RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 AFF2P51816 1311 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 ZBED4O75132 1171 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 BRF1Q92994 677 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 MAST1Q9Y2H9 1570 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 DPH6Q7L8W6 267 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.89□□□□□ -0.19
NEK1-201ENST00000439128 SYNCQ9H7C4 482 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 EIF2AK4Q9P2K8 1649 aaKnown RBP13.89□□□□□ -0.19
NEK1-201ENST00000439128 SHANK2Q9UPX8 1470 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 NOP56O00567 594 aaKnown RBP13.89□□□□□ -0.19
NEK1-201ENST00000439128 EPB41L2O43491 1005 aaKnown RBP13.89□□□□□ -0.19
NEK1-201ENST00000439128 MTIF2P46199 727 aaKnown RBP13.89□□□□□ -0.19
NEK1-201ENST00000439128 GADL1Q6ZQY3 521 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 CPXCR1Q8N123 301 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 ARHGAP45Q92619 1136 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 AATFQ9NY61 560 aaKnown RBP eCLIP13.89□□□□□ -0.19
NEK1-201ENST00000439128 RTL9Q8NET4 1388 aa13.89□□□□□ -0.19
NEK1-201ENST00000439128 OTUD7BQ6GQQ9 843 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 PODXL2Q9NZ53 605 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 GINS2Q9Y248 185 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 KIAA0232Q92628 1395 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 PLEKHH1Q9ULM0 1364 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 UGGT1Q9NYU2 1555 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 TNNT1P13805 278 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 PRKCSHP14314 528 aaPredicted RBP13.88□□□□□ -0.19
NEK1-201ENST00000439128 SETQ01105 290 aaPredicted RBP13.88□□□□□ -0.19
NEK1-201ENST00000439128 TSPYL6Q8N831 410 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 LOC102724428A0A0B4J2F2 783 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 LPXNO60711 386 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 SIK1P57059 783 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 SPOUT1Q5T280 376 aaKnown RBP13.88□□□□□ -0.19
NEK1-201ENST00000439128 ERCC4Q92889 916 aaPredicted RBP13.88□□□□□ -0.19
NEK1-201ENST00000439128 HOMER2Q9NSB8 354 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 TCP10L2B9ZVM9 353 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 CTNNA2P26232 953 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 SPA17Q15506 151 aa13.88□□□□□ -0.19
NEK1-201ENST00000439128 CTNNBL1Q8WYA6 563 aaPredicted RBP13.88□□□□□ -0.19
NEK1-201ENST00000439128 ZNF496Q96IT1 587 aaPredicted RBP13.88□□□□□ -0.19
NEK1-201ENST00000439128 TTF2Q9UNY4 1162 aaKnown RBP13.88□□□□□ -0.19
NEK1-201ENST00000439128 EYA2O00167 538 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 MYCLP12524 364 aaPredicted RBP13.87□□□□□ -0.19
NEK1-201ENST00000439128 FCHSD1Q86WN1 690 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 CERKQ8TCT0 537 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 ALG1Q9BT22 464 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 KCNQ4P56696 695 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 NMIQ13287 307 aaPredicted RBP13.87□□□□□ -0.19
NEK1-201ENST00000439128 ARHGEF6Q15052 776 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 RSPH6AQ9H0K4 717 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 SPC25Q9HBM1 224 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 SLC5A4Q9NY91 659 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 COMMD10Q9Y6G5 202 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 GJB2P29033 226 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 RPS8P62241 208 aaKnown RBP13.87□□□□□ -0.19
NEK1-201ENST00000439128 TDRD12Q587J7 1177 aaKnown RBP13.87□□□□□ -0.19
NEK1-201ENST00000439128 PSMD1Q99460 953 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.87□□□□□ -0.19
NEK1-201ENST00000439128 EXOC1Q9NV70 894 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 A0A1B0GUL7 405 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 TTC22Q5TAA0 569 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 AS3MTQ9HBK9 375 aa13.87□□□□□ -0.19
NEK1-201ENST00000439128 USP37Q86T82 979 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 ZKSCAN3Q9BRR0 538 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 MAP3K11Q16584 847 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 ARMT1Q9H993 441 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 GOPCQ9HD26 462 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 TIMM10P62072 90 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 SCAND2PQ9GZW5 306 aaPredicted RBP13.86□□□□□ -0.19
NEK1-201ENST00000439128 USP40Q9NVE5 1235 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 PHKG2P15735 406 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 ZRSR2Q15696 482 aaKnown RBP13.86□□□□□ -0.19
NEK1-201ENST00000439128 AKNAD1Q5T1N1 836 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 FNBP4Q8N3X1 1017 aaPredicted RBP13.86□□□□□ -0.19
NEK1-201ENST00000439128 TCEANC2Q96MN5 208 aa13.86□□□□□ -0.19
NEK1-201ENST00000439128 DALRD3Q5D0E6 543 aaKnown RBP13.85□□□□□ -0.19
NEK1-201ENST00000439128 TBC1D22AQ8WUA7 517 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 XAGE2Q96GT9 111 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 RBM8AQ9Y5S9 174 aaKnown RBP13.85□□□□□ -0.19
NEK1-201ENST00000439128 GBP2P32456 591 aaPredicted RBP13.85□□□□□ -0.19
NEK1-201ENST00000439128 KIAA0825Q8IV33 1275 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 MAPKAPK5Q8IW41 473 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 FSIP1Q8NA03 581 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 TEKT1Q969V4 418 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 KRT13P13646 458 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 CRKLP46109 303 aaKnown RBP13.85□□□□□ -0.19
NEK1-201ENST00000439128 FAM47CQ5HY64 1035 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 NSMFQ6X4W1 530 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 CHST3Q7LGC8 479 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 PYM1Q9BRP8 204 aaKnown RBP13.85□□□□□ -0.19
NEK1-201ENST00000439128 MFSD14BQ5SR56 506 aa13.85□□□□□ -0.19
NEK1-201ENST00000439128 IL13P35225 146 aa13.84□□□□□ -0.19
NEK1-201ENST00000439128 APBB1IPQ7Z5R6 666 aaPredicted RBP13.84□□□□□ -0.19
NEK1-201ENST00000439128 FILIP1Q7Z7B0 1213 aa13.84□□□□□ -0.19
NEK1-201ENST00000439128 PPEF1O14829 653 aaPredicted RBP13.84□□□□□ -0.19
NEK1-201ENST00000439128 STAT6P42226 847 aa13.84□□□□□ -0.19
NEK1-201ENST00000439128 SCNN1DP51172 638 aa13.84□□□□□ -0.19
NEK1-201ENST00000439128 TEX35Q5T0J7 233 aa13.84□□□□□ -0.19
NEK1-201ENST00000439128 DCAF15Q66K64 600 aa13.84□□□□□ -0.19
NEK1-201ENST00000439128 IMPG2Q9BZV3 1241 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms