RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 SETDB2Q96T68 719 aa7.85□□□□□ -1.15
GTF3C3-205ENST00000448087 POP1Q99575 1024 aaKnown RBP7.85□□□□□ -1.15
GTF3C3-205ENST00000448087 ADAMTSL4Q6UY14 1074 aa7.84□□□□□ -1.15
GTF3C3-205ENST00000448087 EPS8L3Q8TE67 593 aaKnown RBP7.84□□□□□ -1.15
GTF3C3-205ENST00000448087 WWC3Q9ULE0 1092 aa7.84□□□□□ -1.15
GTF3C3-205ENST00000448087 A0A1W2PP55 124 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 PDE2AO00408 941 aaPredicted RBP7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 TMEM102Q8N9M5 508 aaPredicted RBP7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 LACRTQ9GZZ8 138 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 PIK3R2O00459 728 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 ERCC3P19447 782 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 BAG6P46379 1132 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 COL19A1Q14993 1142 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 MSL1Q68DK7 614 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 PI16Q6UXB8 463 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 IL22RA1Q8N6P7 574 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 NXPE3Q969Y0 559 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 SUV39H2Q9H5I1 410 aa7.83□□□□□ -1.16
GTF3C3-205ENST00000448087 KIAA0319Q5VV43 1072 aa7.82□□□□□ -1.16
GTF3C3-205ENST00000448087 WFDC8Q8IUA0 241 aa7.82□□□□□ -1.16
GTF3C3-205ENST00000448087 LDHBP07195 334 aaKnown RBP7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 ATP2B2Q01814 1243 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 EAPPQ56P03 285 aaPredicted RBP7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 ALG1LQ6GMV1 187 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 DMRTC2Q8IXT2 367 aaPredicted RBP7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 EHD4Q9H223 541 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 LIN7BQ9HAP6 207 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 GADD45BO75293 160 aaPredicted RBP7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 PTPRAP18433 802 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 TRAPPC3LQ5T215 181 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 ILDR2Q71H61 639 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 CACTIN-AS1Q8N1I8 211 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 FBF1Q8TES7 1133 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 TCF12Q99081 682 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 BHLHE41Q9C0J9 482 aaPredicted RBP7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 SH2B1Q9NRF2 756 aaPredicted RBP7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 NLRP2Q9NX02 1062 aa7.81□□□□□ -1.16
GTF3C3-205ENST00000448087 METTL12A8MUP2 240 aa7.8□□□□□ -1.16
GTF3C3-205ENST00000448087 FBXO33Q7Z6M2 555 aa7.8□□□□□ -1.16
GTF3C3-205ENST00000448087 CCNJLQ8IV13 435 aa7.8□□□□□ -1.16
GTF3C3-205ENST00000448087 ASAP3Q8TDY4 903 aa7.8□□□□□ -1.16
GTF3C3-205ENST00000448087 ADAM19Q9H013 955 aa7.8□□□□□ -1.16
GTF3C3-205ENST00000448087 NOP53Q9NZM5 478 aaKnown RBP7.8□□□□□ -1.16
GTF3C3-205ENST00000448087 RNF225M0QZC1 329 aaPredicted RBP7.79□□□□□ -1.16
GTF3C3-205ENST00000448087 COL8A1P27658 744 aa7.79□□□□□ -1.16
GTF3C3-205ENST00000448087 CDC27P30260 824 aa7.79□□□□□ -1.16
GTF3C3-205ENST00000448087 GRM2Q14416 872 aa7.79□□□□□ -1.16
GTF3C3-205ENST00000448087 SPDYE3A6NKU9 549 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 FAM229AH3BQW9 127 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 EPHA1P21709 976 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 GRIA4P48058 902 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 BSNDQ8WZ55 320 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 PPME1Q9Y570 386 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 A0A0A0MRY4 1105 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 FAM177BA6PVY3 158 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 PRPF40AO75400 957 aaKnown RBP7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 CDC25BP30305 580 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 TXNDC11Q6PKC3 985 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 BCO2Q9BYV7 579 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 SOX13Q9UN79 622 aa7.78□□□□□ -1.16
GTF3C3-205ENST00000448087 LINC01387J3KSC0 135 aa7.77□□□□□ -1.17
GTF3C3-205ENST00000448087 TAGLNQ01995 201 aaKnown RBP7.77□□□□□ -1.17
GTF3C3-205ENST00000448087 SPRED3Q2MJR0 410 aa7.77□□□□□ -1.17
GTF3C3-205ENST00000448087 GLIS3Q8NEA6 775 aa7.77□□□□□ -1.17
GTF3C3-205ENST00000448087 A0A096LPE4 126 aa7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 A0A1W2PPZ6 126 aa7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 TRIM28Q13263 835 aaKnown RBP7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 PRPF40BQ6NWY9 871 aaKnown RBP7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 NXPE4Q6UWF7 544 aa7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 VN1R5Q7Z5H4 357 aa7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 DUSP9Q99956 384 aaKnown RBP7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 MUC3BQ9H195 1237 aa7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 ABCB6Q9NP58 842 aa7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 RNF19AQ9NV58 838 aa7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 TRAK1Q9UPV9 953 aa7.76□□□□□ -1.17
GTF3C3-205ENST00000448087 DEAF1O75398 565 aaPredicted RBP7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 GSK3AP49840 483 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 RAC1P63000 192 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 FGD1P98174 961 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 PRRT3Q5FWE3 981 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 DTWD1Q8N5C7 304 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 BCL2L13Q9BXK5 485 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 OSBPL7Q9BZF2 842 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 SPG7Q9UQ90 795 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 CABP4P57796 275 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 KCNMA1Q12791 1236 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 FMR1NBQ8N0W7 255 aaPredicted RBP7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 PODXL2Q9NZ53 605 aa7.75□□□□□ -1.17
GTF3C3-205ENST00000448087 TMEM238LA0A1B0GVL6 79 aa7.74□□□□□ -1.17
GTF3C3-205ENST00000448087 H3BRJ5 948 aa7.74□□□□□ -1.17
GTF3C3-205ENST00000448087 SPATA31C1P0DKV0 1188 aa7.74□□□□□ -1.17
GTF3C3-205ENST00000448087 SETDB1Q15047 1291 aa7.74□□□□□ -1.17
GTF3C3-205ENST00000448087 CCDC9Q9Y3X0 531 aaKnown RBP7.74□□□□□ -1.17
GTF3C3-205ENST00000448087 GNA15P30679 374 aa7.73□□□□□ -1.17
GTF3C3-205ENST00000448087 FCGRTP55899 365 aa7.73□□□□□ -1.17
GTF3C3-205ENST00000448087 RASSF7Q02833 373 aa7.73□□□□□ -1.17
GTF3C3-205ENST00000448087 FBXO11Q86XK2 927 aa7.73□□□□□ -1.17
GTF3C3-205ENST00000448087 CARD10Q9BWT7 1032 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms