RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 TRIM28Q13263 835 aaKnown RBP17.77■□□□□ 0.44
SMC2-204ENST00000440179 TTLL12Q14166 644 aaPredicted RBP17.77■□□□□ 0.44
SMC2-204ENST00000440179 TRIOBPQ9H2D6 2365 aa17.76■□□□□ 0.43
SMC2-204ENST00000440179 USP17L3A6NCW0 530 aa17.76■□□□□ 0.43
SMC2-204ENST00000440179 USP17L4A6NCW7 530 aa17.76■□□□□ 0.43
SMC2-204ENST00000440179 PTPN12Q05209 780 aaKnown RBP17.76■□□□□ 0.43
SMC2-204ENST00000440179 SREBF2Q12772 1141 aa17.76■□□□□ 0.43
SMC2-204ENST00000440179 USP17L1Q7RTZ2 530 aa17.76■□□□□ 0.43
SMC2-204ENST00000440179 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
SMC2-204ENST00000440179 ZNF646O15015 1829 aaPredicted RBP17.75■□□□□ 0.43
SMC2-204ENST00000440179 CHL1O00533 1208 aa17.75■□□□□ 0.43
SMC2-204ENST00000440179 FXR1P51114 621 aaKnown RBP eCLIP17.75■□□□□ 0.43
SMC2-204ENST00000440179 WTIPA6NIX2 430 aaPredicted RBP17.74■□□□□ 0.43
SMC2-204ENST00000440179 TMPOP42166 694 aaKnown RBP17.74■□□□□ 0.43
SMC2-204ENST00000440179 HDGFL1Q5TGJ6 251 aa17.74■□□□□ 0.43
SMC2-204ENST00000440179 MXD3Q9BW11 206 aa17.74■□□□□ 0.43
SMC2-204ENST00000440179 XDHP47989 1333 aa17.73■□□□□ 0.43
SMC2-204ENST00000440179 WNT10BO00744 389 aa17.73■□□□□ 0.43
SMC2-204ENST00000440179 LDLRAD1Q5T700 205 aa17.73■□□□□ 0.43
SMC2-204ENST00000440179 SPRYD7Q5W111 196 aa17.73■□□□□ 0.43
SMC2-204ENST00000440179 PODNQ7Z5L7 613 aa17.73■□□□□ 0.43
SMC2-204ENST00000440179 ZBTB38Q8NAP3 1195 aaPredicted RBP17.73■□□□□ 0.43
SMC2-204ENST00000440179 DBF4Q9UBU7 674 aaPredicted RBP17.73■□□□□ 0.43
SMC2-204ENST00000440179 TRIM17Q9Y577 477 aa17.73■□□□□ 0.43
SMC2-204ENST00000440179 RBBP6Q7Z6E9 1792 aaKnown RBP17.73■□□□□ 0.43
SMC2-204ENST00000440179 DACT2Q5SW24 774 aa17.72■□□□□ 0.43
SMC2-204ENST00000440179 OTOP1Q7RTM1 612 aa17.72■□□□□ 0.43
SMC2-204ENST00000440179 A0A0C4DFX4 3053 aa17.72■□□□□ 0.43
SMC2-204ENST00000440179 SASH1O94885 1247 aa17.71■□□□□ 0.43
SMC2-204ENST00000440179 HOXB7P09629 217 aa17.71■□□□□ 0.43
SMC2-204ENST00000440179 NF2P35240 595 aa17.71■□□□□ 0.43
SMC2-204ENST00000440179 LMOD3Q0VAK6 560 aa17.71■□□□□ 0.43
SMC2-204ENST00000440179 PRKG1Q13976 671 aa17.71■□□□□ 0.43
SMC2-204ENST00000440179 INTS3Q68E01 1043 aaKnown RBP17.71■□□□□ 0.43
SMC2-204ENST00000440179 CCDC85AQ96PX6 553 aaPredicted RBP17.71■□□□□ 0.43
SMC2-204ENST00000440179 ALDH1A1P00352 501 aa17.7■□□□□ 0.42
SMC2-204ENST00000440179 ATP2B4P23634 1241 aa17.7■□□□□ 0.42
SMC2-204ENST00000440179 CCDC152Q4G0S7 254 aa17.7■□□□□ 0.42
SMC2-204ENST00000440179 ARMC9Q7Z3E5 817 aa17.7■□□□□ 0.42
SMC2-204ENST00000440179 HYPKQ9NX55 129 aa17.7■□□□□ 0.42
SMC2-204ENST00000440179 MED23Q9ULK4 1368 aa17.69■□□□□ 0.42
SMC2-204ENST00000440179 IFNL1Q8IU54 200 aa17.69■□□□□ 0.42
SMC2-204ENST00000440179 JARID2Q92833 1246 aaPredicted RBP17.69■□□□□ 0.42
SMC2-204ENST00000440179 FZD1Q9UP38 647 aa17.69■□□□□ 0.42
SMC2-204ENST00000440179 IGF2BP3O00425 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMC2-204ENST00000440179 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
SMC2-204ENST00000440179 EN2P19622 333 aaPredicted RBP17.68■□□□□ 0.42
SMC2-204ENST00000440179 ANKRD18AQ8IVF6 992 aa17.68■□□□□ 0.42
SMC2-204ENST00000440179 OGFOD1Q8N543 542 aa17.68■□□□□ 0.42
SMC2-204ENST00000440179 ARMC5Q96C12 935 aa17.68■□□□□ 0.42
SMC2-204ENST00000440179 ZBED3Q96IU2 234 aaPredicted RBP17.68■□□□□ 0.42
SMC2-204ENST00000440179 SSC5DA1L4H1 1573 aa17.67■□□□□ 0.42
SMC2-204ENST00000440179 LAMB1P07942 1786 aa17.67■□□□□ 0.42
SMC2-204ENST00000440179 PDE8AO60658 829 aa17.67■□□□□ 0.42
SMC2-204ENST00000440179 HSP90B1P14625 803 aaKnown RBP17.67■□□□□ 0.42
SMC2-204ENST00000440179 CAP1Q01518 475 aa17.67■□□□□ 0.42
SMC2-204ENST00000440179 STRIP1Q5VSL9 837 aa17.67■□□□□ 0.42
SMC2-204ENST00000440179 ANGEL1Q9UNK9 670 aaKnown RBP17.67■□□□□ 0.42
SMC2-204ENST00000440179 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
SMC2-204ENST00000440179 PTPN22Q9Y2R2 807 aa17.67■□□□□ 0.42
SMC2-204ENST00000440179 LAS1LQ9Y4W2 734 aaKnown RBP17.67■□□□□ 0.42
SMC2-204ENST00000440179 MANSC4A6NHS7 340 aaPredicted RBP17.66■□□□□ 0.42
SMC2-204ENST00000440179 NEUROD2Q15784 382 aa17.66■□□□□ 0.42
SMC2-204ENST00000440179 TXNRD3Q86VQ6 643 aa17.66■□□□□ 0.42
SMC2-204ENST00000440179 APOBEC3FQ8IUX4 373 aaKnown RBP17.66■□□□□ 0.42
SMC2-204ENST00000440179 CLMNQ96JQ2 1002 aa17.66■□□□□ 0.42
SMC2-204ENST00000440179 MYO3BQ8WXR4 1341 aa17.66■□□□□ 0.42
SMC2-204ENST00000440179 INHBEP58166 350 aa17.65■□□□□ 0.42
SMC2-204ENST00000440179 DUSP27Q5VZP5 1158 aa17.65■□□□□ 0.42
SMC2-204ENST00000440179 RIC3Q7Z5B4 369 aa17.65■□□□□ 0.42
SMC2-204ENST00000440179 CCDC191Q8NCU4 936 aa17.65■□□□□ 0.42
SMC2-204ENST00000440179 SPDYE1Q8NFV5 336 aaPredicted RBP17.65■□□□□ 0.42
SMC2-204ENST00000440179 WNK4Q96J92 1243 aa17.65■□□□□ 0.42
SMC2-204ENST00000440179 MYD88Q99836 296 aa17.65■□□□□ 0.42
SMC2-204ENST00000440179 PHAXQ9H814 394 aaKnown RBP17.65■□□□□ 0.42
SMC2-204ENST00000440179 MINPP1Q9UNW1 487 aa17.65■□□□□ 0.42
SMC2-204ENST00000440179 ZBTB48P10074 688 aaPredicted RBP17.64■□□□□ 0.41
SMC2-204ENST00000440179 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
SMC2-204ENST00000440179 MAP3K11Q16584 847 aa17.64■□□□□ 0.41
SMC2-204ENST00000440179 CD99L2Q8TCZ2 262 aa17.64■□□□□ 0.41
SMC2-204ENST00000440179 FBXW7Q969H0 707 aa17.64■□□□□ 0.41
SMC2-204ENST00000440179 SLC10A4Q96EP9 437 aa17.64■□□□□ 0.41
SMC2-204ENST00000440179 ERO1AQ96HE7 468 aa17.64■□□□□ 0.41
SMC2-204ENST00000440179 COLQQ9Y215 455 aaPredicted RBP17.64■□□□□ 0.41
SMC2-204ENST00000440179 COL1A1P02452 1464 aaPredicted RBP17.63■□□□□ 0.41
SMC2-204ENST00000440179 MMP14P50281 582 aa17.63■□□□□ 0.41
SMC2-204ENST00000440179 CCT4P50991 539 aaKnown RBP17.63■□□□□ 0.41
SMC2-204ENST00000440179 CRHR2Q13324 411 aa17.63■□□□□ 0.41
SMC2-204ENST00000440179 KIAA0825Q8IV33 1275 aa17.63■□□□□ 0.41
SMC2-204ENST00000440179 CCDC146Q8IYE0 955 aa17.63■□□□□ 0.41
SMC2-204ENST00000440179 COA1Q9GZY4 146 aa17.63■□□□□ 0.41
SMC2-204ENST00000440179 DEFB129Q9H1M3 183 aa17.63■□□□□ 0.41
SMC2-204ENST00000440179 BSDC1Q9NW68 430 aaPredicted RBP17.63■□□□□ 0.41
SMC2-204ENST00000440179 CWC25Q9NXE8 425 aaPredicted RBP17.63■□□□□ 0.41
SMC2-204ENST00000440179 COL6A3P12111 3177 aa17.63■□□□□ 0.41
SMC2-204ENST00000440179 CUL9Q8IWT3 2517 aa17.63■□□□□ 0.41
SMC2-204ENST00000440179 KLRK1P26718 216 aa17.62■□□□□ 0.41
SMC2-204ENST00000440179 GJA5P36382 358 aa17.62■□□□□ 0.41
SMC2-204ENST00000440179 CTSWP56202 376 aa17.62■□□□□ 0.41
SMC2-204ENST00000440179 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms