RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ANKRD18AQ8IVF6 992 aa18.39■□□□□ 0.53
USP39-206ENST00000448971 CDC5LQ99459 802 aaKnown RBP18.39■□□□□ 0.53
USP39-206ENST00000448971 MCOLN1Q9GZU1 580 aa18.39■□□□□ 0.53
USP39-206ENST00000448971 DBNDD1Q9H9R9 158 aa18.39■□□□□ 0.53
USP39-206ENST00000448971 SLC34A2O95436 690 aa18.38■□□□□ 0.53
USP39-206ENST00000448971 RPS8P62241 208 aaKnown RBP18.38■□□□□ 0.53
USP39-206ENST00000448971 GPSM2P81274 684 aa18.38■□□□□ 0.53
USP39-206ENST00000448971 NOGQ13253 232 aa18.38■□□□□ 0.53
USP39-206ENST00000448971 TTLL11Q8NHH1 800 aa18.38■□□□□ 0.53
USP39-206ENST00000448971 PLA2G12BQ9BX93 195 aa18.38■□□□□ 0.53
USP39-206ENST00000448971 GREM2Q9H772 168 aa18.38■□□□□ 0.53
USP39-206ENST00000448971 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
USP39-206ENST00000448971 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
USP39-206ENST00000448971 RIMBP2O15034 1052 aa18.37■□□□□ 0.53
USP39-206ENST00000448971 HUNKP57058 714 aa18.37■□□□□ 0.53
USP39-206ENST00000448971 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
USP39-206ENST00000448971 RTL9Q8NET4 1388 aa18.37■□□□□ 0.53
USP39-206ENST00000448971 SPEF2Q9C093 1822 aa18.37■□□□□ 0.53
USP39-206ENST00000448971 FAM155AB1AL88 458 aaPredicted RBP18.36■□□□□ 0.53
USP39-206ENST00000448971 RPS12P25398 132 aaKnown RBP18.36■□□□□ 0.53
USP39-206ENST00000448971 TBC1D10BQ4KMP7 808 aaPredicted RBP18.36■□□□□ 0.53
USP39-206ENST00000448971 KRT26Q7Z3Y9 468 aa18.36■□□□□ 0.53
USP39-206ENST00000448971 C6orf229H3BNL8 230 aa18.35■□□□□ 0.53
USP39-206ENST00000448971 ITGA6P23229 1130 aa18.35■□□□□ 0.53
USP39-206ENST00000448971 DOK7Q18PE1 504 aa18.35■□□□□ 0.53
USP39-206ENST00000448971 TBC1D16Q8TBP0 767 aa18.35■□□□□ 0.53
USP39-206ENST00000448971 ECE2O60344 883 aa18.34■□□□□ 0.53
USP39-206ENST00000448971 VIL1P09327 827 aaKnown RBP18.34■□□□□ 0.53
USP39-206ENST00000448971 IGHMBP2P38935 993 aaKnown RBP18.34■□□□□ 0.53
USP39-206ENST00000448971 RGMBQ6NW40 437 aa18.34■□□□□ 0.53
USP39-206ENST00000448971 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
USP39-206ENST00000448971 GBA2Q9HCG7 927 aaPredicted RBP18.34■□□□□ 0.53
USP39-206ENST00000448971 ANKIB1Q9P2G1 1089 aa18.34■□□□□ 0.53
USP39-206ENST00000448971 TNRC18O15417 2968 aaPredicted RBP18.33■□□□□ 0.53
USP39-206ENST00000448971 SCN9AQ15858 1988 aa18.33■□□□□ 0.53
USP39-206ENST00000448971 PDE4DIPQ5VU43 2346 aa18.33■□□□□ 0.53
USP39-206ENST00000448971 NBPF7P0C2Y1 421 aaPredicted RBP18.33■□□□□ 0.52
USP39-206ENST00000448971 CCT4P50991 539 aaKnown RBP18.33■□□□□ 0.52
USP39-206ENST00000448971 DGKZQ13574 1117 aa18.33■□□□□ 0.52
USP39-206ENST00000448971 RBM26Q5T8P6 1007 aaKnown RBP18.33■□□□□ 0.52
USP39-206ENST00000448971 PODXL2Q9NZ53 605 aa18.33■□□□□ 0.52
USP39-206ENST00000448971 ANKRD18BA2A2Z9 1011 aa18.32■□□□□ 0.52
USP39-206ENST00000448971 ADM5C9JUS6 153 aa18.32■□□□□ 0.52
USP39-206ENST00000448971 BCAR3O75815 825 aa18.32■□□□□ 0.52
USP39-206ENST00000448971 UFL1O94874 794 aa18.32■□□□□ 0.52
USP39-206ENST00000448971 C2orf69Q8N8R5 385 aa18.32■□□□□ 0.52
USP39-206ENST00000448971 DCPSQ96C86 337 aaKnown RBP18.32■□□□□ 0.52
USP39-206ENST00000448971 SUCLG2Q96I99 432 aa18.32■□□□□ 0.52
USP39-206ENST00000448971 EYA3Q99504 573 aa18.32■□□□□ 0.52
USP39-206ENST00000448971 MPHOSPH8Q99549 860 aa18.32■□□□□ 0.52
USP39-206ENST00000448971 IPO8O15397 1037 aaKnown RBP18.31■□□□□ 0.52
USP39-206ENST00000448971 CSF1RP07333 972 aa18.31■□□□□ 0.52
USP39-206ENST00000448971 FOXO4P98177 505 aa18.31■□□□□ 0.52
USP39-206ENST00000448971 KIF23Q02241 960 aaPredicted RBP18.31■□□□□ 0.52
USP39-206ENST00000448971 IFIT5Q13325 482 aaKnown RBP18.31■□□□□ 0.52
USP39-206ENST00000448971 TAF7LQ5H9L4 462 aa18.31■□□□□ 0.52
USP39-206ENST00000448971 EPHA10Q5JZY3 1008 aa18.31■□□□□ 0.52
USP39-206ENST00000448971 LMBR1LQ6UX01 489 aa18.31■□□□□ 0.52
USP39-206ENST00000448971 CCDC102AQ96A19 550 aa18.31■□□□□ 0.52
USP39-206ENST00000448971 UTYO14607 1347 aa18.3■□□□□ 0.52
USP39-206ENST00000448971 XDHP47989 1333 aa18.3■□□□□ 0.52
USP39-206ENST00000448971 CCDC57Q2TAC2 916 aa18.3■□□□□ 0.52
USP39-206ENST00000448971 ARHGAP45Q92619 1136 aa18.3■□□□□ 0.52
USP39-206ENST00000448971 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
USP39-206ENST00000448971 BSDC1Q9NW68 430 aaPredicted RBP18.3■□□□□ 0.52
USP39-206ENST00000448971 SAGE1Q9NXZ1 904 aa18.3■□□□□ 0.52
USP39-206ENST00000448971 GGA1Q9UJY5 639 aa18.3■□□□□ 0.52
USP39-206ENST00000448971 ASTN2O75129 1339 aaPredicted RBP18.29■□□□□ 0.52
USP39-206ENST00000448971 ZNF157P51786 506 aaPredicted RBP18.29■□□□□ 0.52
USP39-206ENST00000448971 KIF4BQ2VIQ3 1234 aa18.29■□□□□ 0.52
USP39-206ENST00000448971 BICC1Q9H694 974 aaKnown RBP18.29■□□□□ 0.52
USP39-206ENST00000448971 RNF186Q9NXI6 227 aa18.29■□□□□ 0.52
USP39-206ENST00000448971 UBTFL1P0CB47 393 aaPredicted RBP18.28■□□□□ 0.52
USP39-206ENST00000448971 TRIM27P14373 513 aa18.28■□□□□ 0.52
USP39-206ENST00000448971 ZNF280AP59817 542 aaPredicted RBP18.28■□□□□ 0.52
USP39-206ENST00000448971 ZKSCAN2Q63HK3 967 aa18.28■□□□□ 0.52
USP39-206ENST00000448971 ATF7IPQ6VMQ6 1270 aa18.28■□□□□ 0.52
USP39-206ENST00000448971 CSRNP1Q96S65 589 aa18.28■□□□□ 0.52
USP39-206ENST00000448971 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.52
USP39-206ENST00000448971 GMLQ99445 158 aa18.27■□□□□ 0.52
USP39-206ENST00000448971 USP44Q9H0E7 712 aa18.27■□□□□ 0.52
USP39-206ENST00000448971 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
USP39-206ENST00000448971 AKAP11Q9UKA4 1901 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 G3V3G9 751 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 TRPA1O75762 1119 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 SLC10A3P09131 477 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 ATP2B4P23634 1241 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 SCARF1Q14162 830 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 DCAF8Q5TAQ9 597 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 SULF1Q8IWU6 871 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 KAZALD1Q96I82 304 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 MINPP1Q9UNW1 487 aa18.26■□□□□ 0.51
USP39-206ENST00000448971 RSBN1LQ6PCB5 846 aaPredicted RBP18.25■□□□□ 0.51
USP39-206ENST00000448971 FTSJ3Q8IY81 847 aaKnown RBP18.25■□□□□ 0.51
USP39-206ENST00000448971 CDCA5Q96FF9 252 aa18.25■□□□□ 0.51
USP39-206ENST00000448971 ZNF594Q96JF6 807 aaPredicted RBP18.25■□□□□ 0.51
USP39-206ENST00000448971 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
USP39-206ENST00000448971 TNNQ9UQP3 1299 aa18.25■□□□□ 0.51
USP39-206ENST00000448971 ZNF609O15014 1411 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms