RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 FAM161AQ3B820 660 aa17.73■□□□□ 0.43
TREX1-202ENST00000444177 ALDH1L2Q3SY69 923 aa17.73■□□□□ 0.43
TREX1-202ENST00000444177 USP17L1Q7RTZ2 530 aa17.73■□□□□ 0.43
TREX1-202ENST00000444177 DCPSQ96C86 337 aaKnown RBP17.73■□□□□ 0.43
TREX1-202ENST00000444177 GMLQ99445 158 aa17.73■□□□□ 0.43
TREX1-202ENST00000444177 LEMD3Q9Y2U8 911 aa17.73■□□□□ 0.43
TREX1-202ENST00000444177 POLR2AP24928 1970 aaKnown RBP17.72■□□□□ 0.43
TREX1-202ENST00000444177 MED23Q9ULK4 1368 aa17.72■□□□□ 0.43
TREX1-202ENST00000444177 HHIPL1Q96JK4 782 aa17.72■□□□□ 0.43
TREX1-202ENST00000444177 MPHOSPH8Q99549 860 aa17.72■□□□□ 0.43
TREX1-202ENST00000444177 SRCIN1Q9C0H9 1055 aa17.72■□□□□ 0.43
TREX1-202ENST00000444177 ANKRD2Q9GZV1 360 aa17.72■□□□□ 0.43
TREX1-202ENST00000444177 GRM8O00222 908 aa17.71■□□□□ 0.43
TREX1-202ENST00000444177 AOC2O75106 756 aa17.71■□□□□ 0.43
TREX1-202ENST00000444177 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
TREX1-202ENST00000444177 USP17L8P0C7I0 530 aa17.71■□□□□ 0.43
TREX1-202ENST00000444177 MAP2K2P36507 400 aa17.71■□□□□ 0.43
TREX1-202ENST00000444177 LBX1P52954 281 aa17.71■□□□□ 0.43
TREX1-202ENST00000444177 FOXO4P98177 505 aa17.71■□□□□ 0.43
TREX1-202ENST00000444177 TXNRD3Q86VQ6 643 aa17.71■□□□□ 0.43
TREX1-202ENST00000444177 ASTN2O75129 1339 aaPredicted RBP17.71■□□□□ 0.42
TREX1-202ENST00000444177 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
TREX1-202ENST00000444177 ADM5C9JUS6 153 aa17.7■□□□□ 0.42
TREX1-202ENST00000444177 ALDH1L1O75891 902 aa17.7■□□□□ 0.42
TREX1-202ENST00000444177 SCARF1Q14162 830 aa17.7■□□□□ 0.42
TREX1-202ENST00000444177 COA1Q9GZY4 146 aa17.7■□□□□ 0.42
TREX1-202ENST00000444177 C9orf78Q9NZ63 289 aaPredicted RBP17.7■□□□□ 0.42
TREX1-202ENST00000444177 ZNF804BA4D1E1 1349 aa17.7■□□□□ 0.42
TREX1-202ENST00000444177 CAPN15O75808 1086 aa17.69■□□□□ 0.42
TREX1-202ENST00000444177 HSPA8P11142 646 aaKnown RBP17.69■□□□□ 0.42
TREX1-202ENST00000444177 IFIT5Q13325 482 aaKnown RBP17.69■□□□□ 0.42
TREX1-202ENST00000444177 DACT2Q5SW24 774 aa17.69■□□□□ 0.42
TREX1-202ENST00000444177 SULF1Q8IWU6 871 aa17.69■□□□□ 0.42
TREX1-202ENST00000444177 GGA3Q9NZ52 723 aa17.69■□□□□ 0.42
TREX1-202ENST00000444177 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
TREX1-202ENST00000444177 ZNF609O15014 1411 aa17.69■□□□□ 0.42
TREX1-202ENST00000444177 KLRK1P26718 216 aa17.68■□□□□ 0.42
TREX1-202ENST00000444177 HUNKP57058 714 aa17.68■□□□□ 0.42
TREX1-202ENST00000444177 CHRNDQ07001 517 aa17.68■□□□□ 0.42
TREX1-202ENST00000444177 EPHA10Q5JZY3 1008 aa17.68■□□□□ 0.42
TREX1-202ENST00000444177 STRIP1Q5VSL9 837 aa17.68■□□□□ 0.42
TREX1-202ENST00000444177 LMBR1LQ6UX01 489 aa17.68■□□□□ 0.42
TREX1-202ENST00000444177 BEGAINQ9BUH8 593 aa17.68■□□□□ 0.42
TREX1-202ENST00000444177 MXD3Q9BW11 206 aa17.68■□□□□ 0.42
TREX1-202ENST00000444177 GBA2Q9HCG7 927 aaPredicted RBP17.68■□□□□ 0.42
TREX1-202ENST00000444177 MYOZ2Q9NPC6 264 aa17.68■□□□□ 0.42
TREX1-202ENST00000444177 ANGEL2Q5VTE6 544 aaKnown RBP17.67■□□□□ 0.42
TREX1-202ENST00000444177 C2orf69Q8N8R5 385 aa17.67■□□□□ 0.42
TREX1-202ENST00000444177 KCNJ4P48050 445 aa17.66■□□□□ 0.42
TREX1-202ENST00000444177 HELBQ8NG08 1087 aaPredicted RBP17.66■□□□□ 0.42
TREX1-202ENST00000444177 FBXW7Q969H0 707 aa17.66■□□□□ 0.42
TREX1-202ENST00000444177 SNAP23O00161 211 aa17.65■□□□□ 0.42
TREX1-202ENST00000444177 TAF5LO75529 589 aa17.65■□□□□ 0.42
TREX1-202ENST00000444177 CCDC57Q2TAC2 916 aa17.65■□□□□ 0.42
TREX1-202ENST00000444177 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
TREX1-202ENST00000444177 OGFOD1Q8N543 542 aa17.65■□□□□ 0.42
TREX1-202ENST00000444177 PSME4Q14997 1843 aa17.64■□□□□ 0.41
TREX1-202ENST00000444177 RARSP54136 660 aaKnown RBP17.64■□□□□ 0.41
TREX1-202ENST00000444177 RGMBQ6NW40 437 aa17.64■□□□□ 0.41
TREX1-202ENST00000444177 CDCA5Q96FF9 252 aa17.64■□□□□ 0.41
TREX1-202ENST00000444177 SUCLG2Q96I99 432 aa17.64■□□□□ 0.41
TREX1-202ENST00000444177 ZNF594Q96JF6 807 aaPredicted RBP17.64■□□□□ 0.41
TREX1-202ENST00000444177 NOB1Q9ULX3 412 aaKnown RBP17.64■□□□□ 0.41
TREX1-202ENST00000444177 MYO3BQ8WXR4 1341 aa17.64■□□□□ 0.41
TREX1-202ENST00000444177 KIF16BQ96L93 1317 aa17.64■□□□□ 0.41
TREX1-202ENST00000444177 NBPF7P0C2Y1 421 aaPredicted RBP17.63■□□□□ 0.41
TREX1-202ENST00000444177 GTF2IP78347 998 aa17.63■□□□□ 0.41
TREX1-202ENST00000444177 NOGQ13253 232 aa17.63■□□□□ 0.41
TREX1-202ENST00000444177 NBPF9Q3BBW0 867 aa17.63■□□□□ 0.41
TREX1-202ENST00000444177 LDHAL6AQ6ZMR3 332 aa17.63■□□□□ 0.41
TREX1-202ENST00000444177 C15orf52Q6ZUT6 534 aaKnown RBP17.63■□□□□ 0.41
TREX1-202ENST00000444177 ZIC5Q96T25 663 aa17.63■□□□□ 0.41
TREX1-202ENST00000444177 CD209Q9NNX6 404 aa17.63■□□□□ 0.41
TREX1-202ENST00000444177 ZBED9Q6R2W3 1325 aa17.63■□□□□ 0.41
TREX1-202ENST00000444177 IRS2Q9Y4H2 1338 aa17.63■□□□□ 0.41
TREX1-202ENST00000444177 THSD7BQ9C0I4 1608 aa17.62■□□□□ 0.41
TREX1-202ENST00000444177 MMP14P50281 582 aa17.62■□□□□ 0.41
TREX1-202ENST00000444177 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
TREX1-202ENST00000444177 TAF7LQ5H9L4 462 aa17.62■□□□□ 0.41
TREX1-202ENST00000444177 CCDC102AQ96A19 550 aa17.62■□□□□ 0.41
TREX1-202ENST00000444177 KAZALD1Q96I82 304 aa17.62■□□□□ 0.41
TREX1-202ENST00000444177 API5Q9BZZ5 524 aaKnown RBP17.62■□□□□ 0.41
TREX1-202ENST00000444177 UTYO14607 1347 aa17.62■□□□□ 0.41
TREX1-202ENST00000444177 PITPNM2Q9BZ72 1349 aa17.62■□□□□ 0.41
TREX1-202ENST00000444177 A0A1B0GUL6 1792 aa17.61■□□□□ 0.41
TREX1-202ENST00000444177 FAM155AB1AL88 458 aaPredicted RBP17.61■□□□□ 0.41
TREX1-202ENST00000444177 WNT10BO00744 389 aa17.61■□□□□ 0.41
TREX1-202ENST00000444177 CA12O43570 354 aa17.61■□□□□ 0.41
TREX1-202ENST00000444177 PLIN1O60240 522 aa17.61■□□□□ 0.41
TREX1-202ENST00000444177 ZNF157P51786 506 aaPredicted RBP17.61■□□□□ 0.41
TREX1-202ENST00000444177 TSKSQ9UJT2 592 aa17.61■□□□□ 0.41
TREX1-202ENST00000444177 SCAF8Q9UPN6 1271 aaKnown RBP17.61■□□□□ 0.41
TREX1-202ENST00000444177 KIAA0825Q8IV33 1275 aa17.6■□□□□ 0.41
TREX1-202ENST00000444177 BICC1Q9H694 974 aaKnown RBP17.6■□□□□ 0.41
TREX1-202ENST00000444177 CNNM1Q9NRU3 951 aa17.6■□□□□ 0.41
TREX1-202ENST00000444177 PRAMEF18Q5VWM3 479 aa17.59■□□□□ 0.41
TREX1-202ENST00000444177 HDAC9Q9UKV0 1011 aa17.59■□□□□ 0.41
TREX1-202ENST00000444177 IL1R1P14778 569 aa17.58■□□□□ 0.4
TREX1-202ENST00000444177 FKBP1BP68106 108 aa17.58■□□□□ 0.4
TREX1-202ENST00000444177 KIF23Q02241 960 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms