RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 DDX58O95786 925 aaKnown RBP26.6■■□□□ 1.85
TRIM39-210ENST00000440271 GNAI1P63096 354 aa26.6■■□□□ 1.85
TRIM39-210ENST00000440271 OGFOD1Q8N543 542 aa26.6■■□□□ 1.85
TRIM39-210ENST00000440271 BSDC1Q9NW68 430 aaPredicted RBP26.6■■□□□ 1.85
TRIM39-210ENST00000440271 MED23Q9ULK4 1368 aa26.59■■□□□ 1.85
TRIM39-210ENST00000440271 WNT10BO00744 389 aa26.59■■□□□ 1.85
TRIM39-210ENST00000440271 CTSWP56202 376 aa26.59■■□□□ 1.85
TRIM39-210ENST00000440271 C8orf58Q8NAV2 365 aa26.59■■□□□ 1.85
TRIM39-210ENST00000440271 TTLL11Q8NHH1 800 aa26.59■■□□□ 1.85
TRIM39-210ENST00000440271 GPR25O00155 361 aa26.58■■□□□ 1.85
TRIM39-210ENST00000440271 NF2P35240 595 aa26.58■■□□□ 1.85
TRIM39-210ENST00000440271 DDX10Q13206 875 aaKnown RBP26.58■■□□□ 1.85
TRIM39-210ENST00000440271 MAP3K2Q9Y2U5 619 aa26.58■■□□□ 1.85
TRIM39-210ENST00000440271 CCT4P50991 539 aaKnown RBP26.57■■□□□ 1.84
TRIM39-210ENST00000440271 MKRN3Q13064 507 aaKnown RBP26.57■■□□□ 1.84
TRIM39-210ENST00000440271 NOM1Q5C9Z4 860 aaKnown RBP26.57■■□□□ 1.84
TRIM39-210ENST00000440271 STRIP1Q5VSL9 837 aa26.57■■□□□ 1.84
TRIM39-210ENST00000440271 FBXW7Q969H0 707 aa26.57■■□□□ 1.84
TRIM39-210ENST00000440271 CALD1Q05682 793 aaKnown RBP26.56■■□□□ 1.84
TRIM39-210ENST00000440271 CCDC30Q5VVM6 783 aa26.56■■□□□ 1.84
TRIM39-210ENST00000440271 COA1Q9GZY4 146 aa26.56■■□□□ 1.84
TRIM39-210ENST00000440271 GREM2Q9H772 168 aa26.56■■□□□ 1.84
TRIM39-210ENST00000440271 MYO3BQ8WXR4 1341 aa26.56■■□□□ 1.84
TRIM39-210ENST00000440271 APAF1O14727 1248 aa26.55■■□□□ 1.84
TRIM39-210ENST00000440271 IGKV5-2P06315 115 aa26.55■■□□□ 1.84
TRIM39-210ENST00000440271 CHMP4AQ9BY43 222 aa26.55■■□□□ 1.84
TRIM39-210ENST00000440271 PTPN12Q05209 780 aaKnown RBP26.54■■□□□ 1.84
TRIM39-210ENST00000440271 SREBF2Q12772 1141 aa26.54■■□□□ 1.84
TRIM39-210ENST00000440271 KSR2Q6VAB6 950 aa26.54■■□□□ 1.84
TRIM39-210ENST00000440271 TXNRD3Q86VQ6 643 aa26.54■■□□□ 1.84
TRIM39-210ENST00000440271 PI4KAP2A4QPH2 592 aa26.53■■□□□ 1.84
TRIM39-210ENST00000440271 SASH1O94885 1247 aa26.53■■□□□ 1.84
TRIM39-210ENST00000440271 MMP14P50281 582 aa26.53■■□□□ 1.84
TRIM39-210ENST00000440271 FBXO46Q6PJ61 603 aaPredicted RBP26.53■■□□□ 1.84
TRIM39-210ENST00000440271 ARMC9Q7Z3E5 817 aa26.53■■□□□ 1.84
TRIM39-210ENST00000440271 PI4KAP1Q8N8J0 262 aa26.53■■□□□ 1.84
TRIM39-210ENST00000440271 PRKG1Q13976 671 aa26.52■■□□□ 1.84
TRIM39-210ENST00000440271 CFHR5Q9BXR6 569 aa26.52■■□□□ 1.84
TRIM39-210ENST00000440271 LEMD3Q9Y2U8 911 aa26.52■■□□□ 1.84
TRIM39-210ENST00000440271 FKTNO75072 461 aa26.51■■□□□ 1.83
TRIM39-210ENST00000440271 TTLL5Q6EMB2 1281 aa26.51■■□□□ 1.83
TRIM39-210ENST00000440271 R3HDMLQ9H3Y0 253 aa26.51■■□□□ 1.83
TRIM39-210ENST00000440271 LDLRAD1Q5T700 205 aa26.5■■□□□ 1.83
TRIM39-210ENST00000440271 APOBEC3FQ8IUX4 373 aaKnown RBP26.5■■□□□ 1.83
TRIM39-210ENST00000440271 TSPYL6Q8N831 410 aa26.5■■□□□ 1.83
TRIM39-210ENST00000440271 NEXNQ0ZGT2 675 aa26.49■■□□□ 1.83
TRIM39-210ENST00000440271 CWF19L2Q2TBE0 894 aaKnown RBP26.49■■□□□ 1.83
TRIM39-210ENST00000440271 SPRYD7Q5W111 196 aa26.49■■□□□ 1.83
TRIM39-210ENST00000440271 KIAA0825Q8IV33 1275 aa26.49■■□□□ 1.83
TRIM39-210ENST00000440271 ZNF804BA4D1E1 1349 aa26.48■■□□□ 1.83
TRIM39-210ENST00000440271 IGHMBP2P38935 993 aaKnown RBP26.48■■□□□ 1.83
TRIM39-210ENST00000440271 ZBED3Q96IU2 234 aaPredicted RBP26.48■■□□□ 1.83
TRIM39-210ENST00000440271 ANGEL1Q9UNK9 670 aaKnown RBP26.48■■□□□ 1.83
TRIM39-210ENST00000440271 ZNF646O15015 1829 aaPredicted RBP26.48■■□□□ 1.83
TRIM39-210ENST00000440271 NEURL1BA8MQ27 555 aa26.47■■□□□ 1.83
TRIM39-210ENST00000440271 H7C1W4 665 aa26.47■■□□□ 1.83
TRIM39-210ENST00000440271 KLRK1P26718 216 aa26.47■■□□□ 1.83
TRIM39-210ENST00000440271 ANKRD2Q9GZV1 360 aa26.47■■□□□ 1.83
TRIM39-210ENST00000440271 GTF2IP78347 998 aa26.46■■□□□ 1.83
TRIM39-210ENST00000440271 UBE3BQ7Z3V4 1068 aa26.46■■□□□ 1.83
TRIM39-210ENST00000440271 SPEF2Q9C093 1822 aa26.45■■□□□ 1.82
TRIM39-210ENST00000440271 ALDH1A1P00352 501 aa26.45■■□□□ 1.82
TRIM39-210ENST00000440271 FZD1Q9UP38 647 aa26.45■■□□□ 1.82
TRIM39-210ENST00000440271 ITGA6P23229 1130 aa26.44■■□□□ 1.82
TRIM39-210ENST00000440271 STK31Q9BXU1 1019 aa26.44■■□□□ 1.82
TRIM39-210ENST00000440271 DEFB129Q9H1M3 183 aa26.44■■□□□ 1.82
TRIM39-210ENST00000440271 MYH3P11055 1940 aa26.43■■□□□ 1.82
TRIM39-210ENST00000440271 INHBEP58166 350 aa26.43■■□□□ 1.82
TRIM39-210ENST00000440271 SLC10A4Q96EP9 437 aa26.43■■□□□ 1.82
TRIM39-210ENST00000440271 MPHOSPH8Q99549 860 aa26.43■■□□□ 1.82
TRIM39-210ENST00000440271 MANSC4A6NHS7 340 aaPredicted RBP26.42■■□□□ 1.82
TRIM39-210ENST00000440271 PLA2G12BQ9BX93 195 aa26.42■■□□□ 1.82
TRIM39-210ENST00000440271 KCNJ4P48050 445 aa26.41■■□□□ 1.82
TRIM39-210ENST00000440271 DLGAP5Q15398 846 aa26.41■■□□□ 1.82
TRIM39-210ENST00000440271 MAP3K11Q16584 847 aa26.41■■□□□ 1.82
TRIM39-210ENST00000440271 G2E3Q7L622 706 aa26.41■■□□□ 1.82
TRIM39-210ENST00000440271 IFNL1Q8IU54 200 aa26.41■■□□□ 1.82
TRIM39-210ENST00000440271 PRKRIP1Q9H875 184 aaPredicted RBP26.41■■□□□ 1.82
TRIM39-210ENST00000440271 CD209Q9NNX6 404 aa26.41■■□□□ 1.82
TRIM39-210ENST00000440271 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.41■■□□□ 1.82
TRIM39-210ENST00000440271 CSF1RP07333 972 aa26.4■■□□□ 1.82
TRIM39-210ENST00000440271 CHRNDQ07001 517 aa26.4■■□□□ 1.82
TRIM39-210ENST00000440271 GCKRQ14397 625 aa26.4■■□□□ 1.82
TRIM39-210ENST00000440271 TSR2Q969E8 191 aaKnown RBP26.4■■□□□ 1.82
TRIM39-210ENST00000440271 TRIM17Q9Y577 477 aa26.4■■□□□ 1.82
TRIM39-210ENST00000440271 COL1A1P02452 1464 aaPredicted RBP26.39■■□□□ 1.82
TRIM39-210ENST00000440271 CERS5Q8N5B7 392 aa26.39■■□□□ 1.82
TRIM39-210ENST00000440271 PPP1R12BO60237 982 aaPredicted RBP26.38■■□□□ 1.81
TRIM39-210ENST00000440271 SLC4A2P04920 1241 aa26.38■■□□□ 1.81
TRIM39-210ENST00000440271 ZBTB48P10074 688 aaPredicted RBP26.38■■□□□ 1.81
TRIM39-210ENST00000440271 CASP7P55210 303 aa26.38■■□□□ 1.81
TRIM39-210ENST00000440271 MTMR14Q8NCE2 650 aa26.38■■□□□ 1.81
TRIM39-210ENST00000440271 CLMNQ96JQ2 1002 aa26.38■■□□□ 1.81
TRIM39-210ENST00000440271 OTOP1Q7RTM1 612 aa26.37■■□□□ 1.81
TRIM39-210ENST00000440271 WNK4Q96J92 1243 aa26.37■■□□□ 1.81
TRIM39-210ENST00000440271 PCDHAC2Q9Y5I4 1007 aa26.37■■□□□ 1.81
TRIM39-210ENST00000440271 PPP2R3BQ9Y5P8 575 aa26.37■■□□□ 1.81
TRIM39-210ENST00000440271 SNAP23O00161 211 aa26.36■■□□□ 1.81
TRIM39-210ENST00000440271 IGF2BP3O00425 579 aaKnown RBP eCLIP26.36■■□□□ 1.81
TRIM39-210ENST00000440271 TWISTNBQ3B726 338 aaPredicted RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms