RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 CASC1Q6TDU7 716 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 PLA2G12BQ9BX93 195 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 DCTPP1Q9H773 170 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 ABCC12Q96J65 1359 aa7.11□□□□□ -1.27
PROM1-201ENST00000447510 FKBP4Q02790 459 aaKnown RBP eCLIP7.1□□□□□ -1.27
PROM1-201ENST00000447510 EYA3Q99504 573 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 ISY1Q9ULR0 285 aaKnown RBP7.1□□□□□ -1.27
PROM1-201ENST00000447510 IQSEC3Q9UPP2 1182 aaPredicted RBP7.1□□□□□ -1.27
PROM1-201ENST00000447510 DYNC1I1O14576 645 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 TIMM10P62072 90 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 CHRNDQ07001 517 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 DMTNQ08495 405 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 C3orf67Q6ZVT6 689 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 CCDC94Q9BW85 323 aaPredicted RBP7.1□□□□□ -1.27
PROM1-201ENST00000447510 COPRSQ9NQ92 184 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 C5P01031 1676 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 MROH5Q6ZUA9 1318 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 PTPN12Q05209 780 aaKnown RBP7.1□□□□□ -1.27
PROM1-201ENST00000447510 CSPP1Q1MSJ5 1256 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 PRPF40BQ6NWY9 871 aaKnown RBP7.1□□□□□ -1.27
PROM1-201ENST00000447510 TMC4Q7Z404 712 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 JDP2Q8WYK2 163 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 FHDC1Q9C0D6 1143 aaPredicted RBP7.1□□□□□ -1.27
PROM1-201ENST00000447510 VIRMAQ69YN4 1812 aaKnown RBP7.1□□□□□ -1.27
PROM1-201ENST00000447510 SIPA1L3O60292 1781 aaPredicted RBP7.1□□□□□ -1.27
PROM1-201ENST00000447510 UTYO14607 1347 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 CSF1RP07333 972 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 RABL6Q3YEC7 729 aaPredicted RBP7.1□□□□□ -1.27
PROM1-201ENST00000447510 TRERF1Q96PN7 1200 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 CRAMP1Q96RY5 1269 aa7.1□□□□□ -1.27
PROM1-201ENST00000447510 SBF2Q86WG5 1849 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 SRGNP10124 158 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 TGFB2P61812 414 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 PUM3Q15397 648 aaKnown RBP7.09□□□□□ -1.27
PROM1-201ENST00000447510 FOXD4L6Q3SYB3 417 aaPredicted RBP7.09□□□□□ -1.27
PROM1-201ENST00000447510 CCDC93Q567U6 631 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 SOGA3Q5TF21 947 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 SASS6Q6UVJ0 657 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 FOXD4L3Q6VB84 417 aaPredicted RBP7.09□□□□□ -1.27
PROM1-201ENST00000447510 LARGE2Q8N3Y3 721 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 BSDC1Q9NW68 430 aaPredicted RBP7.09□□□□□ -1.27
PROM1-201ENST00000447510 ABCF2Q9UG63 623 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 CD2APQ9Y5K6 639 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 A0A1B0GUL7 405 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 CASP7P55210 303 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 WASHC4Q2M389 1173 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 SUPT20HQ8NEM7 779 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 KAZALD1Q96I82 304 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 BOLA2Q9H3K6 86 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 SNRKQ9NRH2 765 aa7.09□□□□□ -1.27
PROM1-201ENST00000447510 MYH14Q7Z406 1995 aaKnown RBP7.09□□□□□ -1.28
PROM1-201ENST00000447510 PPIP5K2O43314 1243 aa7.09□□□□□ -1.28
PROM1-201ENST00000447510 MAP4K4O95819 1239 aaPredicted RBP7.09□□□□□ -1.28
PROM1-201ENST00000447510 MTX1Q13505 466 aa7.09□□□□□ -1.28
PROM1-201ENST00000447510 CC2D2BQ6DHV5 1058 aa7.09□□□□□ -1.28
PROM1-201ENST00000447510 STYK1Q6J9G0 422 aa7.09□□□□□ -1.28
PROM1-201ENST00000447510 ZNF804AQ7Z570 1209 aa7.09□□□□□ -1.28
PROM1-201ENST00000447510 SIRT2Q8IXJ6 389 aa7.09□□□□□ -1.28
PROM1-201ENST00000447510 XDHP47989 1333 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 MX1P20591 662 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 ATP2B4P23634 1241 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 FBXO3Q9UK99 471 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 MINPP1Q9UNW1 487 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 PDE8BO95263 885 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 KIAA2012Q0VF49 1180 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 LRRFIP1Q32MZ4 808 aaKnown RBP7.08□□□□□ -1.28
PROM1-201ENST00000447510 LPIN2Q92539 896 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 NOL10Q9BSC4 688 aaKnown RBP7.08□□□□□ -1.28
PROM1-201ENST00000447510 ZNF804BA4D1E1 1349 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 SNAP23O00161 211 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 CIAO1O76071 339 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 HIBADHP31937 336 aaKnown RBP7.08□□□□□ -1.28
PROM1-201ENST00000447510 POLA2Q14181 598 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 TNNI3KQ59H18 835 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 TSHZ3Q63HK5 1081 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 C16orf71Q8IYS4 520 aaPredicted RBP7.08□□□□□ -1.28
PROM1-201ENST00000447510 RTKN2Q8IZC4 609 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 ZNF830Q96NB3 372 aaPredicted RBP7.08□□□□□ -1.28
PROM1-201ENST00000447510 FSD1Q9BTV5 496 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 RAI14Q9P0K7 980 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 LRP2BPQ9P2M1 347 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 JAG2Q9Y219 1238 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 FPGT-TNNI3KV9GXZ4 949 aa7.08□□□□□ -1.28
PROM1-201ENST00000447510 IBTKQ9P2D0 1353 aaPredicted RBP7.08□□□□□ -1.28
PROM1-201ENST00000447510 TJP1Q07157 1748 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 LAMB4A4D0S4 1761 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 CERS3Q8IU89 383 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 SP8Q8IXZ3 490 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 SMC5Q8IY18 1101 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 XAGE2Q96GT9 111 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 DBNDD2Q9BQY9 259 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 ECHDC1Q9NTX5 307 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 RBM27Q9P2N5 1060 aaKnown RBP7.07□□□□□ -1.28
PROM1-201ENST00000447510 LEMD3Q9Y2U8 911 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 CACNA1FO60840 1977 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 UBR2Q8IWV8 1755 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 IDH1O75874 414 aaKnown RBP7.07□□□□□ -1.28
PROM1-201ENST00000447510 UQCRFS1P1P0C7P4 283 aa7.07□□□□□ -1.28
PROM1-201ENST00000447510 ZSCAN20P17040 1043 aaPredicted RBP7.07□□□□□ -1.28
PROM1-201ENST00000447510 RBM5P52756 815 aaKnown RBP eCLIP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms