RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 PI4KAP2A4QPH2 592 aa11.77□□□□□ -0.53
AC011228.1-201ENST00000439027 NEXNQ0ZGT2 675 aa11.77□□□□□ -0.53
AC011228.1-201ENST00000439027 KSR2Q6VAB6 950 aa11.77□□□□□ -0.53
AC011228.1-201ENST00000439027 ANKRD18AQ8IVF6 992 aa11.77□□□□□ -0.53
AC011228.1-201ENST00000439027 PI4KAP1Q8N8J0 262 aa11.77□□□□□ -0.53
AC011228.1-201ENST00000439027 DUOX1Q9NRD9 1551 aa11.76□□□□□ -0.53
AC011228.1-201ENST00000439027 RPS12P25398 132 aaKnown RBP11.76□□□□□ -0.53
AC011228.1-201ENST00000439027 DLK2Q6UY11 383 aa11.76□□□□□ -0.53
AC011228.1-201ENST00000439027 KRT26Q7Z3Y9 468 aa11.76□□□□□ -0.53
AC011228.1-201ENST00000439027 SAPCD2Q86UD0 394 aa11.76□□□□□ -0.53
AC011228.1-201ENST00000439027 PODXL2Q9NZ53 605 aa11.76□□□□□ -0.53
AC011228.1-201ENST00000439027 EGFRP00533 1210 aa11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 TIE1P35590 1138 aa11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 MAP2K2P36507 400 aa11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 TWISTNBQ3B726 338 aaPredicted RBP11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 LHX8Q68G74 356 aa11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 WWC1Q8IX03 1113 aa11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 DCPSQ96C86 337 aaKnown RBP11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 CDC5LQ99459 802 aaKnown RBP11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 TSKSQ9UJT2 592 aa11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 RTL9Q8NET4 1388 aa11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 COL4A1P02462 1669 aa11.75□□□□□ -0.53
AC011228.1-201ENST00000439027 LRRC37AA6NMS7 1700 aa11.74□□□□□ -0.53
AC011228.1-201ENST00000439027 IGKV5-2P06315 115 aa11.74□□□□□ -0.53
AC011228.1-201ENST00000439027 VIL1P09327 827 aaKnown RBP11.74□□□□□ -0.53
AC011228.1-201ENST00000439027 ATP2B4P23634 1241 aa11.74□□□□□ -0.53
AC011228.1-201ENST00000439027 CTSWP56202 376 aa11.74□□□□□ -0.53
AC011228.1-201ENST00000439027 HUNKP57058 714 aa11.74□□□□□ -0.53
AC011228.1-201ENST00000439027 G2E3Q7L622 706 aa11.74□□□□□ -0.53
AC011228.1-201ENST00000439027 XDHP47989 1333 aa11.74□□□□□ -0.53
AC011228.1-201ENST00000439027 ZBED9Q6R2W3 1325 aa11.74□□□□□ -0.53
AC011228.1-201ENST00000439027 ADM5C9JUS6 153 aa11.73□□□□□ -0.53
AC011228.1-201ENST00000439027 CCDC27Q2M243 656 aa11.73□□□□□ -0.53
AC011228.1-201ENST00000439027 CWF19L2Q2TBE0 894 aaKnown RBP11.73□□□□□ -0.53
AC011228.1-201ENST00000439027 KIF4BQ2VIQ3 1234 aa11.73□□□□□ -0.53
AC011228.1-201ENST00000439027 POLR2AP24928 1970 aaKnown RBP11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 NEURL1BA8MQ27 555 aa11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 ATN1P54259 1190 aaPredicted RBP11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 RSBN1LQ6PCB5 846 aaPredicted RBP11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 UBE3BQ7Z3V4 1068 aa11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 SULF1Q8IWU6 871 aa11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 C2orf69Q8N8R5 385 aa11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 TTLL11Q8NHH1 800 aa11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 HHIPL1Q96JK4 782 aa11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 GREM2Q9H772 168 aa11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 GBA2Q9HCG7 927 aaPredicted RBP11.72□□□□□ -0.53
AC011228.1-201ENST00000439027 ASTN2O75129 1339 aaPredicted RBP11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 IL16Q14005 1332 aa11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 USP17L3A6NCW0 530 aa11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 USP17L4A6NCW7 530 aa11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 WTIPA6NIX2 430 aaPredicted RBP11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 IGHMBP2P38935 993 aaKnown RBP11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 FKBP5Q13451 457 aaPredicted RBP11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 SCARF1Q14162 830 aa11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 USP17L1Q7RTZ2 530 aa11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 AGBL3Q8NEM8 1001 aa11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 ABHD8Q96I13 439 aa11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 BSDC1Q9NW68 430 aaPredicted RBP11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 GGA3Q9NZ52 723 aa11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 CIZ1Q9ULV3 898 aaPredicted RBP11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 MINPP1Q9UNW1 487 aa11.71□□□□□ -0.53
AC011228.1-201ENST00000439027 H7C1W4 665 aa11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 CA12O43570 354 aa11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 USP17L8P0C7I0 530 aa11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 ZNF280AP59817 542 aaPredicted RBP11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 FLIIQ13045 1269 aa11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 NOGQ13253 232 aa11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 RGMBQ6NW40 437 aa11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 PODNQ7Z5L7 613 aa11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 ZIC5Q96T25 663 aa11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 SCN9AQ15858 1988 aa11.7□□□□□ -0.54
AC011228.1-201ENST00000439027 FANCIQ9NVI1 1328 aa11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 TTLL13PA6NNM8 815 aa11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 CENPBP07199 599 aaPredicted RBP11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 CCT4P50991 539 aaKnown RBP11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 ZNF157P51786 506 aaPredicted RBP11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 GCKRQ14397 625 aa11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 ANGEL2Q5VTE6 544 aaKnown RBP11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 DNAAF4Q8WXU2 420 aa11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 SLC39A7Q92504 469 aa11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 CDCA5Q96FF9 252 aa11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 MPHOSPH8Q99549 860 aa11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 MYH16Q9H6N6 1097 aa11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
AC011228.1-201ENST00000439027 CCDC85CA6NKD9 419 aa11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 CHRM1P11229 460 aaPredicted RBP11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 ITGA6P23229 1130 aa11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 KCNJ4P48050 445 aa11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 EXOSC9Q06265 439 aaKnown RBP11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 WDR63Q8IWG1 891 aa11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 CCDC102AQ96A19 550 aa11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 GMLQ99445 158 aa11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 MXD3Q9BW11 206 aa11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 ANKRD2Q9GZV1 360 aa11.68□□□□□ -0.54
AC011228.1-201ENST00000439027 LEMD3Q9Y2U8 911 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms