RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 ZNF280AP59817 542 aaPredicted RBP23.18■■□□□ 1.3
COL9A1-205ENST00000447041 BEND3Q5T5X7 828 aa23.18■■□□□ 1.3
COL9A1-205ENST00000447041 USP17L1Q7RTZ2 530 aa23.18■■□□□ 1.3
COL9A1-205ENST00000447041 TXNRD3Q86VQ6 643 aa23.18■■□□□ 1.3
COL9A1-205ENST00000447041 HHIPL1Q96JK4 782 aa23.18■■□□□ 1.3
COL9A1-205ENST00000447041 GMLQ99445 158 aa23.18■■□□□ 1.3
COL9A1-205ENST00000447041 KLRK1P26718 216 aa23.17■■□□□ 1.3
COL9A1-205ENST00000447041 MPHOSPH8Q99549 860 aa23.17■■□□□ 1.3
COL9A1-205ENST00000447041 ZNF521Q96K83 1311 aa23.16■■□□□ 1.3
COL9A1-205ENST00000447041 MXD3Q9BW11 206 aa23.16■■□□□ 1.3
COL9A1-205ENST00000447041 LEMD3Q9Y2U8 911 aa23.16■■□□□ 1.3
COL9A1-205ENST00000447041 ZNF804BA4D1E1 1349 aa23.15■■□□□ 1.3
COL9A1-205ENST00000447041 USP17L8P0C7I0 530 aa23.15■■□□□ 1.3
COL9A1-205ENST00000447041 MAP2K2P36507 400 aa23.15■■□□□ 1.3
COL9A1-205ENST00000447041 HUNKP57058 714 aa23.15■■□□□ 1.3
COL9A1-205ENST00000447041 FOXO4P98177 505 aa23.15■■□□□ 1.3
COL9A1-205ENST00000447041 MYOZ2Q9NPC6 264 aa23.15■■□□□ 1.3
COL9A1-205ENST00000447041 ANKRD18BA2A2Z9 1011 aa23.14■■□□□ 1.29
COL9A1-205ENST00000447041 SCARF1Q14162 830 aa23.14■■□□□ 1.29
COL9A1-205ENST00000447041 DACT2Q5SW24 774 aa23.14■■□□□ 1.29
COL9A1-205ENST00000447041 ANGEL2Q5VTE6 544 aaKnown RBP23.14■■□□□ 1.29
COL9A1-205ENST00000447041 SULF1Q8IWU6 871 aa23.14■■□□□ 1.29
COL9A1-205ENST00000447041 FBXW7Q969H0 707 aa23.14■■□□□ 1.29
COL9A1-205ENST00000447041 ANKRD2Q9GZV1 360 aa23.14■■□□□ 1.29
COL9A1-205ENST00000447041 COA1Q9GZY4 146 aa23.14■■□□□ 1.29
COL9A1-205ENST00000447041 GBA2Q9HCG7 927 aaPredicted RBP23.14■■□□□ 1.29
COL9A1-205ENST00000447041 CHRNDQ07001 517 aa23.13■■□□□ 1.29
COL9A1-205ENST00000447041 BEGAINQ9BUH8 593 aa23.13■■□□□ 1.29
COL9A1-205ENST00000447041 CHMP3Q9Y3E7 222 aa23.13■■□□□ 1.29
COL9A1-205ENST00000447041 EPHA10Q5JZY3 1008 aa23.12■■□□□ 1.29
COL9A1-205ENST00000447041 TSKSQ9UJT2 592 aa23.12■■□□□ 1.29
COL9A1-205ENST00000447041 SNAP23O00161 211 aa23.11■■□□□ 1.29
COL9A1-205ENST00000447041 IFIT5Q13325 482 aaKnown RBP23.11■■□□□ 1.29
COL9A1-205ENST00000447041 CDCA5Q96FF9 252 aa23.11■■□□□ 1.29
COL9A1-205ENST00000447041 ZIC5Q96T25 663 aa23.11■■□□□ 1.29
COL9A1-205ENST00000447041 GRM8O00222 908 aa23.1■■□□□ 1.29
COL9A1-205ENST00000447041 KCNJ4P48050 445 aa23.1■■□□□ 1.29
COL9A1-205ENST00000447041 STRIP1Q5VSL9 837 aa23.1■■□□□ 1.29
COL9A1-205ENST00000447041 SLC4A10Q6U841 1118 aa23.1■■□□□ 1.29
COL9A1-205ENST00000447041 LMBR1LQ6UX01 489 aa23.1■■□□□ 1.29
COL9A1-205ENST00000447041 C2orf69Q8N8R5 385 aa23.1■■□□□ 1.29
COL9A1-205ENST00000447041 SCAF8Q9UPN6 1271 aaKnown RBP23.1■■□□□ 1.29
COL9A1-205ENST00000447041 TAF5LO75529 589 aa23.09■■□□□ 1.29
COL9A1-205ENST00000447041 BRPF1P55201 1214 aaPredicted RBP23.09■■□□□ 1.29
COL9A1-205ENST00000447041 RGMBQ6NW40 437 aa23.09■■□□□ 1.29
COL9A1-205ENST00000447041 HELBQ8NG08 1087 aaPredicted RBP23.09■■□□□ 1.29
COL9A1-205ENST00000447041 MYO3BQ8WXR4 1341 aa23.08■■□□□ 1.29
COL9A1-205ENST00000447041 IRS2Q9Y4H2 1338 aa23.08■■□□□ 1.29
COL9A1-205ENST00000447041 NBPF9Q3BBW0 867 aa23.08■■□□□ 1.29
COL9A1-205ENST00000447041 ZNF594Q96JF6 807 aaPredicted RBP23.08■■□□□ 1.29
COL9A1-205ENST00000447041 PITPNM2Q9BZ72 1349 aa23.08■■□□□ 1.28
COL9A1-205ENST00000447041 FAM155AB1AL88 458 aaPredicted RBP23.07■■□□□ 1.28
COL9A1-205ENST00000447041 ALDH1L1O75891 902 aa23.07■■□□□ 1.28
COL9A1-205ENST00000447041 NOGQ13253 232 aa23.07■■□□□ 1.28
COL9A1-205ENST00000447041 SRCIN1Q9C0H9 1055 aa23.07■■□□□ 1.28
COL9A1-205ENST00000447041 C9orf78Q9NZ63 289 aaPredicted RBP23.07■■□□□ 1.28
COL9A1-205ENST00000447041 PAPPA2Q9BXP8 1791 aa23.06■■□□□ 1.28
COL9A1-205ENST00000447041 GTF2IP78347 998 aa23.06■■□□□ 1.28
COL9A1-205ENST00000447041 TTLL5Q6EMB2 1281 aa23.06■■□□□ 1.28
COL9A1-205ENST00000447041 CD209Q9NNX6 404 aa23.06■■□□□ 1.28
COL9A1-205ENST00000447041 SASH1O94885 1247 aa23.05■■□□□ 1.28
COL9A1-205ENST00000447041 CCDC57Q2TAC2 916 aa23.05■■□□□ 1.28
COL9A1-205ENST00000447041 OGFOD1Q8N543 542 aa23.05■■□□□ 1.28
COL9A1-205ENST00000447041 SUCLG2Q96I99 432 aa23.05■■□□□ 1.28
COL9A1-205ENST00000447041 WNT10BO00744 389 aa23.04■■□□□ 1.28
COL9A1-205ENST00000447041 ZNF157P51786 506 aaPredicted RBP23.04■■□□□ 1.28
COL9A1-205ENST00000447041 TAF7LQ5H9L4 462 aa23.04■■□□□ 1.28
COL9A1-205ENST00000447041 KIAA0825Q8IV33 1275 aa23.04■■□□□ 1.28
COL9A1-205ENST00000447041 MRPL50Q8N5N7 158 aaKnown RBP23.04■■□□□ 1.28
COL9A1-205ENST00000447041 CA12O43570 354 aa23.03■■□□□ 1.28
COL9A1-205ENST00000447041 LDHAL6AQ6ZMR3 332 aa23.03■■□□□ 1.28
COL9A1-205ENST00000447041 C15orf52Q6ZUT6 534 aaKnown RBP23.03■■□□□ 1.28
COL9A1-205ENST00000447041 KAZALD1Q96I82 304 aa23.03■■□□□ 1.28
COL9A1-205ENST00000447041 E9PSI1 815 aa23.02■■□□□ 1.28
COL9A1-205ENST00000447041 SLC10A3P09131 477 aa23.02■■□□□ 1.28
COL9A1-205ENST00000447041 NBPF7P0C2Y1 421 aaPredicted RBP23.02■■□□□ 1.28
COL9A1-205ENST00000447041 PRAMEF18Q5VWM3 479 aa23.02■■□□□ 1.28
COL9A1-205ENST00000447041 CNNM1Q9NRU3 951 aa23.02■■□□□ 1.28
COL9A1-205ENST00000447041 PLIN1O60240 522 aa23.01■■□□□ 1.27
COL9A1-205ENST00000447041 MOB2Q70IA6 237 aa23.01■■□□□ 1.27
COL9A1-205ENST00000447041 CERS5Q8N5B7 392 aa23.01■■□□□ 1.27
COL9A1-205ENST00000447041 CCDC102AQ96A19 550 aa23.01■■□□□ 1.27
COL9A1-205ENST00000447041 KIF23Q02241 960 aaPredicted RBP23■■□□□ 1.27
COL9A1-205ENST00000447041 ZNF804AQ7Z570 1209 aa23■■□□□ 1.27
COL9A1-205ENST00000447041 HDAC9Q9UKV0 1011 aa23■■□□□ 1.27
COL9A1-205ENST00000447041 UTYO14607 1347 aa23■■□□□ 1.27
COL9A1-205ENST00000447041 IL1R1P14778 569 aa22.99■■□□□ 1.27
COL9A1-205ENST00000447041 SLFN5Q08AF3 891 aa22.99■■□□□ 1.27
COL9A1-205ENST00000447041 RASAL3Q86YV0 1011 aa22.99■■□□□ 1.27
COL9A1-205ENST00000447041 SSH1Q8WYL5 1049 aa22.99■■□□□ 1.27
COL9A1-205ENST00000447041 ABHD8Q96I13 439 aa22.99■■□□□ 1.27
COL9A1-205ENST00000447041 ECM29Q5VYK3 1845 aa22.98■■□□□ 1.27
COL9A1-205ENST00000447041 MMP14P50281 582 aa22.98■■□□□ 1.27
COL9A1-205ENST00000447041 FKBP1BP68106 108 aa22.98■■□□□ 1.27
COL9A1-205ENST00000447041 ZBED3Q96IU2 234 aaPredicted RBP22.98■■□□□ 1.27
COL9A1-205ENST00000447041 PUS3Q9BZE2 481 aaKnown RBP22.98■■□□□ 1.27
COL9A1-205ENST00000447041 BICC1Q9H694 974 aaKnown RBP22.98■■□□□ 1.27
COL9A1-205ENST00000447041 JAG2Q9Y219 1238 aa22.98■■□□□ 1.27
COL9A1-205ENST00000447041 PTPRCP08575 1304 aa22.98■■□□□ 1.27
COL9A1-205ENST00000447041 CASP8AP2Q9UKL3 1982 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms