RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 HSP90B1P14625 803 aaKnown RBP16.29■□□□□ 0.2
RBM39-216ENST00000444878 SYT1P21579 422 aa16.29■□□□□ 0.2
RBM39-216ENST00000444878 GJB2P29033 226 aa16.29■□□□□ 0.2
RBM39-216ENST00000444878 ZAP70P43403 619 aa16.29■□□□□ 0.2
RBM39-216ENST00000444878 NECAB1Q8N987 351 aa16.29■□□□□ 0.2
RBM39-216ENST00000444878 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
RBM39-216ENST00000444878 HSPD1P10809 573 aaKnown RBP16.28■□□□□ 0.2
RBM39-216ENST00000444878 FNBP4Q8N3X1 1017 aaPredicted RBP16.28■□□□□ 0.2
RBM39-216ENST00000444878 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
RBM39-216ENST00000444878 MYO5AQ9Y4I1 1855 aaKnown RBP16.28■□□□□ 0.2
RBM39-216ENST00000444878 BCORQ6W2J9 1755 aa16.28■□□□□ 0.2
RBM39-216ENST00000444878 MROH5Q6ZUA9 1318 aa16.28■□□□□ 0.2
RBM39-216ENST00000444878 TOB2Q14106 344 aaPredicted RBP16.28■□□□□ 0.2
RBM39-216ENST00000444878 WASHC4Q2M389 1173 aa16.28■□□□□ 0.2
RBM39-216ENST00000444878 MPHOSPH8Q99549 860 aa16.28■□□□□ 0.2
RBM39-216ENST00000444878 LAMB2P55268 1798 aa16.27■□□□□ 0.2
RBM39-216ENST00000444878 M0R2C6 588 aa16.27■□□□□ 0.2
RBM39-216ENST00000444878 ZSCAN22P10073 491 aaPredicted RBP16.27■□□□□ 0.2
RBM39-216ENST00000444878 MRE11P49959 708 aa16.27■□□□□ 0.2
RBM39-216ENST00000444878 ST3GAL1Q11201 340 aa16.27■□□□□ 0.2
RBM39-216ENST00000444878 FOXD4L6Q3SYB3 417 aaPredicted RBP16.27■□□□□ 0.2
RBM39-216ENST00000444878 PI16Q6UXB8 463 aa16.27■□□□□ 0.2
RBM39-216ENST00000444878 FOXD4L3Q6VB84 417 aaPredicted RBP16.27■□□□□ 0.2
RBM39-216ENST00000444878 OSBP2Q969R2 916 aa16.27■□□□□ 0.2
RBM39-216ENST00000444878 ZNF512BQ96KM6 892 aaPredicted RBP16.27■□□□□ 0.2
RBM39-216ENST00000444878 LRP5O75197 1615 aa16.27■□□□□ 0.2
RBM39-216ENST00000444878 IGSF3O75054 1194 aa16.27■□□□□ 0.19
RBM39-216ENST00000444878 XRCC6P12956 609 aaKnown RBP eCLIP16.27■□□□□ 0.193e-9■■□□□ 12.4
RBM39-216ENST00000444878 MCAMP43121 646 aa16.27■□□□□ 0.19
RBM39-216ENST00000444878 PUM3Q15397 648 aaKnown RBP16.27■□□□□ 0.19
RBM39-216ENST00000444878 CCDC152Q4G0S7 254 aa16.27■□□□□ 0.19
RBM39-216ENST00000444878 CAVIN1Q6NZI2 390 aaKnown RBP16.27■□□□□ 0.19
RBM39-216ENST00000444878 LINC00116Q8NCU8 138 aa16.27■□□□□ 0.19
RBM39-216ENST00000444878 USP21Q9UK80 565 aa16.27■□□□□ 0.19
RBM39-216ENST00000444878 NTSR2O95665 410 aa16.26■□□□□ 0.19
RBM39-216ENST00000444878 HMGB1P09429 215 aaKnown RBP16.26■□□□□ 0.19
RBM39-216ENST00000444878 HELBQ8NG08 1087 aaPredicted RBP16.26■□□□□ 0.19
RBM39-216ENST00000444878 LPIN2Q92539 896 aa16.26■□□□□ 0.19
RBM39-216ENST00000444878 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.26■□□□□ 0.192e-8■□□□□ 11.3
RBM39-216ENST00000444878 CLEC4GQ6UXB4 293 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 Q6ZUG5 572 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 GPT2Q8TD30 523 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 APPBP2Q92624 585 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 GRPEL1Q9HAV7 217 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 ARAP2Q8WZ64 1704 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 FGD1P98174 961 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 TTF1Q15361 905 aaPredicted RBP16.25■□□□□ 0.19
RBM39-216ENST00000444878 CCDC102BQ68D86 513 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 STOX1Q6ZVD7 989 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 SEC31BQ9NQW1 1179 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 ATP6V1DQ9Y5K8 247 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 BTAF1O14981 1849 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 SPATA31A6Q5VVP1 1343 aa16.25■□□□□ 0.19
RBM39-216ENST00000444878 MBD3O95983 291 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 F13A1P00488 732 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 UQCRFS1P1P0C7P4 283 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 KCNQ4P56696 695 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 ZSCAN25Q6NSZ9 544 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 DTNBO60941 627 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 SLC5A1P13866 664 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 FGFR2P21802 821 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 IGHMBP2P38935 993 aaKnown RBP16.24■□□□□ 0.19
RBM39-216ENST00000444878 PHKA1P46020 1223 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 STK3Q13188 491 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 DHX32Q7L7V1 743 aaKnown RBP16.24■□□□□ 0.19
RBM39-216ENST00000444878 GAS2L3Q86XJ1 694 aa16.24■□□□□ 0.19
RBM39-216ENST00000444878 ARID4AP29374 1257 aaPredicted RBP16.23■□□□□ 0.19
RBM39-216ENST00000444878 CTNNA3Q9UI47 895 aa16.23■□□□□ 0.19
RBM39-216ENST00000444878 CNTNAP4Q9C0A0 1308 aa16.23■□□□□ 0.19
RBM39-216ENST00000444878 E7EWF7 191 aa16.22■□□□□ 0.19
RBM39-216ENST00000444878 PDCP20941 246 aa16.22■□□□□ 0.19
RBM39-216ENST00000444878 LARP1BQ659C4 914 aaKnown RBP16.22■□□□□ 0.19
RBM39-216ENST00000444878 PTF1AQ7RTS3 328 aa16.22■□□□□ 0.19
RBM39-216ENST00000444878 PUS7LQ9H0K6 701 aaKnown RBP16.22■□□□□ 0.19
RBM39-216ENST00000444878 MTMR6Q9Y217 621 aa16.22■□□□□ 0.19
RBM39-216ENST00000444878 RTL9Q8NET4 1388 aa16.22■□□□□ 0.19
RBM39-216ENST00000444878 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
RBM39-216ENST00000444878 ZSCAN23Q3MJ62 389 aa16.22■□□□□ 0.19
RBM39-216ENST00000444878 LRRC2Q9BYS8 371 aa16.22■□□□□ 0.19
RBM39-216ENST00000444878 GDPD2Q9HCC8 539 aa16.22■□□□□ 0.19
RBM39-216ENST00000444878 CASZ1Q86V15 1759 aa16.21■□□□□ 0.19
RBM39-216ENST00000444878 A0A0G2JLW4 131 aa16.21■□□□□ 0.19
RBM39-216ENST00000444878 GPAA1O43292 621 aa16.21■□□□□ 0.19
RBM39-216ENST00000444878 IDH1O75874 414 aaKnown RBP16.21■□□□□ 0.19
RBM39-216ENST00000444878 ADD2P35612 726 aa16.21■□□□□ 0.19
RBM39-216ENST00000444878 SLC9C2Q5TAH2 1124 aa16.21■□□□□ 0.19
RBM39-216ENST00000444878 TTLL5Q6EMB2 1281 aa16.21■□□□□ 0.19
RBM39-216ENST00000444878 USP48Q86UV5 1035 aa16.21■□□□□ 0.19
RBM39-216ENST00000444878 BRF1Q92994 677 aa16.21■□□□□ 0.19
RBM39-216ENST00000444878 GTF3C6Q969F1 213 aa16.21■□□□□ 0.19
RBM39-216ENST00000444878 THSD7AQ9UPZ6 1657 aa16.21■□□□□ 0.19
RBM39-216ENST00000444878 ZNF445P59923 1031 aa16.21■□□□□ 0.18
RBM39-216ENST00000444878 IMMTQ16891 758 aaKnown RBP16.21■□□□□ 0.18
RBM39-216ENST00000444878 NSFL1CQ9UNZ2 370 aaKnown RBP16.21■□□□□ 0.18
RBM39-216ENST00000444878 NHSQ6T4R5 1651 aa16.2■□□□□ 0.18
RBM39-216ENST00000444878 CDC5LQ99459 802 aaKnown RBP16.2■□□□□ 0.18
RBM39-216ENST00000444878 PANK2Q9BZ23 570 aa16.2■□□□□ 0.18
RBM39-216ENST00000444878 PIH1D3Q9NQM4 214 aaKnown RBP16.2■□□□□ 0.18
RBM39-216ENST00000444878 RBM27Q9P2N5 1060 aaKnown RBP16.2■□□□□ 0.18
RBM39-216ENST00000444878 TAF1P21675 1872 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms