RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ADM5C9JUS6 153 aa14.97□□□□□ -0.01
TTC28-203ENST00000442232 CA12O43570 354 aa14.97□□□□□ -0.01
TTC28-203ENST00000442232 VAMP4O75379 141 aa14.97□□□□□ -0.01
TTC28-203ENST00000442232 EGFRP00533 1210 aa14.97□□□□□ -0.01
TTC28-203ENST00000442232 USP17L8P0C7I0 530 aa14.97□□□□□ -0.01
TTC28-203ENST00000442232 FAM161AQ3B820 660 aa14.97□□□□□ -0.01
TTC28-203ENST00000442232 CHMP3Q9Y3E7 222 aa14.97□□□□□ -0.01
TTC28-203ENST00000442232 MYO3BQ8WXR4 1341 aa14.96□□□□□ -0.01
TTC28-203ENST00000442232 ANKRD18BA2A2Z9 1011 aa14.96□□□□□ -0.01
TTC28-203ENST00000442232 BRPF1P55201 1214 aaPredicted RBP14.96□□□□□ -0.01
TTC28-203ENST00000442232 ZNF280AP59817 542 aaPredicted RBP14.96□□□□□ -0.01
TTC28-203ENST00000442232 NOGQ13253 232 aa14.96□□□□□ -0.01
TTC28-203ENST00000442232 OGFOD1Q8N543 542 aa14.96□□□□□ -0.01
TTC28-203ENST00000442232 COA1Q9GZY4 146 aa14.96□□□□□ -0.01
TTC28-203ENST00000442232 MYOZ2Q9NPC6 264 aa14.96□□□□□ -0.01
TTC28-203ENST00000442232 ZNF804BA4D1E1 1349 aa14.95□□□□□ -0.02
TTC28-203ENST00000442232 SCARF1Q14162 830 aa14.95□□□□□ -0.02
TTC28-203ENST00000442232 ANGEL2Q5VTE6 544 aaKnown RBP14.95□□□□□ -0.02
TTC28-203ENST00000442232 IFIT5Q13325 482 aaKnown RBP14.94□□□□□ -0.02
TTC28-203ENST00000442232 TAF7LQ5H9L4 462 aa14.94□□□□□ -0.02
TTC28-203ENST00000442232 RGMBQ6NW40 437 aa14.94□□□□□ -0.02
TTC28-203ENST00000442232 PITPNM2Q9BZ72 1349 aa14.93□□□□□ -0.02
TTC28-203ENST00000442232 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
TTC28-203ENST00000442232 F6X3S4 739 aa14.93□□□□□ -0.02
TTC28-203ENST00000442232 CSF1RP07333 972 aa14.93□□□□□ -0.02
TTC28-203ENST00000442232 CASP7P55210 303 aa14.93□□□□□ -0.02
TTC28-203ENST00000442232 STRIP1Q5VSL9 837 aa14.93□□□□□ -0.02
TTC28-203ENST00000442232 CCDC102AQ96A19 550 aa14.93□□□□□ -0.02
TTC28-203ENST00000442232 CDCA5Q96FF9 252 aa14.93□□□□□ -0.02
TTC28-203ENST00000442232 C9orf78Q9NZ63 289 aaPredicted RBP14.93□□□□□ -0.02
TTC28-203ENST00000442232 ZNF646O15015 1829 aaPredicted RBP14.93□□□□□ -0.02
TTC28-203ENST00000442232 AKAP11Q9UKA4 1901 aa14.93□□□□□ -0.02
TTC28-203ENST00000442232 PAPPA2Q9BXP8 1791 aa14.93□□□□□ -0.02
TTC28-203ENST00000442232 MMP14P50281 582 aa14.92□□□□□ -0.02
TTC28-203ENST00000442232 ZNF157P51786 506 aaPredicted RBP14.92□□□□□ -0.02
TTC28-203ENST00000442232 CHRNDQ07001 517 aa14.92□□□□□ -0.02
TTC28-203ENST00000442232 CCDC57Q2TAC2 916 aa14.92□□□□□ -0.02
TTC28-203ENST00000442232 DACT2Q5SW24 774 aa14.92□□□□□ -0.02
TTC28-203ENST00000442232 BEND3Q5T5X7 828 aa14.92□□□□□ -0.02
TTC28-203ENST00000442232 DLK2Q6UY11 383 aa14.92□□□□□ -0.02
TTC28-203ENST00000442232 GMLQ99445 158 aa14.92□□□□□ -0.02
TTC28-203ENST00000442232 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
TTC28-203ENST00000442232 ASTN2O75129 1339 aaPredicted RBP14.92□□□□□ -0.02
TTC28-203ENST00000442232 GRM8O00222 908 aa14.91□□□□□ -0.02
TTC28-203ENST00000442232 NF2P35240 595 aa14.91□□□□□ -0.02
TTC28-203ENST00000442232 SLC4A10Q6U841 1118 aa14.91□□□□□ -0.02
TTC28-203ENST00000442232 SRCIN1Q9C0H9 1055 aa14.91□□□□□ -0.02
TTC28-203ENST00000442232 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
TTC28-203ENST00000442232 TSKSQ9UJT2 592 aa14.91□□□□□ -0.02
TTC28-203ENST00000442232 WTIPA6NIX2 430 aaPredicted RBP14.9□□□□□ -0.02
TTC28-203ENST00000442232 ALDH1L1O75891 902 aa14.9□□□□□ -0.02
TTC28-203ENST00000442232 FKBP1BP68106 108 aa14.9□□□□□ -0.02
TTC28-203ENST00000442232 TTLL5Q6EMB2 1281 aa14.9□□□□□ -0.02
TTC28-203ENST00000442232 ZNF804AQ7Z570 1209 aa14.9□□□□□ -0.02
TTC28-203ENST00000442232 GTF2IP78347 998 aa14.89□□□□□ -0.03
TTC28-203ENST00000442232 FOXO4P98177 505 aa14.89□□□□□ -0.03
TTC28-203ENST00000442232 TTLL12Q14166 644 aaPredicted RBP14.89□□□□□ -0.03
TTC28-203ENST00000442232 LMBR1LQ6UX01 489 aa14.89□□□□□ -0.03
TTC28-203ENST00000442232 TXNRD3Q86VQ6 643 aa14.89□□□□□ -0.03
TTC28-203ENST00000442232 MXD3Q9BW11 206 aa14.89□□□□□ -0.03
TTC28-203ENST00000442232 CNNM1Q9NRU3 951 aa14.89□□□□□ -0.03
TTC28-203ENST00000442232 CASP8AP2Q9UKL3 1982 aa14.89□□□□□ -0.03
TTC28-203ENST00000442232 ECM29Q5VYK3 1845 aa14.88□□□□□ -0.03
TTC28-203ENST00000442232 KLRK1P26718 216 aa14.88□□□□□ -0.03
TTC28-203ENST00000442232 APOBEC3FQ8IUX4 373 aaKnown RBP14.88□□□□□ -0.03
TTC28-203ENST00000442232 ABHD8Q96I13 439 aa14.88□□□□□ -0.03
TTC28-203ENST00000442232 WNT10BO00744 389 aa14.87□□□□□ -0.03
TTC28-203ENST00000442232 PLIN1O60240 522 aa14.87□□□□□ -0.03
TTC28-203ENST00000442232 TAF5LO75529 589 aa14.87□□□□□ -0.03
TTC28-203ENST00000442232 SLC10A3P09131 477 aa14.87□□□□□ -0.03
TTC28-203ENST00000442232 KIF23Q02241 960 aaPredicted RBP14.87□□□□□ -0.03
TTC28-203ENST00000442232 NBPF9Q3BBW0 867 aa14.87□□□□□ -0.03
TTC28-203ENST00000442232 LDHAL6AQ6ZMR3 332 aa14.87□□□□□ -0.03
TTC28-203ENST00000442232 KIAA0825Q8IV33 1275 aa14.87□□□□□ -0.03
TTC28-203ENST00000442232 HELBQ8NG08 1087 aaPredicted RBP14.87□□□□□ -0.03
TTC28-203ENST00000442232 CD209Q9NNX6 404 aa14.87□□□□□ -0.03
TTC28-203ENST00000442232 SAGE1Q9NXZ1 904 aa14.87□□□□□ -0.03
TTC28-203ENST00000442232 FAM155AB1AL88 458 aaPredicted RBP14.86□□□□□ -0.03
TTC28-203ENST00000442232 E9PSI1 815 aa14.86□□□□□ -0.03
TTC28-203ENST00000442232 SASH1O94885 1247 aa14.86□□□□□ -0.03
TTC28-203ENST00000442232 C15orf52Q6ZUT6 534 aaKnown RBP14.86□□□□□ -0.03
TTC28-203ENST00000442232 REM2Q8IYK8 340 aaPredicted RBP14.86□□□□□ -0.03
TTC28-203ENST00000442232 COL1A1P02452 1464 aaPredicted RBP14.85□□□□□ -0.03
TTC28-203ENST00000442232 DLGAP5Q15398 846 aa14.85□□□□□ -0.03
TTC28-203ENST00000442232 ZIC5Q96T25 663 aa14.85□□□□□ -0.03
TTC28-203ENST00000442232 ZNF521Q96K83 1311 aa14.85□□□□□ -0.03
TTC28-203ENST00000442232 MYO1BO43795 1136 aa14.84□□□□□ -0.03
TTC28-203ENST00000442232 EPHA10Q5JZY3 1008 aa14.84□□□□□ -0.03
TTC28-203ENST00000442232 RASAL3Q86YV0 1011 aa14.84□□□□□ -0.03
TTC28-203ENST00000442232 ZNF594Q96JF6 807 aaPredicted RBP14.84□□□□□ -0.03
TTC28-203ENST00000442232 SCAF8Q9UPN6 1271 aaKnown RBP14.84□□□□□ -0.03
TTC28-203ENST00000442232 PTPRCP08575 1304 aa14.84□□□□□ -0.03
TTC28-203ENST00000442232 ARAP2Q8WZ64 1704 aa14.83□□□□□ -0.03
TTC28-203ENST00000442232 CCDC85CA6NKD9 419 aa14.83□□□□□ -0.04
TTC28-203ENST00000442232 SNAP23O00161 211 aa14.83□□□□□ -0.04
TTC28-203ENST00000442232 IL1R1P14778 569 aa14.83□□□□□ -0.04
TTC28-203ENST00000442232 ARMC9Q7Z3E5 817 aa14.83□□□□□ -0.04
TTC28-203ENST00000442232 SUCLG2Q96I99 432 aa14.83□□□□□ -0.04
TTC28-203ENST00000442232 F8W031 263 aaPredicted RBP14.82□□□□□ -0.04
TTC28-203ENST00000442232 TRPA1O75762 1119 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms