RNA–Protein interactions for RNA: ENST00000437826.6

CLPB-203, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 3,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-203ENST00000437826 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
CLPB-203ENST00000437826 RPAP1Q9BWH6 1393 aaPredicted RBP13.53□□□□□ -0.24
CLPB-203ENST00000437826 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.24
CLPB-203ENST00000437826 HDAC5Q9UQL6 1122 aa13.52□□□□□ -0.24
CLPB-203ENST00000437826 CCDC69A6NI79 296 aa13.52□□□□□ -0.25
CLPB-203ENST00000437826 ME1P48163 572 aa13.52□□□□□ -0.25
CLPB-203ENST00000437826 NKX1-1Q15270 411 aaPredicted RBP13.52□□□□□ -0.25
CLPB-203ENST00000437826 DDB1Q16531 1140 aa13.52□□□□□ -0.25
CLPB-203ENST00000437826 KMT5BQ4FZB7 885 aa13.52□□□□□ -0.25
CLPB-203ENST00000437826 FBXO38Q6PIJ6 1188 aa13.52□□□□□ -0.25
CLPB-203ENST00000437826 LMBR1LQ6UX01 489 aa13.52□□□□□ -0.25
CLPB-203ENST00000437826 HSPA4P34932 840 aa13.52□□□□□ -0.25
CLPB-203ENST00000437826 C11orf57Q6ZUT1 292 aaPredicted RBP13.52□□□□□ -0.25
CLPB-203ENST00000437826 NGLY1Q96IV0 654 aa13.52□□□□□ -0.25
CLPB-203ENST00000437826 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
CLPB-203ENST00000437826 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.25
CLPB-203ENST00000437826 SEC31AO94979 1220 aaKnown RBP13.51□□□□□ -0.25
CLPB-203ENST00000437826 KIF20AO95235 890 aa13.51□□□□□ -0.25
CLPB-203ENST00000437826 AOPEPQ8N6M6 819 aa13.51□□□□□ -0.25
CLPB-203ENST00000437826 INTS4Q96HW7 963 aaKnown RBP13.51□□□□□ -0.25
CLPB-203ENST00000437826 OGFRQ9NZT2 677 aa13.51□□□□□ -0.25
CLPB-203ENST00000437826 NHSL1Q5SYE7 1610 aa13.51□□□□□ -0.25
CLPB-203ENST00000437826 ZNF75DP51815 510 aa13.51□□□□□ -0.25
CLPB-203ENST00000437826 SF3A1Q15459 793 aaKnown RBP13.51□□□□□ -0.25
CLPB-203ENST00000437826 SEC62Q99442 399 aaKnown RBP13.51□□□□□ -0.25
CLPB-203ENST00000437826 SGSM2O43147 1006 aa13.51□□□□□ -0.25
CLPB-203ENST00000437826 UTP14CQ5TAP6 766 aaKnown RBP13.51□□□□□ -0.25
CLPB-203ENST00000437826 OSBPL3Q9H4L5 887 aa13.51□□□□□ -0.25
CLPB-203ENST00000437826 CTNNA3Q9UI47 895 aa13.51□□□□□ -0.25
CLPB-203ENST00000437826 SASH1O94885 1247 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 POLR3DP05423 398 aaPredicted RBP13.5□□□□□ -0.25
CLPB-203ENST00000437826 FAM98CQ17RN3 349 aaKnown RBP13.5□□□□□ -0.25
CLPB-203ENST00000437826 BLOC1S2Q6QNY1 142 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 NCOA5Q9HCD5 579 aaKnown RBP13.5□□□□□ -0.25
CLPB-203ENST00000437826 TBC1D2BQ9UPU7 963 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 ABCA3Q99758 1704 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 URI1O94763 535 aaPredicted RBP13.5□□□□□ -0.25
CLPB-203ENST00000437826 KCNQ4P56696 695 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 FAM182BQ5T319 152 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 TMC6Q7Z403 805 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 PDILTQ8N807 584 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 BRF1Q92994 677 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 ZNF594Q96JF6 807 aaPredicted RBP13.5□□□□□ -0.25
CLPB-203ENST00000437826 TMEM51Q9NW97 253 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 CWC25Q9NXE8 425 aaPredicted RBP13.5□□□□□ -0.25
CLPB-203ENST00000437826 SALL3Q9BXA9 1300 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
CLPB-203ENST00000437826 KRT222Q8N1A0 295 aa13.49□□□□□ -0.25
CLPB-203ENST00000437826 EAF2Q96CJ1 260 aaPredicted RBP13.49□□□□□ -0.25
CLPB-203ENST00000437826 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
CLPB-203ENST00000437826 STARD3NLO95772 234 aa13.49□□□□□ -0.25
CLPB-203ENST00000437826 PPARDQ03181 441 aa13.49□□□□□ -0.25
CLPB-203ENST00000437826 SYNE4Q8N205 404 aa13.49□□□□□ -0.25
CLPB-203ENST00000437826 CHMP4CQ96CF2 233 aa13.49□□□□□ -0.25
CLPB-203ENST00000437826 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
CLPB-203ENST00000437826 LMOD1P29536 600 aaPredicted RBP13.49□□□□□ -0.25
CLPB-203ENST00000437826 KIF6Q6ZMV9 814 aa13.49□□□□□ -0.25
CLPB-203ENST00000437826 DNAI1Q9UI46 699 aa13.49□□□□□ -0.25
CLPB-203ENST00000437826 ABCC6O95255 1503 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 IRX5P78411 483 aaPredicted RBP13.48□□□□□ -0.25
CLPB-203ENST00000437826 TFCP2Q12800 502 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 NMIQ13287 307 aaPredicted RBP13.48□□□□□ -0.25
CLPB-203ENST00000437826 PI4K2BQ8TCG2 481 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 NEUROD6Q96NK8 337 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 SPTLC3Q9NUV7 552 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
CLPB-203ENST00000437826 SMTNL1A8MU46 457 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 ARHGAP29Q52LW3 1261 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 GJB4Q9NTQ9 266 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 A0A1B0GVL5 298 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 ATP2B1P20020 1258 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 MTX1Q13505 466 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 ERC1Q8IUD2 1116 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 SLC4A9Q96Q91 983 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 STAP2Q9UGK3 403 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 ADAMTS7Q9UKP4 1686 aa13.48□□□□□ -0.25
CLPB-203ENST00000437826 MRC1P22897 1456 aa13.47□□□□□ -0.25
CLPB-203ENST00000437826 RAD50Q92878 1312 aa13.47□□□□□ -0.25
CLPB-203ENST00000437826 C10orf67Q8IYJ2 551 aa13.47□□□□□ -0.25
CLPB-203ENST00000437826 MNS1Q8NEH6 495 aa13.47□□□□□ -0.25
CLPB-203ENST00000437826 KIF18AQ8NI77 898 aa13.47□□□□□ -0.25
CLPB-203ENST00000437826 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
CLPB-203ENST00000437826 LSG1Q9H089 658 aaKnown RBP13.47□□□□□ -0.25
CLPB-203ENST00000437826 ECHDC1Q9NTX5 307 aa13.47□□□□□ -0.25
CLPB-203ENST00000437826 ZBTB1Q9Y2K1 713 aa13.47□□□□□ -0.25
CLPB-203ENST00000437826 KCNQ2O43526 872 aa13.47□□□□□ -0.25
CLPB-203ENST00000437826 HLFQ16534 295 aa13.47□□□□□ -0.25
CLPB-203ENST00000437826 CCAR1Q8IX12 1150 aaKnown RBP13.47□□□□□ -0.25
CLPB-203ENST00000437826 DHX37Q8IY37 1157 aaKnown RBP13.47□□□□□ -0.25
CLPB-203ENST00000437826 NOL10Q9BSC4 688 aaKnown RBP13.47□□□□□ -0.25
CLPB-203ENST00000437826 TEX35Q5T0J7 233 aa13.46□□□□□ -0.25
CLPB-203ENST00000437826 LEO1Q8WVC0 666 aaPredicted RBP13.46□□□□□ -0.25
CLPB-203ENST00000437826 KINO60870 393 aaKnown RBP13.46□□□□□ -0.25
CLPB-203ENST00000437826 PHACTR2O75167 634 aa13.46□□□□□ -0.25
CLPB-203ENST00000437826 HSP90AB3PQ58FF7 597 aa13.46□□□□□ -0.25
CLPB-203ENST00000437826 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.25
CLPB-203ENST00000437826 CCDC73Q6ZRK6 1079 aa13.46□□□□□ -0.25
CLPB-203ENST00000437826 TOMM22Q9NS69 142 aa13.46□□□□□ -0.25
CLPB-203ENST00000437826 SPATA31A1Q5TZJ5 1347 aa13.46□□□□□ -0.26
CLPB-203ENST00000437826 MARCH10Q8NA82 808 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms