RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ECHDC1Q9NTX5 307 aa17.22■□□□□ 0.35
SHMT2-203ENST00000449049 KCNJ4P48050 445 aa17.21■□□□□ 0.35
SHMT2-203ENST00000449049 DALRD3Q5D0E6 543 aaKnown RBP17.21■□□□□ 0.35
SHMT2-203ENST00000449049 GGA1Q9UJY5 639 aa17.21■□□□□ 0.35
SHMT2-203ENST00000449049 GRIPAP1Q4V328 841 aa17.21■□□□□ 0.35
SHMT2-203ENST00000449049 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
SHMT2-203ENST00000449049 MPNDQ8N594 471 aa17.21■□□□□ 0.35
SHMT2-203ENST00000449049 TBC1D16Q8TBP0 767 aa17.21■□□□□ 0.35
SHMT2-203ENST00000449049 PI4K2BQ8TCG2 481 aa17.21■□□□□ 0.35
SHMT2-203ENST00000449049 ARFGEF1Q9Y6D6 1849 aa17.2■□□□□ 0.34
SHMT2-203ENST00000449049 C21orf2O43822 256 aa17.2■□□□□ 0.34
SHMT2-203ENST00000449049 UFL1O94874 794 aa17.2■□□□□ 0.34
SHMT2-203ENST00000449049 TSHZ3Q63HK5 1081 aa17.2■□□□□ 0.34
SHMT2-203ENST00000449049 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
SHMT2-203ENST00000449049 SYT17Q9BSW7 474 aa17.2■□□□□ 0.34
SHMT2-203ENST00000449049 POLLQ9UGP5 575 aa17.2■□□□□ 0.34
SHMT2-203ENST00000449049 MED23Q9ULK4 1368 aa17.19■□□□□ 0.34
SHMT2-203ENST00000449049 ATP5JP18859 108 aa17.19■□□□□ 0.34
SHMT2-203ENST00000449049 CCDC93Q567U6 631 aa17.19■□□□□ 0.34
SHMT2-203ENST00000449049 SOGA3Q5TF21 947 aa17.19■□□□□ 0.34
SHMT2-203ENST00000449049 RTFDC1Q9BY42 306 aaPredicted RBP17.19■□□□□ 0.34
SHMT2-203ENST00000449049 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
SHMT2-203ENST00000449049 ERC2O15083 957 aa17.18■□□□□ 0.34
SHMT2-203ENST00000449049 KLRK1P26718 216 aa17.18■□□□□ 0.34
SHMT2-203ENST00000449049 CCDC158Q5M9N0 1113 aa17.18■□□□□ 0.34
SHMT2-203ENST00000449049 GORABQ5T7V8 394 aa17.18■□□□□ 0.34
SHMT2-203ENST00000449049 TTC22Q5TAA0 569 aa17.18■□□□□ 0.34
SHMT2-203ENST00000449049 ZNF512BQ96KM6 892 aaPredicted RBP17.18■□□□□ 0.34
SHMT2-203ENST00000449049 GLRX3O76003 335 aaKnown RBP17.18■□□□□ 0.34
SHMT2-203ENST00000449049 CCDC102BQ68D86 513 aa17.18■□□□□ 0.34
SHMT2-203ENST00000449049 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.18■□□□□ 0.34
SHMT2-203ENST00000449049 PHKA1P46020 1223 aa17.17■□□□□ 0.34
SHMT2-203ENST00000449049 FBXO33Q7Z6M2 555 aa17.17■□□□□ 0.34
SHMT2-203ENST00000449049 RTKN2Q8IZC4 609 aa17.17■□□□□ 0.34
SHMT2-203ENST00000449049 FAM84BQ96KN1 310 aaPredicted RBP17.17■□□□□ 0.34
SHMT2-203ENST00000449049 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
SHMT2-203ENST00000449049 GSPT1P15170 499 aaKnown RBP17.17■□□□□ 0.34
SHMT2-203ENST00000449049 ARID4AP29374 1257 aaPredicted RBP17.17■□□□□ 0.34
SHMT2-203ENST00000449049 GYG1P46976 350 aa17.17■□□□□ 0.34
SHMT2-203ENST00000449049 CAVIN4Q5BKX8 364 aa17.17■□□□□ 0.34
SHMT2-203ENST00000449049 TTC39AQ5SRH9 613 aa17.17■□□□□ 0.34
SHMT2-203ENST00000449049 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
SHMT2-203ENST00000449049 FER1L6Q2WGJ9 1857 aa17.16■□□□□ 0.34
SHMT2-203ENST00000449049 ZBTB22O15209 634 aa17.16■□□□□ 0.34
SHMT2-203ENST00000449049 BCAMP50895 628 aa17.16■□□□□ 0.34
SHMT2-203ENST00000449049 GPR101Q96P66 508 aaPredicted RBP17.16■□□□□ 0.34
SHMT2-203ENST00000449049 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
SHMT2-203ENST00000449049 UQCRFS1P1P0C7P4 283 aa17.15■□□□□ 0.34
SHMT2-203ENST00000449049 BMP2KLQ5H9B9 411 aa17.15■□□□□ 0.34
SHMT2-203ENST00000449049 PSMD1Q99460 953 aa17.15■□□□□ 0.34
SHMT2-203ENST00000449049 TSHZ2Q9NRE2 1034 aa17.15■□□□□ 0.34
SHMT2-203ENST00000449049 WWC3Q9ULE0 1092 aa17.15■□□□□ 0.34
SHMT2-203ENST00000449049 SUPT20HQ8NEM7 779 aa17.15■□□□□ 0.34
SHMT2-203ENST00000449049 EYA3Q99504 573 aa17.15■□□□□ 0.34
SHMT2-203ENST00000449049 AKAP11Q9UKA4 1901 aa17.14■□□□□ 0.34
SHMT2-203ENST00000449049 HIBADHP31937 336 aaKnown RBP17.14■□□□□ 0.33
SHMT2-203ENST00000449049 HAUS7Q99871 368 aa17.14■□□□□ 0.33
SHMT2-203ENST00000449049 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.33
SHMT2-203ENST00000449049 SCARF1Q14162 830 aa17.14■□□□□ 0.33
SHMT2-203ENST00000449049 ZNF804AQ7Z570 1209 aa17.14■□□□□ 0.33
SHMT2-203ENST00000449049 GNL3LQ9NVN8 582 aaKnown RBP17.14■□□□□ 0.33
SHMT2-203ENST00000449049 MCAMP43121 646 aa17.13■□□□□ 0.33
SHMT2-203ENST00000449049 FKBP4Q02790 459 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHMT2-203ENST00000449049 WASHC4Q2M389 1173 aa17.13■□□□□ 0.33
SHMT2-203ENST00000449049 VPS37DQ86XT2 251 aa17.13■□□□□ 0.33
SHMT2-203ENST00000449049 MYH13Q9UKX3 1938 aa17.12■□□□□ 0.33
SHMT2-203ENST00000449049 ZC3H12CQ9C0D7 883 aaKnown RBP17.12■□□□□ 0.33
SHMT2-203ENST00000449049 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
SHMT2-203ENST00000449049 SEMA3EO15041 775 aa17.12■□□□□ 0.33
SHMT2-203ENST00000449049 RASGRF1Q13972 1273 aa17.12■□□□□ 0.33
SHMT2-203ENST00000449049 ANP32EQ9BTT0 268 aa17.12■□□□□ 0.33
SHMT2-203ENST00000449049 PDS5AQ29RF7 1337 aaKnown RBP17.11■□□□□ 0.33
SHMT2-203ENST00000449049 KIAA2012Q0VF49 1180 aa17.11■□□□□ 0.33
SHMT2-203ENST00000449049 TDRD7Q8NHU6 1098 aaKnown RBP17.11■□□□□ 0.33
SHMT2-203ENST00000449049 VPS33BQ9H267 617 aa17.11■□□□□ 0.33
SHMT2-203ENST00000449049 HMG20BQ9P0W2 317 aa17.11■□□□□ 0.33
SHMT2-203ENST00000449049 LTBP3Q9NS15 1303 aa17.11■□□□□ 0.33
SHMT2-203ENST00000449049 RIMBP2O15034 1052 aa17.11■□□□□ 0.33
SHMT2-203ENST00000449049 IL1R1P14778 569 aa17.11■□□□□ 0.33
SHMT2-203ENST00000449049 SDSP20132 328 aa17.11■□□□□ 0.33
SHMT2-203ENST00000449049 SPATA5Q8NB90 893 aa17.11■□□□□ 0.33
SHMT2-203ENST00000449049 COA1Q9GZY4 146 aa17.11■□□□□ 0.33
SHMT2-203ENST00000449049 CD209Q9NNX6 404 aa17.11■□□□□ 0.33
SHMT2-203ENST00000449049 AK9Q5TCS8 1911 aa17.1■□□□□ 0.33
SHMT2-203ENST00000449049 NFKBIEO00221 500 aa17.1■□□□□ 0.33
SHMT2-203ENST00000449049 MAP4K4O95819 1239 aaPredicted RBP17.1■□□□□ 0.33
SHMT2-203ENST00000449049 PI16Q6UXB8 463 aa17.1■□□□□ 0.33
SHMT2-203ENST00000449049 DNAJC2Q99543 621 aaKnown RBP17.1■□□□□ 0.33
SHMT2-203ENST00000449049 TAOK3Q9H2K8 898 aa17.1■□□□□ 0.33
SHMT2-203ENST00000449049 DENND2AQ9ULE3 1009 aa17.1■□□□□ 0.33
SHMT2-203ENST00000449049 NDUFB9Q9Y6M9 179 aa17.1■□□□□ 0.33
SHMT2-203ENST00000449049 ZAP70P43403 619 aa17.09■□□□□ 0.33
SHMT2-203ENST00000449049 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
SHMT2-203ENST00000449049 EVI5LQ96CN4 794 aa17.09■□□□□ 0.33
SHMT2-203ENST00000449049 PAG1Q9NWQ8 432 aa17.09■□□□□ 0.33
SHMT2-203ENST00000449049 TRIM6-TRIM34B2RNG4 842 aa17.09■□□□□ 0.33
SHMT2-203ENST00000449049 AOC3Q16853 763 aa17.09■□□□□ 0.33
SHMT2-203ENST00000449049 SNRKQ9NRH2 765 aa17.09■□□□□ 0.33
SHMT2-203ENST00000449049 IQSEC3Q9UPP2 1182 aaPredicted RBP17.09■□□□□ 0.33
SHMT2-203ENST00000449049 DOCK2Q92608 1830 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms