RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PPME1Q9Y570 386 aa6.4□□□□□ -1.38
HMGB3P12-201ENST00000438745 BRD1O95696 1058 aa6.39□□□□□ -1.39
HMGB3P12-201ENST00000438745 NKAPLQ5M9Q1 402 aa6.39□□□□□ -1.39
HMGB3P12-201ENST00000438745 TMEM130Q8N3G9 435 aa6.39□□□□□ -1.39
HMGB3P12-201ENST00000438745 CCER1Q8TC90 406 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P12-201ENST00000438745 SSBP4Q9BWG4 385 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P12-201ENST00000438745 ZFYVE28Q9HCC9 887 aa6.39□□□□□ -1.39
HMGB3P12-201ENST00000438745 KANSL3Q9P2N6 904 aa6.39□□□□□ -1.39
HMGB3P12-201ENST00000438745 H3BRB1 525 aa6.38□□□□□ -1.39
HMGB3P12-201ENST00000438745 EREGO14944 169 aa6.38□□□□□ -1.39
HMGB3P12-201ENST00000438745 IGHA2P01877 340 aa6.38□□□□□ -1.39
HMGB3P12-201ENST00000438745 TXNRD3Q86VQ6 643 aa6.38□□□□□ -1.39
HMGB3P12-201ENST00000438745 GLYCTKQ8IVS8 523 aa6.38□□□□□ -1.39
HMGB3P12-201ENST00000438745 SNX29Q8TEQ0 813 aa6.38□□□□□ -1.39
HMGB3P12-201ENST00000438745 CITED4Q96RK1 184 aa6.38□□□□□ -1.39
HMGB3P12-201ENST00000438745 TUT1Q9H6E5 874 aaKnown RBP6.38□□□□□ -1.39
HMGB3P12-201ENST00000438745 TPSG1Q9NRR2 321 aa6.38□□□□□ -1.39
HMGB3P12-201ENST00000438745 FOXD3Q9UJU5 478 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P12-201ENST00000438745 ACPPP15309 386 aa6.37□□□□□ -1.39
HMGB3P12-201ENST00000438745 CDC27P30260 824 aa6.37□□□□□ -1.39
HMGB3P12-201ENST00000438745 RSPO4Q2I0M5 234 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P12-201ENST00000438745 TMEM102Q8N9M5 508 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P12-201ENST00000438745 GALNT11Q8NCW6 608 aa6.37□□□□□ -1.39
HMGB3P12-201ENST00000438745 NXPE3Q969Y0 559 aa6.37□□□□□ -1.39
HMGB3P12-201ENST00000438745 FAM129BQ96TA1 746 aa6.37□□□□□ -1.39
HMGB3P12-201ENST00000438745 SEMA6BQ9H3T3 888 aa6.37□□□□□ -1.39
HMGB3P12-201ENST00000438745 BRPF3Q9ULD4 1205 aa6.37□□□□□ -1.39
HMGB3P12-201ENST00000438745 PHACTR2O75167 634 aa6.36□□□□□ -1.39
HMGB3P12-201ENST00000438745 PEAR1Q5VY43 1037 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P12-201ENST00000438745 DCAF11Q8TEB1 546 aa6.36□□□□□ -1.39
HMGB3P12-201ENST00000438745 WFDC12Q8WWY7 111 aa6.36□□□□□ -1.39
HMGB3P12-201ENST00000438745 LACRTQ9GZZ8 138 aa6.36□□□□□ -1.39
HMGB3P12-201ENST00000438745 SH2B1Q9NRF2 756 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P12-201ENST00000438745 SOWAHDA6NJG2 315 aa6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 LINC01387J3KSC0 135 aa6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 PDE2AO00408 941 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 TRPA1O75762 1119 aa6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 EDN3P14138 238 aa6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 PTPRAP18433 802 aa6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 EPHA1P21709 976 aa6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 HHIPQ96QV1 700 aa6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 MRPL18Q9H0U6 180 aaKnown RBP6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 USP21Q9UK80 565 aa6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 SOX13Q9UN79 622 aa6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 AMOTL2Q9Y2J4 779 aa6.35□□□□□ -1.39
HMGB3P12-201ENST00000438745 NOS3P29474 1203 aa6.34□□□□□ -1.39
HMGB3P12-201ENST00000438745 PDE3BQ13370 1112 aa6.34□□□□□ -1.39
HMGB3P12-201ENST00000438745 GALNT12Q8IXK2 581 aa6.34□□□□□ -1.39
HMGB3P12-201ENST00000438745 KLHL23Q8NBE8 558 aa6.34□□□□□ -1.39
HMGB3P12-201ENST00000438745 WNT8BQ93098 351 aa6.34□□□□□ -1.39
HMGB3P12-201ENST00000438745 OSMRQ99650 979 aa6.34□□□□□ -1.39
HMGB3P12-201ENST00000438745 ZKSCAN3Q9BRR0 538 aa6.34□□□□□ -1.39
HMGB3P12-201ENST00000438745 RBCK1Q9BYM8 510 aa6.34□□□□□ -1.39
HMGB3P12-201ENST00000438745 F8W735 103 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P12-201ENST00000438745 FSCN2O14926 492 aa6.33□□□□□ -1.4
HMGB3P12-201ENST00000438745 NDUFB5O43674 189 aa6.33□□□□□ -1.4
HMGB3P12-201ENST00000438745 H2AFB1P0C5Y9 115 aa6.33□□□□□ -1.4
HMGB3P12-201ENST00000438745 H2AFB2P0C5Z0 115 aa6.33□□□□□ -1.4
HMGB3P12-201ENST00000438745 IREB2P48200 963 aaKnown RBP6.33□□□□□ -1.4
HMGB3P12-201ENST00000438745 Q6ZS46 218 aa6.33□□□□□ -1.4
HMGB3P12-201ENST00000438745 DZIP1LQ8IYY4 767 aaKnown RBP6.33□□□□□ -1.4
HMGB3P12-201ENST00000438745 BHLHE41Q9C0J9 482 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P12-201ENST00000438745 OSGEPQ9NPF4 335 aa6.33□□□□□ -1.4
HMGB3P12-201ENST00000438745 H3BRJ5 948 aa6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 NEFLP07196 543 aa6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 CD68P34810 354 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 FOXD4L6Q3SYB3 417 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 TXNDC11Q6PKC3 985 aa6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 FOXD4L3Q6VB84 417 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 VN1R5Q7Z5H4 357 aa6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 BSNDQ8WZ55 320 aa6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 ALKBH8Q96BT7 664 aaKnown RBP6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 TRAIPQ9BWF2 469 aa6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 AKTIPQ9H8T0 292 aa6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 KCNK4Q9NYG8 393 aa6.32□□□□□ -1.4
HMGB3P12-201ENST00000438745 DYRK3O43781 588 aa6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 PIP4K2BP78356 416 aa6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 KIAA0319Q5VV43 1072 aa6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 FAM117BQ6P1L5 589 aa6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 KLHDC7BQ96G42 594 aa6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 MEGF10Q96KG7 1140 aa6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 DNAJC25Q9H1X3 360 aa6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 SEC31BQ9NQW1 1179 aa6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 LATS2Q9NRM7 1088 aa6.31□□□□□ -1.4
HMGB3P12-201ENST00000438745 A0A1W2PP55 124 aa6.3□□□□□ -1.4
HMGB3P12-201ENST00000438745 SOX1O00570 391 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P12-201ENST00000438745 GPR182O15218 404 aa6.3□□□□□ -1.4
HMGB3P12-201ENST00000438745 ALX3O95076 343 aa6.3□□□□□ -1.4
HMGB3P12-201ENST00000438745 POLR3DP05423 398 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P12-201ENST00000438745 CCNJLQ8IV13 435 aa6.3□□□□□ -1.4
HMGB3P12-201ENST00000438745 DMRTB1Q96MA1 342 aa6.3□□□□□ -1.4
HMGB3P12-201ENST00000438745 TCF12Q99081 682 aa6.3□□□□□ -1.4
HMGB3P12-201ENST00000438745 ADAM11O75078 769 aa6.29□□□□□ -1.4
HMGB3P12-201ENST00000438745 WISP1O95388 367 aa6.29□□□□□ -1.4
HMGB3P12-201ENST00000438745 CABP4P57796 275 aa6.29□□□□□ -1.4
HMGB3P12-201ENST00000438745 ORC1Q13415 861 aa6.29□□□□□ -1.4
HMGB3P12-201ENST00000438745 USPL1Q5W0Q7 1092 aa6.29□□□□□ -1.4
HMGB3P12-201ENST00000438745 FOXD4L4Q8WXT5 416 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms