RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 PKN2Q16513 984 aaKnown RBP23.22■■□□□ 1.31
CHCHD3-203ENST00000448878 IFT57Q9NWB7 429 aa23.22■■□□□ 1.31
CHCHD3-203ENST00000448878 MAP3K2Q9Y2U5 619 aa23.22■■□□□ 1.31
CHCHD3-203ENST00000448878 ZNF853P0CG23 659 aa23.21■■□□□ 1.31
CHCHD3-203ENST00000448878 CTSWP56202 376 aa23.21■■□□□ 1.31
CHCHD3-203ENST00000448878 CCDC30Q5VVM6 783 aa23.21■■□□□ 1.31
CHCHD3-203ENST00000448878 C8orf58Q8NAV2 365 aa23.21■■□□□ 1.31
CHCHD3-203ENST00000448878 MINPP1Q9UNW1 487 aa23.21■■□□□ 1.31
CHCHD3-203ENST00000448878 ZNF609O15014 1411 aa23.21■■□□□ 1.31
CHCHD3-203ENST00000448878 APAF1O14727 1248 aa23.2■■□□□ 1.3
CHCHD3-203ENST00000448878 WNT10BO00744 389 aa23.19■■□□□ 1.3
CHCHD3-203ENST00000448878 CCT4P50991 539 aaKnown RBP23.19■■□□□ 1.3
CHCHD3-203ENST00000448878 NEXNQ0ZGT2 675 aa23.19■■□□□ 1.3
CHCHD3-203ENST00000448878 CHMP4AQ9BY43 222 aa23.19■■□□□ 1.3
CHCHD3-203ENST00000448878 GREM2Q9H772 168 aa23.19■■□□□ 1.3
CHCHD3-203ENST00000448878 BSDC1Q9NW68 430 aaPredicted RBP23.19■■□□□ 1.3
CHCHD3-203ENST00000448878 PSME4Q14997 1843 aa23.19■■□□□ 1.3
CHCHD3-203ENST00000448878 MED23Q9ULK4 1368 aa23.18■■□□□ 1.3
CHCHD3-203ENST00000448878 GPR25O00155 361 aa23.18■■□□□ 1.3
CHCHD3-203ENST00000448878 SASH1O94885 1247 aa23.18■■□□□ 1.3
CHCHD3-203ENST00000448878 DACT2Q5SW24 774 aa23.18■■□□□ 1.3
CHCHD3-203ENST00000448878 PRPF38BQ5VTL8 546 aaKnown RBP23.18■■□□□ 1.3
CHCHD3-203ENST00000448878 TTLL11Q8NHH1 800 aa23.18■■□□□ 1.3
CHCHD3-203ENST00000448878 MYO3BQ8WXR4 1341 aa23.17■■□□□ 1.3
CHCHD3-203ENST00000448878 PI4KAP2A4QPH2 592 aa23.17■■□□□ 1.3
CHCHD3-203ENST00000448878 TM4SF4P48230 202 aa23.17■■□□□ 1.3
CHCHD3-203ENST00000448878 SREBF2Q12772 1141 aa23.17■■□□□ 1.3
CHCHD3-203ENST00000448878 ARMC9Q7Z3E5 817 aa23.17■■□□□ 1.3
CHCHD3-203ENST00000448878 PI4KAP1Q8N8J0 262 aa23.17■■□□□ 1.3
CHCHD3-203ENST00000448878 COA1Q9GZY4 146 aa23.17■■□□□ 1.3
CHCHD3-203ENST00000448878 IGHMBP2P38935 993 aaKnown RBP23.16■■□□□ 1.3
CHCHD3-203ENST00000448878 STRIP1Q5VSL9 837 aa23.16■■□□□ 1.3
CHCHD3-203ENST00000448878 TTLL5Q6EMB2 1281 aa23.16■■□□□ 1.3
CHCHD3-203ENST00000448878 KSR2Q6VAB6 950 aa23.16■■□□□ 1.3
CHCHD3-203ENST00000448878 SPEF2Q9C093 1822 aa23.15■■□□□ 1.3
CHCHD3-203ENST00000448878 IGKV5-2P06315 115 aa23.15■■□□□ 1.3
CHCHD3-203ENST00000448878 PTPN12Q05209 780 aaKnown RBP23.15■■□□□ 1.3
CHCHD3-203ENST00000448878 KIAA0825Q8IV33 1275 aa23.15■■□□□ 1.3
CHCHD3-203ENST00000448878 FKTNO75072 461 aa23.14■■□□□ 1.29
CHCHD3-203ENST00000448878 CWF19L2Q2TBE0 894 aaKnown RBP23.14■■□□□ 1.29
CHCHD3-203ENST00000448878 TXNRD3Q86VQ6 643 aa23.14■■□□□ 1.29
CHCHD3-203ENST00000448878 STK31Q9BXU1 1019 aa23.14■■□□□ 1.29
CHCHD3-203ENST00000448878 ANGEL1Q9UNK9 670 aaKnown RBP23.14■■□□□ 1.29
CHCHD3-203ENST00000448878 LEMD3Q9Y2U8 911 aa23.14■■□□□ 1.29
CHCHD3-203ENST00000448878 KCNJ4P48050 445 aa23.13■■□□□ 1.29
CHCHD3-203ENST00000448878 FBXO46Q6PJ61 603 aaPredicted RBP23.13■■□□□ 1.29
CHCHD3-203ENST00000448878 UBE3BQ7Z3V4 1068 aa23.13■■□□□ 1.29
CHCHD3-203ENST00000448878 APOBEC3FQ8IUX4 373 aaKnown RBP23.13■■□□□ 1.29
CHCHD3-203ENST00000448878 TSPYL6Q8N831 410 aa23.13■■□□□ 1.29
CHCHD3-203ENST00000448878 MPHOSPH8Q99549 860 aa23.13■■□□□ 1.29
CHCHD3-203ENST00000448878 GTF2IP78347 998 aa23.12■■□□□ 1.29
CHCHD3-203ENST00000448878 ZNF804BA4D1E1 1349 aa23.11■■□□□ 1.29
CHCHD3-203ENST00000448878 ANKRD2Q9GZV1 360 aa23.11■■□□□ 1.29
CHCHD3-203ENST00000448878 FZD1Q9UP38 647 aa23.11■■□□□ 1.29
CHCHD3-203ENST00000448878 PDE4DIPQ5VU43 2346 aa23.11■■□□□ 1.29
CHCHD3-203ENST00000448878 NEURL1BA8MQ27 555 aa23.1■■□□□ 1.29
CHCHD3-203ENST00000448878 SLC10A4Q96EP9 437 aa23.1■■□□□ 1.29
CHCHD3-203ENST00000448878 R3HDMLQ9H3Y0 253 aa23.1■■□□□ 1.29
CHCHD3-203ENST00000448878 ITGA6P23229 1130 aa23.09■■□□□ 1.29
CHCHD3-203ENST00000448878 KLRK1P26718 216 aa23.09■■□□□ 1.29
CHCHD3-203ENST00000448878 MMP14P50281 582 aa23.09■■□□□ 1.29
CHCHD3-203ENST00000448878 SPRYD7Q5W111 196 aa23.09■■□□□ 1.29
CHCHD3-203ENST00000448878 DLGAP5Q15398 846 aa23.08■■□□□ 1.29
CHCHD3-203ENST00000448878 NOM1Q5C9Z4 860 aaKnown RBP23.08■■□□□ 1.29
CHCHD3-203ENST00000448878 TSR2Q969E8 191 aaKnown RBP23.08■■□□□ 1.29
CHCHD3-203ENST00000448878 MYH3P11055 1940 aa23.08■■□□□ 1.28
CHCHD3-203ENST00000448878 H7C1W4 665 aa23.07■■□□□ 1.28
CHCHD3-203ENST00000448878 ALDH1A1P00352 501 aa23.07■■□□□ 1.28
CHCHD3-203ENST00000448878 DEFB129Q9H1M3 183 aa23.07■■□□□ 1.28
CHCHD3-203ENST00000448878 SLC4A2P04920 1241 aa23.06■■□□□ 1.28
CHCHD3-203ENST00000448878 LDLRAD1Q5T700 205 aa23.06■■□□□ 1.28
CHCHD3-203ENST00000448878 G2E3Q7L622 706 aa23.06■■□□□ 1.28
CHCHD3-203ENST00000448878 TRIM17Q9Y577 477 aa23.06■■□□□ 1.28
CHCHD3-203ENST00000448878 MANSC4A6NHS7 340 aaPredicted RBP23.05■■□□□ 1.28
CHCHD3-203ENST00000448878 F8W031 263 aaPredicted RBP23.05■■□□□ 1.28
CHCHD3-203ENST00000448878 PPP1R12BO60237 982 aaPredicted RBP23.05■■□□□ 1.28
CHCHD3-203ENST00000448878 CHRNDQ07001 517 aa23.05■■□□□ 1.28
CHCHD3-203ENST00000448878 PRKRIP1Q9H875 184 aaPredicted RBP23.05■■□□□ 1.28
CHCHD3-203ENST00000448878 CD209Q9NNX6 404 aa23.05■■□□□ 1.28
CHCHD3-203ENST00000448878 INHBEP58166 350 aa23.04■■□□□ 1.28
CHCHD3-203ENST00000448878 MYO1BO43795 1136 aa23.03■■□□□ 1.28
CHCHD3-203ENST00000448878 TAF5LO75529 589 aa23.03■■□□□ 1.28
CHCHD3-203ENST00000448878 GCKRQ14397 625 aa23.03■■□□□ 1.28
CHCHD3-203ENST00000448878 TWISTNBQ3B726 338 aaPredicted RBP23.03■■□□□ 1.28
CHCHD3-203ENST00000448878 IFNL1Q8IU54 200 aa23.03■■□□□ 1.28
CHCHD3-203ENST00000448878 HELBQ8NG08 1087 aaPredicted RBP23.03■■□□□ 1.28
CHCHD3-203ENST00000448878 CFHR5Q9BXR6 569 aa23.03■■□□□ 1.28
CHCHD3-203ENST00000448878 CHMP3Q9Y3E7 222 aa23.03■■□□□ 1.28
CHCHD3-203ENST00000448878 CLRN2A0PK11 232 aa23.02■■□□□ 1.28
CHCHD3-203ENST00000448878 ANKRD18BA2A2Z9 1011 aa23.02■■□□□ 1.28
CHCHD3-203ENST00000448878 SNAP23O00161 211 aa23.02■■□□□ 1.28
CHCHD3-203ENST00000448878 RBM5P52756 815 aaKnown RBP eCLIP23.02■■□□□ 1.28
CHCHD3-203ENST00000448878 ZBED3Q96IU2 234 aaPredicted RBP23.02■■□□□ 1.28
CHCHD3-203ENST00000448878 CLMNQ96JQ2 1002 aa23.02■■□□□ 1.28
CHCHD3-203ENST00000448878 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.28
CHCHD3-203ENST00000448878 VEZTQ9HBM0 779 aa23.02■■□□□ 1.28
CHCHD3-203ENST00000448878 ZNF646O15015 1829 aaPredicted RBP23.02■■□□□ 1.28
CHCHD3-203ENST00000448878 FKBP5Q13451 457 aaPredicted RBP23.01■■□□□ 1.27
CHCHD3-203ENST00000448878 WNK4Q96J92 1243 aa23.01■■□□□ 1.27
CHCHD3-203ENST00000448878 PCDHAC2Q9Y5I4 1007 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms