RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 SRCIN1Q9C0H9 1055 aa25.76■■□□□ 1.71
NCKIPSD-206ENST00000439518 CHRNDQ07001 517 aa25.75■■□□□ 1.71
NCKIPSD-206ENST00000439518 SLC4A10Q6U841 1118 aa25.75■■□□□ 1.71
NCKIPSD-206ENST00000439518 LMBR1LQ6UX01 489 aa25.75■■□□□ 1.71
NCKIPSD-206ENST00000439518 MRPL50Q8N5N7 158 aaKnown RBP25.75■■□□□ 1.71
NCKIPSD-206ENST00000439518 DCPSQ96C86 337 aaKnown RBP25.75■■□□□ 1.71
NCKIPSD-206ENST00000439518 ZNF408Q9H9D4 720 aa25.75■■□□□ 1.71
NCKIPSD-206ENST00000439518 USP17L8P0C7I0 530 aa25.74■■□□□ 1.71
NCKIPSD-206ENST00000439518 KLRK1P26718 216 aa25.74■■□□□ 1.71
NCKIPSD-206ENST00000439518 DACT2Q5SW24 774 aa25.74■■□□□ 1.71
NCKIPSD-206ENST00000439518 PAXIP1Q6ZW49 1069 aaPredicted RBP25.74■■□□□ 1.71
NCKIPSD-206ENST00000439518 AIDAQ96BJ3 306 aa25.74■■□□□ 1.71
NCKIPSD-206ENST00000439518 C9orf78Q9NZ63 289 aaPredicted RBP25.74■■□□□ 1.71
NCKIPSD-206ENST00000439518 THSD7BQ9C0I4 1608 aa25.74■■□□□ 1.71
NCKIPSD-206ENST00000439518 POLR2AP24928 1970 aaKnown RBP25.73■■□□□ 1.71
NCKIPSD-206ENST00000439518 ASTN2O75129 1339 aaPredicted RBP25.73■■□□□ 1.71
NCKIPSD-206ENST00000439518 MAP2K1Q02750 393 aaPredicted RBP25.73■■□□□ 1.71
NCKIPSD-206ENST00000439518 GGA3Q9NZ52 723 aa25.73■■□□□ 1.71
NCKIPSD-206ENST00000439518 ADM5C9JUS6 153 aa25.72■■□□□ 1.71
NCKIPSD-206ENST00000439518 CTCFP49711 727 aaPredicted RBP25.72■■□□□ 1.71
NCKIPSD-206ENST00000439518 STRIP1Q5VSL9 837 aa25.72■■□□□ 1.71
NCKIPSD-206ENST00000439518 TNS4Q8IZW8 715 aa25.72■■□□□ 1.71
NCKIPSD-206ENST00000439518 CHMP3Q9Y3E7 222 aa25.72■■□□□ 1.71
NCKIPSD-206ENST00000439518 IRS2Q9Y4H2 1338 aa25.71■■□□□ 1.71
NCKIPSD-206ENST00000439518 MYOZ2Q9NPC6 264 aa25.71■■□□□ 1.71
NCKIPSD-206ENST00000439518 ZNF646O15015 1829 aaPredicted RBP25.7■■□□□ 1.71
NCKIPSD-206ENST00000439518 UTYO14607 1347 aa25.7■■□□□ 1.71
NCKIPSD-206ENST00000439518 GRM1Q13255 1194 aa25.7■■□□□ 1.7
NCKIPSD-206ENST00000439518 SCARF1Q14162 830 aa25.7■■□□□ 1.7
NCKIPSD-206ENST00000439518 CCDC57Q2TAC2 916 aa25.7■■□□□ 1.7
NCKIPSD-206ENST00000439518 C15orf52Q6ZUT6 534 aaKnown RBP25.7■■□□□ 1.7
NCKIPSD-206ENST00000439518 HELBQ8NG08 1087 aaPredicted RBP25.7■■□□□ 1.7
NCKIPSD-206ENST00000439518 SSH1Q8WYL5 1049 aa25.7■■□□□ 1.7
NCKIPSD-206ENST00000439518 KAZALD1Q96I82 304 aa25.7■■□□□ 1.7
NCKIPSD-206ENST00000439518 MXD3Q9BW11 206 aa25.7■■□□□ 1.7
NCKIPSD-206ENST00000439518 PRDM10Q9NQV6 1147 aa25.7■■□□□ 1.7
NCKIPSD-206ENST00000439518 CCER2I3L3R5 266 aa25.69■■□□□ 1.7
NCKIPSD-206ENST00000439518 SNAP23O00161 211 aa25.69■■□□□ 1.7
NCKIPSD-206ENST00000439518 TAF5LO75529 589 aa25.69■■□□□ 1.7
NCKIPSD-206ENST00000439518 MAP2K2P36507 400 aa25.69■■□□□ 1.7
NCKIPSD-206ENST00000439518 KCNJ4P48050 445 aa25.69■■□□□ 1.7
NCKIPSD-206ENST00000439518 SULF1Q8IWU6 871 aa25.69■■□□□ 1.7
NCKIPSD-206ENST00000439518 CDCA7LQ96GN5 454 aa25.69■■□□□ 1.7
NCKIPSD-206ENST00000439518 PTPRCP08575 1304 aa25.68■■□□□ 1.7
NCKIPSD-206ENST00000439518 MYO3BQ8WXR4 1341 aa25.68■■□□□ 1.7
NCKIPSD-206ENST00000439518 NBPF7P0C2Y1 421 aaPredicted RBP25.68■■□□□ 1.7
NCKIPSD-206ENST00000439518 ANGEL2Q5VTE6 544 aaKnown RBP25.68■■□□□ 1.7
NCKIPSD-206ENST00000439518 TRMT2AQ8IZ69 625 aaKnown RBP25.68■■□□□ 1.7
NCKIPSD-206ENST00000439518 SUCLG2Q96I99 432 aa25.68■■□□□ 1.7
NCKIPSD-206ENST00000439518 ZNF594Q96JF6 807 aaPredicted RBP25.68■■□□□ 1.7
NCKIPSD-206ENST00000439518 AOC2O75106 756 aa25.67■■□□□ 1.7
NCKIPSD-206ENST00000439518 TTLL5Q6EMB2 1281 aa25.67■■□□□ 1.7
NCKIPSD-206ENST00000439518 LDHAL6AQ6ZMR3 332 aa25.67■■□□□ 1.7
NCKIPSD-206ENST00000439518 HUNKP57058 714 aa25.66■■□□□ 1.7
NCKIPSD-206ENST00000439518 FBXW7Q969H0 707 aa25.66■■□□□ 1.7
NCKIPSD-206ENST00000439518 GBA2Q9HCG7 927 aaPredicted RBP25.66■■□□□ 1.7
NCKIPSD-206ENST00000439518 CD209Q9NNX6 404 aa25.66■■□□□ 1.7
NCKIPSD-206ENST00000439518 PITPNM2Q9BZ72 1349 aa25.65■■□□□ 1.7
NCKIPSD-206ENST00000439518 HSPA8P11142 646 aaKnown RBP25.65■■□□□ 1.7
NCKIPSD-206ENST00000439518 LBX1P52954 281 aa25.65■■□□□ 1.7
NCKIPSD-206ENST00000439518 TAF7LQ5H9L4 462 aa25.65■■□□□ 1.7
NCKIPSD-206ENST00000439518 OGFOD1Q8N543 542 aa25.65■■□□□ 1.7
NCKIPSD-206ENST00000439518 A0A1B0GUL6 1792 aa25.64■■□□□ 1.7
NCKIPSD-206ENST00000439518 MMP14P50281 582 aa25.64■■□□□ 1.7
NCKIPSD-206ENST00000439518 GTF2IP78347 998 aa25.64■■□□□ 1.7
NCKIPSD-206ENST00000439518 ALDH1L2Q3SY69 923 aa25.64■■□□□ 1.7
NCKIPSD-206ENST00000439518 C2orf69Q8N8R5 385 aa25.64■■□□□ 1.7
NCKIPSD-206ENST00000439518 CDCA5Q96FF9 252 aa25.64■■□□□ 1.7
NCKIPSD-206ENST00000439518 NBPF9Q3BBW0 867 aa25.63■■□□□ 1.69
NCKIPSD-206ENST00000439518 CNNM1Q9NRU3 951 aa25.63■■□□□ 1.69
NCKIPSD-206ENST00000439518 RABL6Q3YEC7 729 aaPredicted RBP25.62■■□□□ 1.69
NCKIPSD-206ENST00000439518 BICC1Q9H694 974 aaKnown RBP25.62■■□□□ 1.69
NCKIPSD-206ENST00000439518 WNT10BO00744 389 aa25.61■■□□□ 1.69
NCKIPSD-206ENST00000439518 IL1R1P14778 569 aa25.61■■□□□ 1.69
NCKIPSD-206ENST00000439518 BEGAINQ9BUH8 593 aa25.61■■□□□ 1.69
NCKIPSD-206ENST00000439518 PLIN1O60240 522 aa25.6■■□□□ 1.69
NCKIPSD-206ENST00000439518 BRPF1P55201 1214 aaPredicted RBP25.6■■□□□ 1.69
NCKIPSD-206ENST00000439518 NOGQ13253 232 aa25.6■■□□□ 1.69
NCKIPSD-206ENST00000439518 RGMBQ6NW40 437 aa25.6■■□□□ 1.69
NCKIPSD-206ENST00000439518 ZNF804AQ7Z570 1209 aa25.6■■□□□ 1.69
NCKIPSD-206ENST00000439518 KIAA0825Q8IV33 1275 aa25.6■■□□□ 1.69
NCKIPSD-206ENST00000439518 ANKRD44Q8N8A2 993 aa25.6■■□□□ 1.69
NCKIPSD-206ENST00000439518 PUS3Q9BZE2 481 aaKnown RBP25.6■■□□□ 1.69
NCKIPSD-206ENST00000439518 USP44Q9H0E7 712 aa25.6■■□□□ 1.69
NCKIPSD-206ENST00000439518 CERS5Q8N5B7 392 aa25.59■■□□□ 1.69
NCKIPSD-206ENST00000439518 RIPOR2Q9Y4F9 1068 aa25.59■■□□□ 1.69
NCKIPSD-206ENST00000439518 FAM155AB1AL88 458 aaPredicted RBP25.58■■□□□ 1.69
NCKIPSD-206ENST00000439518 CT47B1P0C2W7 299 aaPredicted RBP25.58■■□□□ 1.69
NCKIPSD-206ENST00000439518 ZBED3Q96IU2 234 aaPredicted RBP25.58■■□□□ 1.69
NCKIPSD-206ENST00000439518 ZIC5Q96T25 663 aa25.58■■□□□ 1.69
NCKIPSD-206ENST00000439518 SMC4Q9NTJ3 1288 aa25.58■■□□□ 1.69
NCKIPSD-206ENST00000439518 HDAC9Q9UKV0 1011 aa25.58■■□□□ 1.69
NCKIPSD-206ENST00000439518 UBE4AQ14139 1066 aa25.57■■□□□ 1.68
NCKIPSD-206ENST00000439518 SCAF8Q9UPN6 1271 aaKnown RBP25.57■■□□□ 1.68
NCKIPSD-206ENST00000439518 SASH1O94885 1247 aa25.56■■□□□ 1.68
NCKIPSD-206ENST00000439518 CCDC102AQ96A19 550 aa25.56■■□□□ 1.68
NCKIPSD-206ENST00000439518 CA12O43570 354 aa25.55■■□□□ 1.68
NCKIPSD-206ENST00000439518 ZNF157P51786 506 aaPredicted RBP25.55■■□□□ 1.68
NCKIPSD-206ENST00000439518 FKBP1AP62942 108 aaKnown RBP25.55■■□□□ 1.68
NCKIPSD-206ENST00000439518 FKBP1BP68106 108 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms