6L4A6NEF3 574 aa9.59□□□□□ -0.87
LINC00954-202ENST00000449086 POLRMTO00411 1230 aaKnown RBP9.59□□□□□ -0.87
LINC00954-202ENST00000449086 CHMLP26374 656 aa9.59□□□□□ -0.87
LINC00954-202ENST00000449086 TAF3Q5VWG9 929 aa9.59□□□□□ -0.87
LINC00954-202ENST00000449086 NLRP10Q86W26 655 aa9.59□□□□□ -0.87
LINC00954-202ENST00000449086 NIP7Q9Y221 180 aaKnown RBP eCLIP9.59□□□□□ -0.87
LINC00954-202ENST00000449086 ATP6V1DQ9Y5K8 247 aa9.59□□□□□ -0.87
LINC00954-202ENST00000449086 PARP3Q9Y6F1 533 aa9.59□□□□□ -0.87
LINC00954-202ENST00000449086 TPM3P06753 285 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 CCDC83Q8IWF9 413 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 MYD88Q99836 296 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 LRRCC1Q9C099 1032 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 CWC25Q9NXE8 425 aaPredicted RBP9.58□□□□□ -0.88
LINC00954-202ENST00000449086 NEURL1BA8MQ27 555 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 F13A1P00488 732 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 FAM173BQ6P4H8 233 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 CTNNA3Q9UI47 895 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 UTYO14607 1347 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 UBN2Q6ZU65 1347 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 CDHR2Q9BYE9 1310 aa9.58□□□□□ -0.88
LINC00954-202ENST00000449086 C10orf71Q711Q0 1435 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 CTIFO43310 598 aaKnown RBP9.57□□□□□ -0.88
LINC00954-202ENST00000449086 IGKV5-2P06315 115 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 MMP10P09238 476 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 TPTE2Q6XPS3 522 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 UTP14AQ9BVJ6 771 aaKnown RBP9.57□□□□□ -0.88
LINC00954-202ENST00000449086 PDGFDQ9GZP0 370 aaPredicted RBP9.57□□□□□ -0.88
LINC00954-202ENST00000449086 HDAC5Q9UQL6 1122 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 PNMA6EA0A0J9YXQ4 647 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 NTSR2O95665 410 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 PCCAP05165 728 aaPredicted RBP9.57□□□□□ -0.88
LINC00954-202ENST00000449086 PTGER2P43116 358 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 AK2P54819 239 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 DDR1Q08345 913 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 IL25Q9H293 177 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 ZBTB7AO95365 584 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 SERPINB2P05120 415 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 ANAPC15P60006 121 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 SLC10A5Q5PT55 438 aa9.57□□□□□ -0.88
LINC00954-202ENST00000449086 ZBTB38Q8NAP3 1195 aaPredicted RBP9.57□□□□□ -0.88
LINC00954-202ENST00000449086 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.57□□□□□ -0.88
LINC00954-202ENST00000449086 CCDC66A2RUB6 948 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 SMTNL1A8MU46 457 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 GJB2P29033 226 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 ST5P78524 1137 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 GCKRQ14397 625 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 CASTP20810 708 aaKnown RBP9.56□□□□□ -0.88
LINC00954-202ENST00000449086 MAP3K11Q16584 847 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 ANO6Q4KMQ2 910 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms