RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 LRRC37AA6NMS7 1700 aa14.33□□□□□ -0.12
LINC00408-201ENST00000447784 CXCL9Q07325 125 aa14.33□□□□□ -0.12
LINC00408-201ENST00000447784 PNMA8AQ86V59 439 aaPredicted RBP14.33□□□□□ -0.12
LINC00408-201ENST00000447784 ERC1Q8IUD2 1116 aa14.33□□□□□ -0.12
LINC00408-201ENST00000447784 PUS3Q9BZE2 481 aaKnown RBP14.33□□□□□ -0.12
LINC00408-201ENST00000447784 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
LINC00408-201ENST00000447784 MINPP1Q9UNW1 487 aa14.33□□□□□ -0.12
LINC00408-201ENST00000447784 GJA3Q9Y6H8 435 aa14.33□□□□□ -0.12
LINC00408-201ENST00000447784 DUOX1Q9NRD9 1551 aa14.33□□□□□ -0.12
LINC00408-201ENST00000447784 COL4A1P02462 1669 aa14.33□□□□□ -0.12
LINC00408-201ENST00000447784 EPHX2P34913 555 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 SCNN1DP51172 638 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 CHRNDQ07001 517 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 TNIP1Q15025 636 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 LRRC24Q50LG9 513 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 ERICH6BQ5W0A0 696 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 CIAPIN1Q6FI81 312 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 LDHDQ86WU2 507 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 SIRT2Q8IXJ6 389 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 ZC3H12CQ9C0D7 883 aaKnown RBP14.32□□□□□ -0.12
LINC00408-201ENST00000447784 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
LINC00408-201ENST00000447784 GGA1Q9UJY5 639 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 XDHP47989 1333 aa14.32□□□□□ -0.12
LINC00408-201ENST00000447784 ATP2B4P23634 1241 aa14.31□□□□□ -0.12
LINC00408-201ENST00000447784 LMOD1P29536 600 aaPredicted RBP14.31□□□□□ -0.12
LINC00408-201ENST00000447784 HDAC1Q13547 482 aaPredicted RBP14.31□□□□□ -0.12
LINC00408-201ENST00000447784 IFFO2Q5TF58 517 aa14.31□□□□□ -0.12
LINC00408-201ENST00000447784 NOP58Q9Y2X3 529 aaKnown RBP14.31□□□□□ -0.12
LINC00408-201ENST00000447784 RIPOR2Q9Y4F9 1068 aa14.31□□□□□ -0.12
LINC00408-201ENST00000447784 YDJCA8MPS7 323 aa14.3□□□□□ -0.12
LINC00408-201ENST00000447784 RAB11FIP3O75154 756 aa14.3□□□□□ -0.12
LINC00408-201ENST00000447784 UFL1O94874 794 aa14.3□□□□□ -0.12
LINC00408-201ENST00000447784 POTEIP0CG38 1075 aa14.3□□□□□ -0.12
LINC00408-201ENST00000447784 POTEJP0CG39 1038 aa14.3□□□□□ -0.12
LINC00408-201ENST00000447784 HELBQ8NG08 1087 aaPredicted RBP14.3□□□□□ -0.12
LINC00408-201ENST00000447784 EXOC6BQ9Y2D4 811 aa14.3□□□□□ -0.12
LINC00408-201ENST00000447784 LEMD3Q9Y2U8 911 aa14.3□□□□□ -0.12
LINC00408-201ENST00000447784 APBB1O00213 710 aa14.29□□□□□ -0.12
LINC00408-201ENST00000447784 RIMBP2O15034 1052 aa14.29□□□□□ -0.12
LINC00408-201ENST00000447784 TAF5LO75529 589 aa14.29□□□□□ -0.12
LINC00408-201ENST00000447784 RAD17O75943 681 aa14.29□□□□□ -0.12
LINC00408-201ENST00000447784 PDE8BO95263 885 aa14.29□□□□□ -0.12
LINC00408-201ENST00000447784 ATG9AQ7Z3C6 839 aa14.29□□□□□ -0.12
LINC00408-201ENST00000447784 GPRC5DQ9NZD1 345 aa14.29□□□□□ -0.12
LINC00408-201ENST00000447784 AKAP2Q9Y2D5 859 aa14.29□□□□□ -0.12
LINC00408-201ENST00000447784 ZNF804BA4D1E1 1349 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 G3V3G9 751 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 ECE2O60344 883 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 IFIT1P09914 478 aaKnown RBP14.28□□□□□ -0.12
LINC00408-201ENST00000447784 EPS15P42566 896 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 TFCP2Q12800 502 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 PUM3Q15397 648 aaKnown RBP14.28□□□□□ -0.12
LINC00408-201ENST00000447784 EAPPQ56P03 285 aaPredicted RBP14.28□□□□□ -0.12
LINC00408-201ENST00000447784 DCAF8Q5TAQ9 597 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 USP50Q70EL3 339 aaPredicted RBP14.28□□□□□ -0.12
LINC00408-201ENST00000447784 GCC1Q96CN9 775 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 KIF1BPQ96EK5 621 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 BCL11AQ9H165 835 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 DCTPP1Q9H773 170 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 DBNDD1Q9H9R9 158 aa14.28□□□□□ -0.12
LINC00408-201ENST00000447784 ADARB2Q9NS39 739 aaKnown RBP14.28□□□□□ -0.12
LINC00408-201ENST00000447784 SCN4AP35499 1836 aa14.27□□□□□ -0.12
LINC00408-201ENST00000447784 LTBP1Q14766 1721 aa14.27□□□□□ -0.12
LINC00408-201ENST00000447784 GMPSP49915 693 aaPredicted RBP14.27□□□□□ -0.13
LINC00408-201ENST00000447784 DOK7Q18PE1 504 aa14.27□□□□□ -0.13
LINC00408-201ENST00000447784 DPF2Q92785 391 aa14.27□□□□□ -0.13
LINC00408-201ENST00000447784 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.13
LINC00408-201ENST00000447784 GPR101Q96P66 508 aaPredicted RBP14.27□□□□□ -0.13
LINC00408-201ENST00000447784 TAF1P21675 1872 aa14.27□□□□□ -0.13
LINC00408-201ENST00000447784 MED23Q9ULK4 1368 aa14.26□□□□□ -0.13
LINC00408-201ENST00000447784 SLC5A1P13866 664 aa14.26□□□□□ -0.13
LINC00408-201ENST00000447784 RPS12P25398 132 aaKnown RBP14.26□□□□□ -0.13
LINC00408-201ENST00000447784 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
LINC00408-201ENST00000447784 ATP2B3Q16720 1220 aa14.26□□□□□ -0.13
LINC00408-201ENST00000447784 PODNQ7Z5L7 613 aa14.26□□□□□ -0.13
LINC00408-201ENST00000447784 CLASRPQ8N2M8 674 aaKnown RBP14.26□□□□□ -0.13
LINC00408-201ENST00000447784 DNAJC5GQ8N7S2 189 aa14.26□□□□□ -0.13
LINC00408-201ENST00000447784 RHPN1Q8TCX5 695 aa14.26□□□□□ -0.13
LINC00408-201ENST00000447784 LPIN2Q92539 896 aa14.26□□□□□ -0.13
LINC00408-201ENST00000447784 LRRCC1Q9C099 1032 aa14.26□□□□□ -0.13
LINC00408-201ENST00000447784 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
LINC00408-201ENST00000447784 PASKQ96RG2 1323 aa14.25□□□□□ -0.13
LINC00408-201ENST00000447784 PSMD14O00487 310 aa14.25□□□□□ -0.13
LINC00408-201ENST00000447784 ITGBL1O95965 494 aaPredicted RBP14.25□□□□□ -0.13
LINC00408-201ENST00000447784 VIL1P09327 827 aaKnown RBP14.25□□□□□ -0.13
LINC00408-201ENST00000447784 CAVIN4Q5BKX8 364 aa14.25□□□□□ -0.13
LINC00408-201ENST00000447784 GORABQ5T7V8 394 aa14.25□□□□□ -0.13
LINC00408-201ENST00000447784 VPS37DQ86XT2 251 aa14.25□□□□□ -0.13
LINC00408-201ENST00000447784 NEUROD6Q96NK8 337 aa14.25□□□□□ -0.13
LINC00408-201ENST00000447784 SASH1O94885 1247 aa14.24□□□□□ -0.13
LINC00408-201ENST00000447784 IGHDP01880 384 aa14.24□□□□□ -0.13
LINC00408-201ENST00000447784 ANKRD45Q5TZF3 282 aa14.24□□□□□ -0.13
LINC00408-201ENST00000447784 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
LINC00408-201ENST00000447784 VGLL2Q8N8G2 317 aa14.24□□□□□ -0.13
LINC00408-201ENST00000447784 GPR108Q9NPR9 543 aa14.24□□□□□ -0.13
LINC00408-201ENST00000447784 PPP4R2Q9NY27 417 aa14.24□□□□□ -0.13
LINC00408-201ENST00000447784 CNOT7Q9UIV1 285 aaKnown RBP14.24□□□□□ -0.13
LINC00408-201ENST00000447784 A0A1B0GUL7 405 aa14.23□□□□□ -0.13
LINC00408-201ENST00000447784 WTIPA6NIX2 430 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms