RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PEAR1Q5VY43 1037 aaPredicted RBP6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 CEP135Q66GS9 1140 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 C1orf229Q6ZS94 237 aaPredicted RBP6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 CHSY3Q70JA7 882 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 SVOPQ8N4V2 548 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 NXPE3Q969Y0 559 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 ZKSCAN3Q9BRR0 538 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 BCO2Q9BYV7 579 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 MUC3BQ9H195 1237 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 PRDM6Q9NQX0 595 aa6.39□□□□□ -1.39
LSM1P1-201ENST00000438629 PTPRAP18433 802 aa6.38□□□□□ -1.39
LSM1P1-201ENST00000438629 EIF4BP23588 611 aaKnown RBP6.38□□□□□ -1.39
LSM1P1-201ENST00000438629 C20orf204Q6ZNR8 217 aa6.38□□□□□ -1.39
LSM1P1-201ENST00000438629 CCNJLQ8IV13 435 aa6.38□□□□□ -1.39
LSM1P1-201ENST00000438629 LPIN3Q9BQK8 851 aa6.38□□□□□ -1.39
LSM1P1-201ENST00000438629 BHLHE41Q9C0J9 482 aaPredicted RBP6.38□□□□□ -1.39
LSM1P1-201ENST00000438629 RASSF4Q9H2L5 321 aa6.38□□□□□ -1.39
LSM1P1-201ENST00000438629 JPH1Q9HDC5 661 aaPredicted RBP6.38□□□□□ -1.39
LSM1P1-201ENST00000438629 LATS2Q9NRM7 1088 aa6.38□□□□□ -1.39
LSM1P1-201ENST00000438629 STARD13Q9Y3M8 1113 aa6.38□□□□□ -1.39
LSM1P1-201ENST00000438629 M0R082 166 aa6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 NFKBIEO00221 500 aa6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 EIF4EBP3O60516 100 aaPredicted RBP6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 IRS1P35568 1242 aa6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 PTPN12Q05209 780 aaKnown RBP6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 ZNF385CQ66K41 422 aaPredicted RBP6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 PRPF40BQ6NWY9 871 aaKnown RBP6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 ZNF417Q8TAU3 575 aa6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 WHAMMQ8TF30 809 aa6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 NUDT8Q8WV74 236 aa6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 ZNF587Q96SQ5 575 aaPredicted RBP6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 SETDB2Q96T68 719 aa6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 POP1Q99575 1024 aaKnown RBP6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 C12orf49Q9H741 205 aa6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 FAM8A1Q9UBU6 413 aa6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 NAGPAQ9UK23 515 aa6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.37□□□□□ -1.39
LSM1P1-201ENST00000438629 TMEM238LA0A1B0GVL6 79 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 SHISA8B8ZZ34 492 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 VAMP1P23763 118 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 GSTT1P30711 240 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 RBM25P49756 843 aaKnown RBP6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 CABP4P57796 275 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 ATP11AP98196 1134 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 TAGLNQ01995 201 aaKnown RBP6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 GRM2Q14416 872 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 NXPE4Q6UWF7 544 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 ZSCAN1Q8NBB4 408 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 BSNDQ8WZ55 320 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 TCF12Q99081 682 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 ADAM19Q9H013 955 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 RRAGCQ9HB90 399 aa6.36□□□□□ -1.39
LSM1P1-201ENST00000438629 A0A096LPE4 126 aa6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 A0A1W2PPZ6 126 aa6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 E9PSI1 815 aa6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 ALBP02768 609 aa6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 CDC27P30260 824 aa6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 GDF6Q6KF10 455 aaPredicted RBP6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 PI16Q6UXB8 463 aa6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 DTHD1Q6ZMT9 781 aa6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 ASAP3Q8TDY4 903 aa6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 OSBPL7Q9BZF2 842 aa6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 VTI1BQ9UEU0 232 aa6.35□□□□□ -1.39
LSM1P1-201ENST00000438629 FAM181BA6NEQ2 426 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 SPDYE3A6NKU9 549 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 TRPA1O75762 1119 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 ARHGEF15O94989 841 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 ACPPP15309 386 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 AFF1P51825 1210 aaKnown RBP6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 RPS26P11Q5JNZ5 115 aaPredicted RBP6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 FAM117BQ6P1L5 589 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 WFDC8Q8IUA0 241 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 IL22RA1Q8N6P7 574 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 DCAF11Q8TEB1 546 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 MRRFQ96E11 262 aaKnown RBP6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 MKL2Q9ULH7 1088 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 PPM1HQ9ULR3 514 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 TRIM33Q9UPN9 1127 aa6.34□□□□□ -1.39
LSM1P1-201ENST00000438629 ITPKAP23677 461 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 ARL4DP49703 201 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 FCGRTP55899 365 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 MRPL58Q14197 206 aaKnown RBP6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 GRIK5Q16478 980 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 MSL1Q68DK7 614 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 PODNQ7Z5L7 613 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 MAP4K3Q8IVH8 894 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 BEND7Q8N7W2 519 aaPredicted RBP6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 GLIS3Q8NEA6 775 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 DDX54Q8TDD1 881 aaKnown RBP6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 LACRTQ9GZZ8 138 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 SRA1Q9HD15 236 aaKnown RBP6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 ABCB6Q9NP58 842 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 PPME1Q9Y570 386 aa6.33□□□□□ -1.4
LSM1P1-201ENST00000438629 GRIA4P48058 902 aa6.32□□□□□ -1.4
LSM1P1-201ENST00000438629 DGKGP49619 791 aa6.32□□□□□ -1.4
LSM1P1-201ENST00000438629 DTWD1Q8N5C7 304 aa6.32□□□□□ -1.4
LSM1P1-201ENST00000438629 ANKRD24Q8TF21 1146 aa6.32□□□□□ -1.4
LSM1P1-201ENST00000438629 WNT8BQ93098 351 aa6.32□□□□□ -1.4
LSM1P1-201ENST00000438629 CRELD1Q96HD1 420 aa6.32□□□□□ -1.4
LSM1P1-201ENST00000438629 CEP44Q9C0F1 390 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms