RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 NOM1Q5C9Z4 860 aaKnown RBP18.26■□□□□ 0.51
PTPRN-205ENST00000440552 KSR2Q6VAB6 950 aa18.26■□□□□ 0.51
PTPRN-205ENST00000440552 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
PTPRN-205ENST00000440552 MYH3P11055 1940 aa18.25■□□□□ 0.51
PTPRN-205ENST00000440552 UBE2Q2LH0YL09 131 aa18.25■□□□□ 0.51
PTPRN-205ENST00000440552 IGKV5-2P06315 115 aa18.25■□□□□ 0.51
PTPRN-205ENST00000440552 NBPF9Q3BBW0 867 aa18.25■□□□□ 0.51
PTPRN-205ENST00000440552 STRIP1Q5VSL9 837 aa18.25■□□□□ 0.51
PTPRN-205ENST00000440552 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
PTPRN-205ENST00000440552 COA1Q9GZY4 146 aa18.25■□□□□ 0.51
PTPRN-205ENST00000440552 ZNF646O15015 1829 aaPredicted RBP18.24■□□□□ 0.51
PTPRN-205ENST00000440552 TM4SF4P48230 202 aa18.24■□□□□ 0.51
PTPRN-205ENST00000440552 CCT4P50991 539 aaKnown RBP18.24■□□□□ 0.51
PTPRN-205ENST00000440552 MOB2Q70IA6 237 aa18.24■□□□□ 0.51
PTPRN-205ENST00000440552 GREM2Q9H772 168 aa18.24■□□□□ 0.51
PTPRN-205ENST00000440552 PRKRIP1Q9H875 184 aaPredicted RBP18.24■□□□□ 0.51
PTPRN-205ENST00000440552 LEMD3Q9Y2U8 911 aa18.24■□□□□ 0.51
PTPRN-205ENST00000440552 PI4KAP2A4QPH2 592 aa18.23■□□□□ 0.51
PTPRN-205ENST00000440552 WTIPA6NIX2 430 aaPredicted RBP18.23■□□□□ 0.51
PTPRN-205ENST00000440552 WNT10BO00744 389 aa18.23■□□□□ 0.51
PTPRN-205ENST00000440552 NF2P35240 595 aa18.23■□□□□ 0.51
PTPRN-205ENST00000440552 NEXNQ0ZGT2 675 aa18.23■□□□□ 0.51
PTPRN-205ENST00000440552 PI4KAP1Q8N8J0 262 aa18.23■□□□□ 0.51
PTPRN-205ENST00000440552 HPS5Q9UPZ3 1129 aa18.23■□□□□ 0.51
PTPRN-205ENST00000440552 ZNF296Q8WUU4 475 aaPredicted RBP18.22■□□□□ 0.51
PTPRN-205ENST00000440552 CFHR5Q9BXR6 569 aa18.22■□□□□ 0.51
PTPRN-205ENST00000440552 H7C1W4 665 aa18.21■□□□□ 0.51
PTPRN-205ENST00000440552 PRAMEF18Q5VWM3 479 aa18.21■□□□□ 0.51
PTPRN-205ENST00000440552 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
PTPRN-205ENST00000440552 MXD3Q9BW11 206 aa18.21■□□□□ 0.51
PTPRN-205ENST00000440552 HDAC9Q9UKV0 1011 aa18.21■□□□□ 0.51
PTPRN-205ENST00000440552 SCAF8Q9UPN6 1271 aaKnown RBP18.21■□□□□ 0.51
PTPRN-205ENST00000440552 NEURL1BA8MQ27 555 aa18.2■□□□□ 0.5
PTPRN-205ENST00000440552 TBC1D8O95759 1140 aa18.2■□□□□ 0.5
PTPRN-205ENST00000440552 IGHMBP2P38935 993 aaKnown RBP18.2■□□□□ 0.5
PTPRN-205ENST00000440552 TTLL12Q14166 644 aaPredicted RBP18.2■□□□□ 0.5
PTPRN-205ENST00000440552 APOBEC3FQ8IUX4 373 aaKnown RBP18.2■□□□□ 0.5
PTPRN-205ENST00000440552 ZBED3Q96IU2 234 aaPredicted RBP18.2■□□□□ 0.5
PTPRN-205ENST00000440552 PLA2G12BQ9BX93 195 aa18.2■□□□□ 0.5
PTPRN-205ENST00000440552 STK31Q9BXU1 1019 aa18.2■□□□□ 0.5
PTPRN-205ENST00000440552 ANKRD2Q9GZV1 360 aa18.2■□□□□ 0.5
PTPRN-205ENST00000440552 SPEF2Q9C093 1822 aa18.19■□□□□ 0.5
PTPRN-205ENST00000440552 GPR25O00155 361 aa18.19■□□□□ 0.5
PTPRN-205ENST00000440552 SREBF2Q12772 1141 aa18.19■□□□□ 0.5
PTPRN-205ENST00000440552 PRPF38BQ5VTL8 546 aaKnown RBP18.19■□□□□ 0.5
PTPRN-205ENST00000440552 TTLL5Q6EMB2 1281 aa18.19■□□□□ 0.5
PTPRN-205ENST00000440552 ARMC9Q7Z3E5 817 aa18.19■□□□□ 0.5
PTPRN-205ENST00000440552 TXNRD3Q86VQ6 643 aa18.19■□□□□ 0.5
PTPRN-205ENST00000440552 ZNF804BA4D1E1 1349 aa18.19■□□□□ 0.5
PTPRN-205ENST00000440552 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
PTPRN-205ENST00000440552 LDLRAD1Q5T700 205 aa18.18■□□□□ 0.5
PTPRN-205ENST00000440552 UBE3BQ7Z3V4 1068 aa18.18■□□□□ 0.5
PTPRN-205ENST00000440552 SASH1O94885 1247 aa18.17■□□□□ 0.5
PTPRN-205ENST00000440552 PTPN12Q05209 780 aaKnown RBP18.17■□□□□ 0.5
PTPRN-205ENST00000440552 FBXO46Q6PJ61 603 aaPredicted RBP18.17■□□□□ 0.5
PTPRN-205ENST00000440552 FBXW7Q969H0 707 aa18.17■□□□□ 0.5
PTPRN-205ENST00000440552 COL1A1P02452 1464 aaPredicted RBP18.17■□□□□ 0.5
PTPRN-205ENST00000440552 CSF1RP07333 972 aa18.16■□□□□ 0.5
PTPRN-205ENST00000440552 ITGA6P23229 1130 aa18.16■□□□□ 0.5
PTPRN-205ENST00000440552 GCKRQ14397 625 aa18.16■□□□□ 0.5
PTPRN-205ENST00000440552 FKTNO75072 461 aa18.15■□□□□ 0.5
PTPRN-205ENST00000440552 ALDH1A1P00352 501 aa18.15■□□□□ 0.5
PTPRN-205ENST00000440552 KLRK1P26718 216 aa18.15■□□□□ 0.5
PTPRN-205ENST00000440552 CASP7P55210 303 aa18.15■□□□□ 0.5
PTPRN-205ENST00000440552 CCDC27Q2M243 656 aa18.15■□□□□ 0.5
PTPRN-205ENST00000440552 SPRYD7Q5W111 196 aa18.15■□□□□ 0.5
PTPRN-205ENST00000440552 G2E3Q7L622 706 aa18.15■□□□□ 0.5
PTPRN-205ENST00000440552 KIAA0825Q8IV33 1275 aa18.15■□□□□ 0.5
PTPRN-205ENST00000440552 MTMR14Q8NCE2 650 aa18.15■□□□□ 0.5
PTPRN-205ENST00000440552 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
PTPRN-205ENST00000440552 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
PTPRN-205ENST00000440552 INHBEP58166 350 aa18.14■□□□□ 0.49
PTPRN-205ENST00000440552 GTF2IP78347 998 aa18.14■□□□□ 0.49
PTPRN-205ENST00000440552 MAP3K11Q16584 847 aa18.14■□□□□ 0.49
PTPRN-205ENST00000440552 TWISTNBQ3B726 338 aaPredicted RBP18.14■□□□□ 0.49
PTPRN-205ENST00000440552 C15orf52Q6ZUT6 534 aaKnown RBP18.14■□□□□ 0.49
PTPRN-205ENST00000440552 TSR2Q969E8 191 aaKnown RBP18.14■□□□□ 0.49
PTPRN-205ENST00000440552 MYH16Q9H6N6 1097 aa18.14■□□□□ 0.49
PTPRN-205ENST00000440552 CACNA1FO60840 1977 aa18.13■□□□□ 0.49
PTPRN-205ENST00000440552 UNCXA6NJT0 531 aa18.13■□□□□ 0.49
PTPRN-205ENST00000440552 MKRN3Q13064 507 aaKnown RBP18.13■□□□□ 0.49
PTPRN-205ENST00000440552 DEFB129Q9H1M3 183 aa18.13■□□□□ 0.49
PTPRN-205ENST00000440552 CD209Q9NNX6 404 aa18.13■□□□□ 0.49
PTPRN-205ENST00000440552 ANGEL1Q9UNK9 670 aaKnown RBP18.13■□□□□ 0.49
PTPRN-205ENST00000440552 PPP2R3BQ9Y5P8 575 aa18.13■□□□□ 0.49
PTPRN-205ENST00000440552 IRS2Q9Y4H2 1338 aa18.13■□□□□ 0.49
PTPRN-205ENST00000440552 MANSC4A6NHS7 340 aaPredicted RBP18.12■□□□□ 0.49
PTPRN-205ENST00000440552 KCNJ4P48050 445 aa18.12■□□□□ 0.49
PTPRN-205ENST00000440552 CHRNDQ07001 517 aa18.12■□□□□ 0.49
PTPRN-205ENST00000440552 DLGAP5Q15398 846 aa18.12■□□□□ 0.49
PTPRN-205ENST00000440552 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
PTPRN-205ENST00000440552 LINS1Q8NG48 757 aa18.12■□□□□ 0.49
PTPRN-205ENST00000440552 R3HDMLQ9H3Y0 253 aa18.12■□□□□ 0.49
PTPRN-205ENST00000440552 IL16Q14005 1332 aa18.12■□□□□ 0.49
PTPRN-205ENST00000440552 ZBTB48P10074 688 aaPredicted RBP18.11■□□□□ 0.49
PTPRN-205ENST00000440552 FKBP1AP62942 108 aaKnown RBP18.11■□□□□ 0.49
PTPRN-205ENST00000440552 FLIIQ13045 1269 aa18.11■□□□□ 0.49
PTPRN-205ENST00000440552 PRKG1Q13976 671 aa18.11■□□□□ 0.49
PTPRN-205ENST00000440552 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
PTPRN-205ENST00000440552 DNAAF4Q8WXU2 420 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms