RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 MICALL2Q8IY33 904 aa31.26■■■□□ 2.59
UFD1-204ENST00000447868 FTSJ3Q8IY81 847 aaKnown RBP31.26■■■□□ 2.59
UFD1-204ENST00000447868 RFX5P48382 616 aaPredicted RBP31.25■■■□□ 2.59
UFD1-204ENST00000447868 APLP1P51693 650 aa31.25■■■□□ 2.59
UFD1-204ENST00000447868 DPF2Q92785 391 aa31.25■■■□□ 2.59
UFD1-204ENST00000447868 FBXW7Q969H0 707 aa31.25■■■□□ 2.59
UFD1-204ENST00000447868 PSME4Q14997 1843 aa31.25■■■□□ 2.59
UFD1-204ENST00000447868 MROH5Q6ZUA9 1318 aa31.24■■■□□ 2.59
UFD1-204ENST00000447868 USP17L3A6NCW0 530 aa31.24■■■□□ 2.59
UFD1-204ENST00000447868 USP17L4A6NCW7 530 aa31.24■■■□□ 2.59
UFD1-204ENST00000447868 H7C1D1 291 aa31.24■■■□□ 2.59
UFD1-204ENST00000447868 RPS12P25398 132 aaKnown RBP31.24■■■□□ 2.59
UFD1-204ENST00000447868 USP17L1Q7RTZ2 530 aa31.24■■■□□ 2.59
UFD1-204ENST00000447868 METTL24Q5JXM2 366 aa31.23■■■□□ 2.59
UFD1-204ENST00000447868 MAP1SQ66K74 1059 aaPredicted RBP31.23■■■□□ 2.59
UFD1-204ENST00000447868 RSBN1LQ6PCB5 846 aaPredicted RBP31.23■■■□□ 2.59
UFD1-204ENST00000447868 DZIP1LQ8IYY4 767 aaKnown RBP31.23■■■□□ 2.59
UFD1-204ENST00000447868 IRS2Q9Y4H2 1338 aa31.23■■■□□ 2.59
UFD1-204ENST00000447868 RLBP1P12271 317 aa31.21■■■□□ 2.59
UFD1-204ENST00000447868 PTPN12Q05209 780 aaKnown RBP31.21■■■□□ 2.59
UFD1-204ENST00000447868 C15orf52Q6ZUT6 534 aaKnown RBP31.21■■■□□ 2.59
UFD1-204ENST00000447868 TRPM4Q8TD43 1214 aa31.21■■■□□ 2.59
UFD1-204ENST00000447868 HTRA3P83110 453 aa31.2■■■□□ 2.59
UFD1-204ENST00000447868 CD209Q9NNX6 404 aa31.2■■■□□ 2.59
UFD1-204ENST00000447868 EYA2O00167 538 aa31.19■■■□□ 2.58
UFD1-204ENST00000447868 UBE4AQ14139 1066 aa31.19■■■□□ 2.58
UFD1-204ENST00000447868 SAMD7Q7Z3H4 446 aa31.19■■■□□ 2.58
UFD1-204ENST00000447868 ZNF804AQ7Z570 1209 aa31.19■■■□□ 2.58
UFD1-204ENST00000447868 ITPRIPQ8IWB1 547 aa31.19■■■□□ 2.58
UFD1-204ENST00000447868 CNTROBQ8N137 903 aa31.19■■■□□ 2.58
UFD1-204ENST00000447868 MXD3Q9BW11 206 aa31.19■■■□□ 2.58
UFD1-204ENST00000447868 SIL1Q9H173 461 aa31.19■■■□□ 2.58
UFD1-204ENST00000447868 RCAN3Q9UKA8 241 aa31.19■■■□□ 2.58
UFD1-204ENST00000447868 GNAI2P04899 355 aa31.18■■■□□ 2.58
UFD1-204ENST00000447868 TBC1D10BQ4KMP7 808 aaPredicted RBP31.18■■■□□ 2.58
UFD1-204ENST00000447868 RBM26Q5T8P6 1007 aaKnown RBP31.18■■■□□ 2.58
UFD1-204ENST00000447868 AGBL3Q8NEM8 1001 aa31.18■■■□□ 2.58
UFD1-204ENST00000447868 HIRAP54198 1017 aaPredicted RBP31.17■■■□□ 2.58
UFD1-204ENST00000447868 STRIP1Q5VSL9 837 aa31.17■■■□□ 2.58
UFD1-204ENST00000447868 YTHDC1Q96MU7 727 aaKnown RBP31.17■■■□□ 2.58
UFD1-204ENST00000447868 ITGBL1O95965 494 aaPredicted RBP31.16■■■□□ 2.58
UFD1-204ENST00000447868 GTF2IP78347 998 aa31.16■■■□□ 2.58
UFD1-204ENST00000447868 DACT2Q5SW24 774 aa31.16■■■□□ 2.58
UFD1-204ENST00000447868 TTLL5Q6EMB2 1281 aa31.16■■■□□ 2.58
UFD1-204ENST00000447868 VGLL2Q8N8G2 317 aa31.16■■■□□ 2.58
UFD1-204ENST00000447868 PA2G4Q9UQ80 394 aaKnown RBP31.16■■■□□ 2.58
UFD1-204ENST00000447868 ZNF646O15015 1829 aaPredicted RBP31.16■■■□□ 2.58
UFD1-204ENST00000447868 SRGAP3O43295 1099 aa31.15■■■□□ 2.58
UFD1-204ENST00000447868 PDE8BO95263 885 aa31.15■■■□□ 2.58
UFD1-204ENST00000447868 EGFRP00533 1210 aa31.15■■■□□ 2.58
UFD1-204ENST00000447868 PANK1Q8TE04 598 aa31.15■■■□□ 2.58
UFD1-204ENST00000447868 GMLQ99445 158 aa31.15■■■□□ 2.58
UFD1-204ENST00000447868 GYG1P46976 350 aa31.14■■■□□ 2.58
UFD1-204ENST00000447868 ATG9AQ7Z3C6 839 aa31.14■■■□□ 2.58
UFD1-204ENST00000447868 PASKQ96RG2 1323 aa31.14■■■□□ 2.58
UFD1-204ENST00000447868 ZNF609O15014 1411 aa31.14■■■□□ 2.58
UFD1-204ENST00000447868 USP17L8P0C7I0 530 aa31.12■■■□□ 2.57
UFD1-204ENST00000447868 IL1R1P14778 569 aa31.12■■■□□ 2.57
UFD1-204ENST00000447868 CIAO1O76071 339 aa31.11■■■□□ 2.57
UFD1-204ENST00000447868 HIBADHP31937 336 aaKnown RBP31.11■■■□□ 2.57
UFD1-204ENST00000447868 ZNF280AP59817 542 aaPredicted RBP31.11■■■□□ 2.57
UFD1-204ENST00000447868 MTX1Q13505 466 aa31.11■■■□□ 2.57
UFD1-204ENST00000447868 KIF4BQ2VIQ3 1234 aa31.11■■■□□ 2.57
UFD1-204ENST00000447868 FAM84BQ96KN1 310 aaPredicted RBP31.11■■■□□ 2.57
UFD1-204ENST00000447868 COPRSQ9NQ92 184 aa31.11■■■□□ 2.57
UFD1-204ENST00000447868 FBXO3Q9UK99 471 aa31.11■■■□□ 2.57
UFD1-204ENST00000447868 CEP350Q5VT06 3117 aa31.1■■■□□ 2.57
UFD1-204ENST00000447868 MYO3BQ8WXR4 1341 aa31.1■■■□□ 2.57
UFD1-204ENST00000447868 PUM3Q15397 648 aaKnown RBP31.1■■■□□ 2.57
UFD1-204ENST00000447868 ZC3H15Q8WU90 426 aaKnown RBP31.1■■■□□ 2.57
UFD1-204ENST00000447868 C1orf115Q9H7X2 142 aa31.1■■■□□ 2.57
UFD1-204ENST00000447868 JAG2Q9Y219 1238 aa31.1■■■□□ 2.57
UFD1-204ENST00000447868 VPS37DQ86XT2 251 aa31.09■■■□□ 2.57
UFD1-204ENST00000447868 PGAP2Q9UHJ9 254 aa31.09■■■□□ 2.57
UFD1-204ENST00000447868 ZBTB7BO15156 539 aaPredicted RBP31.08■■■□□ 2.57
UFD1-204ENST00000447868 MS4A1P11836 297 aa31.08■■■□□ 2.57
UFD1-204ENST00000447868 IL15P40933 162 aaPredicted RBP31.08■■■□□ 2.57
UFD1-204ENST00000447868 FMR1Q06787 632 aaKnown RBP eCLIP31.08■■■□□ 2.57
UFD1-204ENST00000447868 MYOZ2Q9NPC6 264 aa31.08■■■□□ 2.57
UFD1-204ENST00000447868 PNMA6EA0A0J9YXQ4 647 aa31.07■■■□□ 2.56
UFD1-204ENST00000447868 TRAF5O00463 557 aa31.07■■■□□ 2.56
UFD1-204ENST00000447868 IFIT1P09914 478 aaKnown RBP31.07■■■□□ 2.56
UFD1-204ENST00000447868 FGFR2P21802 821 aa31.07■■■□□ 2.56
UFD1-204ENST00000447868 CAVIN4Q5BKX8 364 aa31.07■■■□□ 2.56
UFD1-204ENST00000447868 KIAA0825Q8IV33 1275 aa31.07■■■□□ 2.56
UFD1-204ENST00000447868 GLIS2Q9BZE0 524 aaPredicted RBP31.07■■■□□ 2.56
UFD1-204ENST00000447868 CEP126Q9P2H0 1117 aa31.07■■■□□ 2.56
UFD1-204ENST00000447868 FBXO33Q7Z6M2 555 aa31.06■■■□□ 2.56
UFD1-204ENST00000447868 OGFOD1Q8N543 542 aa31.06■■■□□ 2.56
UFD1-204ENST00000447868 TDRD7Q8NHU6 1098 aaKnown RBP31.06■■■□□ 2.56
UFD1-204ENST00000447868 SLC5A1P13866 664 aa31.05■■■□□ 2.56
UFD1-204ENST00000447868 CERS5Q8N5B7 392 aa31.05■■■□□ 2.56
UFD1-204ENST00000447868 CREBZFQ9NS37 354 aa31.05■■■□□ 2.56
UFD1-204ENST00000447868 IQSEC3Q9UPP2 1182 aaPredicted RBP31.05■■■□□ 2.56
UFD1-204ENST00000447868 ASTN2O75129 1339 aaPredicted RBP31.04■■■□□ 2.56
UFD1-204ENST00000447868 SASH1O94885 1247 aa31.04■■■□□ 2.56
UFD1-204ENST00000447868 BCAMP50895 628 aa31.04■■■□□ 2.56
UFD1-204ENST00000447868 DNAJC5GQ8N7S2 189 aa31.04■■■□□ 2.56
UFD1-204ENST00000447868 LPIN2Q92539 896 aa31.04■■■□□ 2.56
UFD1-204ENST00000447868 TMEM88BA6NKF7 163 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms