RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 FBXW7Q969H0 707 aa11.29□□□□□ -0.6
SCRN1-208ENST00000438497 ZNF609O15014 1411 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 H0YGN5 161 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 IGF2BP3O00425 579 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCRN1-208ENST00000438497 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
SCRN1-208ENST00000438497 ATP2B4P23634 1241 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 RIPK4P57078 832 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 SP3Q02447 781 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 TRIM28Q13263 835 aaKnown RBP11.28□□□□□ -0.6
SCRN1-208ENST00000438497 SLC4A8Q2Y0W8 1093 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 OTUD5Q96G74 571 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 MXD3Q9BW11 206 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 FZD1Q9UP38 647 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 XDHP47989 1333 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 MAPK8IP3Q9UPT6 1336 aa11.28□□□□□ -0.6
SCRN1-208ENST00000438497 RBBP6Q7Z6E9 1792 aaKnown RBP11.27□□□□□ -0.61
SCRN1-208ENST00000438497 PPP1R12BO60237 982 aaPredicted RBP11.27□□□□□ -0.61
SCRN1-208ENST00000438497 ZBTB48P10074 688 aaPredicted RBP11.27□□□□□ -0.61
SCRN1-208ENST00000438497 MMP14P50281 582 aa11.27□□□□□ -0.61
SCRN1-208ENST00000438497 ARHGEF6Q15052 776 aa11.27□□□□□ -0.61
SCRN1-208ENST00000438497 APOBEC3FQ8IUX4 373 aaKnown RBP11.27□□□□□ -0.61
SCRN1-208ENST00000438497 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
SCRN1-208ENST00000438497 COL4A1P02462 1669 aa11.27□□□□□ -0.61
SCRN1-208ENST00000438497 PSME4Q14997 1843 aa11.26□□□□□ -0.61
SCRN1-208ENST00000438497 WTIPA6NIX2 430 aaPredicted RBP11.26□□□□□ -0.61
SCRN1-208ENST00000438497 SASH1O94885 1247 aa11.26□□□□□ -0.61
SCRN1-208ENST00000438497 CRHR2Q13324 411 aa11.26□□□□□ -0.61
SCRN1-208ENST00000438497 CCDC152Q4G0S7 254 aa11.26□□□□□ -0.61
SCRN1-208ENST00000438497 DACT2Q5SW24 774 aa11.26□□□□□ -0.61
SCRN1-208ENST00000438497 ANKRD18AQ8IVF6 992 aa11.26□□□□□ -0.61
SCRN1-208ENST00000438497 ZBTB38Q8NAP3 1195 aaPredicted RBP11.26□□□□□ -0.61
SCRN1-208ENST00000438497 WNK4Q96J92 1243 aa11.26□□□□□ -0.61
SCRN1-208ENST00000438497 ZNF333Q96JL9 665 aa11.26□□□□□ -0.61
SCRN1-208ENST00000438497 CCDC85AQ96PX6 553 aaPredicted RBP11.26□□□□□ -0.61
SCRN1-208ENST00000438497 PDE8AO60658 829 aa11.25□□□□□ -0.61
SCRN1-208ENST00000438497 MAP3K11Q16584 847 aa11.25□□□□□ -0.61
SCRN1-208ENST00000438497 SLC9C1Q4G0N8 1177 aa11.25□□□□□ -0.61
SCRN1-208ENST00000438497 STRIP1Q5VSL9 837 aa11.25□□□□□ -0.61
SCRN1-208ENST00000438497 TTLL5Q6EMB2 1281 aa11.25□□□□□ -0.61
SCRN1-208ENST00000438497 CHRDL2Q6WN34 429 aa11.25□□□□□ -0.61
SCRN1-208ENST00000438497 CLMNQ96JQ2 1002 aa11.25□□□□□ -0.61
SCRN1-208ENST00000438497 DEFB129Q9H1M3 183 aa11.25□□□□□ -0.61
SCRN1-208ENST00000438497 DBF4Q9UBU7 674 aaPredicted RBP11.25□□□□□ -0.61
SCRN1-208ENST00000438497 MYO3BQ8WXR4 1341 aa11.25□□□□□ -0.61
SCRN1-208ENST00000438497 UNCXA6NJT0 531 aa11.24□□□□□ -0.61
SCRN1-208ENST00000438497 MYCP01106 439 aaPredicted RBP11.24□□□□□ -0.61
SCRN1-208ENST00000438497 KRT24Q2M2I5 525 aa11.24□□□□□ -0.61
SCRN1-208ENST00000438497 HDGFL1Q5TGJ6 251 aa11.24□□□□□ -0.61
SCRN1-208ENST00000438497 RIC3Q7Z5B4 369 aa11.24□□□□□ -0.61
SCRN1-208ENST00000438497 CCER1Q8TC90 406 aaPredicted RBP11.24□□□□□ -0.61
SCRN1-208ENST00000438497 DPF3Q92784 378 aa11.24□□□□□ -0.61
SCRN1-208ENST00000438497 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
SCRN1-208ENST00000438497 HYPKQ9NX55 129 aa11.24□□□□□ -0.61
SCRN1-208ENST00000438497 LAS1LQ9Y4W2 734 aaKnown RBP11.24□□□□□ -0.61
SCRN1-208ENST00000438497 TRIOBPQ9H2D6 2365 aa11.24□□□□□ -0.61
SCRN1-208ENST00000438497 MKI67P46013 3256 aaKnown RBP11.24□□□□□ -0.61
SCRN1-208ENST00000438497 CEP290O15078 2479 aa11.23□□□□□ -0.61
SCRN1-208ENST00000438497 CAP1Q01518 475 aa11.23□□□□□ -0.61
SCRN1-208ENST00000438497 SUPT20HL1Q3ZLR7 823 aa11.23□□□□□ -0.61
SCRN1-208ENST00000438497 KIAA0825Q8IV33 1275 aa11.23□□□□□ -0.61
SCRN1-208ENST00000438497 PTPN18Q99952 460 aa11.23□□□□□ -0.61
SCRN1-208ENST00000438497 COA1Q9GZY4 146 aa11.23□□□□□ -0.61
SCRN1-208ENST00000438497 RBM27Q9P2N5 1060 aaKnown RBP11.23□□□□□ -0.61
SCRN1-208ENST00000438497 PTCH2Q9Y6C5 1203 aa11.23□□□□□ -0.61
SCRN1-208ENST00000438497 CHL1O00533 1208 aa11.22□□□□□ -0.61
SCRN1-208ENST00000438497 USP2O75604 605 aaPredicted RBP11.22□□□□□ -0.61
SCRN1-208ENST00000438497 PCCAP05165 728 aaPredicted RBP11.22□□□□□ -0.61
SCRN1-208ENST00000438497 ZEB1P37275 1124 aaPredicted RBP11.22□□□□□ -0.61
SCRN1-208ENST00000438497 IREB2P48200 963 aaKnown RBP11.22□□□□□ -0.61
SCRN1-208ENST00000438497 CCT4P50991 539 aaKnown RBP11.22□□□□□ -0.61
SCRN1-208ENST00000438497 DLGAP5Q15398 846 aa11.22□□□□□ -0.61
SCRN1-208ENST00000438497 ZBED3Q96IU2 234 aaPredicted RBP11.22□□□□□ -0.61
SCRN1-208ENST00000438497 MINPP1Q9UNW1 487 aa11.22□□□□□ -0.61
SCRN1-208ENST00000438497 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
SCRN1-208ENST00000438497 GTF2IP78347 998 aa11.21□□□□□ -0.61
SCRN1-208ENST00000438497 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
SCRN1-208ENST00000438497 NEUROD2Q15784 382 aa11.21□□□□□ -0.61
SCRN1-208ENST00000438497 TXNRD3Q86VQ6 643 aa11.21□□□□□ -0.61
SCRN1-208ENST00000438497 CCDC191Q8NCU4 936 aa11.21□□□□□ -0.61
SCRN1-208ENST00000438497 CDC5LQ99459 802 aaKnown RBP11.21□□□□□ -0.61
SCRN1-208ENST00000438497 MYD88Q99836 296 aa11.21□□□□□ -0.61
SCRN1-208ENST00000438497 ZFYVE28Q9HCC9 887 aa11.21□□□□□ -0.61
SCRN1-208ENST00000438497 BSDC1Q9NW68 430 aaPredicted RBP11.21□□□□□ -0.61
SCRN1-208ENST00000438497 MED23Q9ULK4 1368 aa11.2□□□□□ -0.62
SCRN1-208ENST00000438497 GJA5P36382 358 aa11.2□□□□□ -0.62
SCRN1-208ENST00000438497 TMPOP42166 694 aaKnown RBP11.2□□□□□ -0.62
SCRN1-208ENST00000438497 TAF1CQ15572 869 aaPredicted RBP11.2□□□□□ -0.62
SCRN1-208ENST00000438497 NBPF12Q5TAG4 269 aaPredicted RBP11.2□□□□□ -0.62
SCRN1-208ENST00000438497 ANKRD13AQ8IZ07 590 aa11.2□□□□□ -0.62
SCRN1-208ENST00000438497 LEMD3Q9Y2U8 911 aa11.2□□□□□ -0.62
SCRN1-208ENST00000438497 PPP2R3BQ9Y5P8 575 aa11.2□□□□□ -0.62
SCRN1-208ENST00000438497 MYO1BO43795 1136 aa11.19□□□□□ -0.62
SCRN1-208ENST00000438497 HOXB7P09629 217 aa11.19□□□□□ -0.62
SCRN1-208ENST00000438497 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
SCRN1-208ENST00000438497 KIF22Q14807 665 aa11.19□□□□□ -0.62
SCRN1-208ENST00000438497 SH3TC2Q8TF17 1288 aa11.19□□□□□ -0.62
SCRN1-208ENST00000438497 PHAXQ9H814 394 aaKnown RBP11.19□□□□□ -0.62
SCRN1-208ENST00000438497 CWC25Q9NXE8 425 aaPredicted RBP11.19□□□□□ -0.62
SCRN1-208ENST00000438497 SZT2Q5T011 3432 aa11.18□□□□□ -0.62
SCRN1-208ENST00000438497 CENPFP49454 3210 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms