RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
HLA-DMB-259ENST00000438510 LPIN2Q92539 896 aa13.01□□□□□ -0.33
HLA-DMB-259ENST00000438510 MED23Q9ULK4 1368 aa13.01□□□□□ -0.33
HLA-DMB-259ENST00000438510 IFIT1P09914 478 aaKnown RBP13□□□□□ -0.33
HLA-DMB-259ENST00000438510 ARHGAP27Q6ZUM4 889 aa13□□□□□ -0.33
HLA-DMB-259ENST00000438510 CENPQQ7L2Z9 268 aaPredicted RBP13□□□□□ -0.33
HLA-DMB-259ENST00000438510 VPS33BQ9H267 617 aa13□□□□□ -0.33
HLA-DMB-259ENST00000438510 A0A1B0GUL7 405 aa12.99□□□□□ -0.33
HLA-DMB-259ENST00000438510 NFKBIEO00221 500 aa12.99□□□□□ -0.33
HLA-DMB-259ENST00000438510 FGFR2P21802 821 aa12.99□□□□□ -0.33
HLA-DMB-259ENST00000438510 WASHC4Q2M389 1173 aa12.99□□□□□ -0.33
HLA-DMB-259ENST00000438510 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
HLA-DMB-259ENST00000438510 C15orf52Q6ZUT6 534 aaKnown RBP12.99□□□□□ -0.33
HLA-DMB-259ENST00000438510 ZC3H12CQ9C0D7 883 aaKnown RBP12.99□□□□□ -0.33
HLA-DMB-259ENST00000438510 POLLQ9UGP5 575 aa12.99□□□□□ -0.33
HLA-DMB-259ENST00000438510 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
HLA-DMB-259ENST00000438510 GOLGB1Q14789 3259 aaKnown RBP12.99□□□□□ -0.33
HLA-DMB-259ENST00000438510 KDM2BQ8NHM5 1336 aa12.98□□□□□ -0.33
HLA-DMB-259ENST00000438510 YY1P25490 414 aa12.98□□□□□ -0.33
HLA-DMB-259ENST00000438510 ANKRD45Q5TZF3 282 aa12.98□□□□□ -0.33
HLA-DMB-259ENST00000438510 IL1RAPL2Q9NP60 686 aa12.98□□□□□ -0.33
HLA-DMB-259ENST00000438510 G3V3G9 751 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 PPIP5K2O43314 1243 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 IARSP41252 1262 aaKnown RBP12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 RASSF7Q02833 373 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 KIAA2012Q0VF49 1180 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 CAVIN4Q5BKX8 364 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 GORABQ5T7V8 394 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 ZNF804AQ7Z570 1209 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 AACSQ86V21 672 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 VPS37DQ86XT2 251 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 NEUROD6Q96NK8 337 aa12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 ZNF646O15015 1829 aaPredicted RBP12.97□□□□□ -0.33
HLA-DMB-259ENST00000438510 AK9Q5TCS8 1911 aa12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 IRS2Q9Y4H2 1338 aa12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 SNAP23O00161 211 aa12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 LMNB1P20700 586 aa12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 TIMM10P62072 90 aa12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 NUCB1Q02818 461 aa12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 AOC3Q16853 763 aa12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 LARGE2Q8N3Y3 721 aa12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 EAF2Q96CJ1 260 aaPredicted RBP12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 XAGE2Q96GT9 111 aa12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 GPR101Q96P66 508 aaPredicted RBP12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 ZNF277Q9NRM2 450 aaPredicted RBP12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.33
HLA-DMB-259ENST00000438510 AKAP11Q9UKA4 1901 aa12.96□□□□□ -0.34
HLA-DMB-259ENST00000438510 SCN9AQ15858 1988 aa12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 KLRK1P26718 216 aa12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 CCDC158Q5M9N0 1113 aa12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 NIM1KQ8IY84 436 aa12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 JDP2Q8WYK2 163 aa12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 COA1Q9GZY4 146 aa12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 CCDC8Q9H0W5 538 aaPredicted RBP12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 BCL11AQ9H165 835 aa12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
HLA-DMB-259ENST00000438510 COL4A5P29400 1685 aa12.94□□□□□ -0.34
HLA-DMB-259ENST00000438510 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
HLA-DMB-259ENST00000438510 ADORA1P30542 326 aa12.94□□□□□ -0.34
HLA-DMB-259ENST00000438510 GYG1P46976 350 aa12.94□□□□□ -0.34
HLA-DMB-259ENST00000438510 FAM84BQ96KN1 310 aaPredicted RBP12.94□□□□□ -0.34
HLA-DMB-259ENST00000438510 DBNDD2Q9BQY9 259 aa12.94□□□□□ -0.34
HLA-DMB-259ENST00000438510 LNPKQ9C0E8 428 aa12.94□□□□□ -0.34
HLA-DMB-259ENST00000438510 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
HLA-DMB-259ENST00000438510 GTF3C3Q9Y5Q9 886 aa12.94□□□□□ -0.34
HLA-DMB-259ENST00000438510 MYH7P12883 1935 aa12.94□□□□□ -0.34
HLA-DMB-259ENST00000438510 UQCRFS1P1P0C7P4 283 aa12.93□□□□□ -0.34
HLA-DMB-259ENST00000438510 TTC39AQ5SRH9 613 aa12.93□□□□□ -0.34
HLA-DMB-259ENST00000438510 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
HLA-DMB-259ENST00000438510 PODNQ7Z5L7 613 aa12.93□□□□□ -0.34
HLA-DMB-259ENST00000438510 FBXO33Q7Z6M2 555 aa12.93□□□□□ -0.34
HLA-DMB-259ENST00000438510 TXNRD3Q86VQ6 643 aa12.93□□□□□ -0.34
HLA-DMB-259ENST00000438510 MAST2Q6P0Q8 1798 aa12.93□□□□□ -0.34
HLA-DMB-259ENST00000438510 DOCK2Q92608 1830 aa12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 SEMA3EO15041 775 aa12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 ZBTB22O15209 634 aa12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 ECE2O60344 883 aa12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 FRAT2O75474 233 aaPredicted RBP12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 IL1R1P14778 569 aa12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 BCAMP50895 628 aa12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 DOK7Q18PE1 504 aa12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 DBNDD1Q9H9R9 158 aa12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 CD209Q9NNX6 404 aa12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 TLR7Q9NYK1 1049 aaKnown RBP12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 RNF181Q9P0P0 153 aa12.92□□□□□ -0.34
HLA-DMB-259ENST00000438510 TTC41PQ6P2S7 1318 aa12.91□□□□□ -0.34
HLA-DMB-259ENST00000438510 ZC3H4Q9UPT8 1303 aaKnown RBP12.91□□□□□ -0.34
HLA-DMB-259ENST00000438510 MX1P20591 662 aa12.91□□□□□ -0.34
HLA-DMB-259ENST00000438510 ARID4AP29374 1257 aaPredicted RBP12.91□□□□□ -0.34
HLA-DMB-259ENST00000438510 PHKA1P46020 1223 aa12.91□□□□□ -0.34
HLA-DMB-259ENST00000438510 PRELPP51888 382 aa12.91□□□□□ -0.34
HLA-DMB-259ENST00000438510 ZNF512BQ96KM6 892 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms