RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 CCDC85AQ96PX6 553 aaPredicted RBP17.21■□□□□ 0.35
FAM3A-213ENST00000440318 FZD1Q9UP38 647 aa17.21■□□□□ 0.35
FAM3A-213ENST00000440318 XDHP47989 1333 aa17.21■□□□□ 0.34
FAM3A-213ENST00000440318 CHL1O00533 1208 aa17.2■□□□□ 0.34
FAM3A-213ENST00000440318 NF2P35240 595 aa17.2■□□□□ 0.34
FAM3A-213ENST00000440318 TMPOP42166 694 aaKnown RBP17.2■□□□□ 0.34
FAM3A-213ENST00000440318 DACT2Q5SW24 774 aa17.2■□□□□ 0.34
FAM3A-213ENST00000440318 LDLRAD1Q5T700 205 aa17.2■□□□□ 0.34
FAM3A-213ENST00000440318 PODNQ7Z5L7 613 aa17.2■□□□□ 0.34
FAM3A-213ENST00000440318 ZBTB38Q8NAP3 1195 aaPredicted RBP17.2■□□□□ 0.34
FAM3A-213ENST00000440318 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
FAM3A-213ENST00000440318 RUNDC1Q96C34 613 aa17.19■□□□□ 0.34
FAM3A-213ENST00000440318 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
FAM3A-213ENST00000440318 EN2P19622 333 aaPredicted RBP17.18■□□□□ 0.34
FAM3A-213ENST00000440318 ATP2B4P23634 1241 aa17.18■□□□□ 0.34
FAM3A-213ENST00000440318 ARMC9Q7Z3E5 817 aa17.18■□□□□ 0.34
FAM3A-213ENST00000440318 IFNL1Q8IU54 200 aa17.18■□□□□ 0.34
FAM3A-213ENST00000440318 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
FAM3A-213ENST00000440318 KIAA0100Q14667 2235 aaKnown RBP17.18■□□□□ 0.34
FAM3A-213ENST00000440318 IGF2BP3O00425 579 aaKnown RBP eCLIP17.17■□□□□ 0.34
FAM3A-213ENST00000440318 ALDH1A1P00352 501 aa17.17■□□□□ 0.34
FAM3A-213ENST00000440318 LMOD3Q0VAK6 560 aa17.17■□□□□ 0.34
FAM3A-213ENST00000440318 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
FAM3A-213ENST00000440318 ANGEL1Q9UNK9 670 aaKnown RBP17.17■□□□□ 0.34
FAM3A-213ENST00000440318 PTPN22Q9Y2R2 807 aa17.17■□□□□ 0.34
FAM3A-213ENST00000440318 LAS1LQ9Y4W2 734 aaKnown RBP17.17■□□□□ 0.34
FAM3A-213ENST00000440318 MED23Q9ULK4 1368 aa17.16■□□□□ 0.34
FAM3A-213ENST00000440318 LAMB1P07942 1786 aa17.16■□□□□ 0.34
FAM3A-213ENST00000440318 CAP1Q01518 475 aa17.16■□□□□ 0.34
FAM3A-213ENST00000440318 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
FAM3A-213ENST00000440318 OGFOD1Q8N543 542 aa17.16■□□□□ 0.34
FAM3A-213ENST00000440318 FBXW7Q969H0 707 aa17.16■□□□□ 0.34
FAM3A-213ENST00000440318 ARMC5Q96C12 935 aa17.16■□□□□ 0.34
FAM3A-213ENST00000440318 HYPKQ9NX55 129 aa17.16■□□□□ 0.34
FAM3A-213ENST00000440318 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.16■□□□□ 0.34
FAM3A-213ENST00000440318 COLQQ9Y215 455 aaPredicted RBP17.16■□□□□ 0.34
FAM3A-213ENST00000440318 SSC5DA1L4H1 1573 aa17.15■□□□□ 0.34
FAM3A-213ENST00000440318 MANSC4A6NHS7 340 aaPredicted RBP17.15■□□□□ 0.34
FAM3A-213ENST00000440318 PDE8AO60658 829 aa17.15■□□□□ 0.34
FAM3A-213ENST00000440318 HOXB7P09629 217 aa17.15■□□□□ 0.34
FAM3A-213ENST00000440318 NEUROD2Q15784 382 aa17.15■□□□□ 0.34
FAM3A-213ENST00000440318 CD99L2Q8TCZ2 262 aa17.15■□□□□ 0.34
FAM3A-213ENST00000440318 CLMNQ96JQ2 1002 aa17.15■□□□□ 0.34
FAM3A-213ENST00000440318 SPEF2Q9C093 1822 aa17.14■□□□□ 0.34
FAM3A-213ENST00000440318 PCCAP05165 728 aaPredicted RBP17.14■□□□□ 0.33
FAM3A-213ENST00000440318 STRIP1Q5VSL9 837 aa17.14■□□□□ 0.33
FAM3A-213ENST00000440318 RIC3Q7Z5B4 369 aa17.14■□□□□ 0.33
FAM3A-213ENST00000440318 TXNRD3Q86VQ6 643 aa17.14■□□□□ 0.33
FAM3A-213ENST00000440318 APOBEC3FQ8IUX4 373 aaKnown RBP17.14■□□□□ 0.33
FAM3A-213ENST00000440318 MYD88Q99836 296 aa17.14■□□□□ 0.33
FAM3A-213ENST00000440318 MYO3BQ8WXR4 1341 aa17.14■□□□□ 0.33
FAM3A-213ENST00000440318 APAF1O14727 1248 aa17.13■□□□□ 0.33
FAM3A-213ENST00000440318 CRHR2Q13324 411 aa17.13■□□□□ 0.33
FAM3A-213ENST00000440318 SLC10A4Q96EP9 437 aa17.13■□□□□ 0.33
FAM3A-213ENST00000440318 ERO1AQ96HE7 468 aa17.13■□□□□ 0.33
FAM3A-213ENST00000440318 ZBED3Q96IU2 234 aaPredicted RBP17.13■□□□□ 0.33
FAM3A-213ENST00000440318 WNK4Q96J92 1243 aa17.13■□□□□ 0.33
FAM3A-213ENST00000440318 PHAXQ9H814 394 aaKnown RBP17.13■□□□□ 0.33
FAM3A-213ENST00000440318 TRIM35Q9UPQ4 493 aa17.13■□□□□ 0.33
FAM3A-213ENST00000440318 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
FAM3A-213ENST00000440318 ZBTB48P10074 688 aaPredicted RBP17.12■□□□□ 0.33
FAM3A-213ENST00000440318 HSP90B1P14625 803 aaKnown RBP17.12■□□□□ 0.33
FAM3A-213ENST00000440318 INHBEP58166 350 aa17.12■□□□□ 0.33
FAM3A-213ENST00000440318 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
FAM3A-213ENST00000440318 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
FAM3A-213ENST00000440318 KIAA0825Q8IV33 1275 aa17.12■□□□□ 0.33
FAM3A-213ENST00000440318 MINPP1Q9UNW1 487 aa17.12■□□□□ 0.33
FAM3A-213ENST00000440318 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
FAM3A-213ENST00000440318 KLRK1P26718 216 aa17.11■□□□□ 0.33
FAM3A-213ENST00000440318 MAP3K11Q16584 847 aa17.11■□□□□ 0.33
FAM3A-213ENST00000440318 CCDC191Q8NCU4 936 aa17.11■□□□□ 0.33
FAM3A-213ENST00000440318 COA1Q9GZY4 146 aa17.11■□□□□ 0.33
FAM3A-213ENST00000440318 DEFB129Q9H1M3 183 aa17.11■□□□□ 0.33
FAM3A-213ENST00000440318 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
FAM3A-213ENST00000440318 GJA5P36382 358 aa17.1■□□□□ 0.33
FAM3A-213ENST00000440318 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
FAM3A-213ENST00000440318 ZNF333Q96JL9 665 aa17.1■□□□□ 0.33
FAM3A-213ENST00000440318 EFCC1Q9HA90 598 aa17.1■□□□□ 0.33
FAM3A-213ENST00000440318 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
FAM3A-213ENST00000440318 TRIOBPQ9H2D6 2365 aa17.09■□□□□ 0.33
FAM3A-213ENST00000440318 CTSWP56202 376 aa17.09■□□□□ 0.33
FAM3A-213ENST00000440318 CDC5LQ99459 802 aaKnown RBP17.09■□□□□ 0.33
FAM3A-213ENST00000440318 PTPN18Q99952 460 aa17.09■□□□□ 0.33
FAM3A-213ENST00000440318 GREM2Q9H772 168 aa17.09■□□□□ 0.33
FAM3A-213ENST00000440318 BSDC1Q9NW68 430 aaPredicted RBP17.09■□□□□ 0.33
FAM3A-213ENST00000440318 PCDHAC2Q9Y5I4 1007 aa17.09■□□□□ 0.33
FAM3A-213ENST00000440318 TTLL5Q6EMB2 1281 aa17.08■□□□□ 0.32
FAM3A-213ENST00000440318 H0YGN5 161 aa17.07■□□□□ 0.32
FAM3A-213ENST00000440318 MMP14P50281 582 aa17.07■□□□□ 0.32
FAM3A-213ENST00000440318 GTF2IP78347 998 aa17.07■□□□□ 0.32
FAM3A-213ENST00000440318 SP3Q02447 781 aa17.07■□□□□ 0.32
FAM3A-213ENST00000440318 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
FAM3A-213ENST00000440318 TMEM106CQ9BVX2 250 aa17.07■□□□□ 0.32
FAM3A-213ENST00000440318 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
FAM3A-213ENST00000440318 CEP290O15078 2479 aa17.06■□□□□ 0.32
FAM3A-213ENST00000440318 AOX1Q06278 1338 aa17.06■□□□□ 0.32
FAM3A-213ENST00000440318 CERS5Q8N5B7 392 aa17.06■□□□□ 0.32
FAM3A-213ENST00000440318 OTUD5Q96G74 571 aa17.06■□□□□ 0.32
FAM3A-213ENST00000440318 METTL22Q9BUU2 404 aaPredicted RBP17.06■□□□□ 0.32
FAM3A-213ENST00000440318 PTCH2Q9Y6C5 1203 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms