RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SREK1Q8WXA9 508 aaKnown RBP18.08■□□□□ 0.48
PTPN13-204ENST00000436978 TSHZ3Q63HK5 1081 aa18.08■□□□□ 0.48
PTPN13-204ENST00000436978 CKAP4Q07065 602 aaKnown RBP18.07■□□□□ 0.48
PTPN13-204ENST00000436978 SPAG1Q07617 926 aa18.07■□□□□ 0.48
PTPN13-204ENST00000436978 LMBR1LQ6UX01 489 aa18.07■□□□□ 0.48
PTPN13-204ENST00000436978 RNF113AO15541 343 aaKnown RBP18.07■□□□□ 0.48
PTPN13-204ENST00000436978 BIN1O00499 593 aa18.07■□□□□ 0.48
PTPN13-204ENST00000436978 LDHBP07195 334 aaKnown RBP18.07■□□□□ 0.48
PTPN13-204ENST00000436978 ZNF165P49910 485 aa18.07■□□□□ 0.48
PTPN13-204ENST00000436978 APBB1IPQ7Z5R6 666 aaPredicted RBP18.07■□□□□ 0.48
PTPN13-204ENST00000436978 MAGEB6Q8N7X4 407 aa18.07■□□□□ 0.48
PTPN13-204ENST00000436978 NAP1L4Q99733 375 aaKnown RBP18.07■□□□□ 0.48
PTPN13-204ENST00000436978 ZMYM4Q5VZL5 1548 aa18.07■□□□□ 0.48
PTPN13-204ENST00000436978 GNA11P29992 359 aa18.07■□□□□ 0.48
PTPN13-204ENST00000436978 ADCY5O95622 1261 aa18.07■□□□□ 0.48
PTPN13-204ENST00000436978 FMNL3Q8IVF7 1028 aa18.07■□□□□ 0.48
PTPN13-204ENST00000436978 SH2D4AQ9H788 454 aa18.07■□□□□ 0.48
PTPN13-204ENST00000436978 ARHGEF5Q12774 1597 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 LMOD1P29536 600 aaPredicted RBP18.06■□□□□ 0.48
PTPN13-204ENST00000436978 RAD50Q92878 1312 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 BICDL2A1A5D9 508 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 PLCD4Q9BRC7 762 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 IMPG2Q9BZV3 1241 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 SBNO1A3KN83 1393 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
PTPN13-204ENST00000436978 SLC39A6Q13433 755 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 SNW1Q13573 536 aaKnown RBP18.06■□□□□ 0.48
PTPN13-204ENST00000436978 CPLX3Q8WVH0 158 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 IP6K1Q92551 441 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 FSD2A1L4K1 749 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 PSMA7O14818 248 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 TFCP2L1Q9NZI6 479 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 TFIP11Q9UBB9 837 aaKnown RBP18.06■□□□□ 0.48
PTPN13-204ENST00000436978 TNNT1P13805 278 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 TMX3Q96JJ7 454 aa18.06■□□□□ 0.48
PTPN13-204ENST00000436978 CCDC171Q6TFL3 1326 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 ARHGEF10O15013 1369 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 CYLC1P35663 651 aaPredicted RBP18.05■□□□□ 0.48
PTPN13-204ENST00000436978 PPM1FP49593 454 aaPredicted RBP18.05■□□□□ 0.48
PTPN13-204ENST00000436978 SELENOOQ9BVL4 669 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 FAM107BQ9H098 131 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 PAXBP1Q9Y5B6 917 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 IKBKGQ9Y6K9 419 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 F8W031 263 aaPredicted RBP18.05■□□□□ 0.48
PTPN13-204ENST00000436978 N4BP3O15049 544 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 LMAN1P49257 510 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 BRF1Q92994 677 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 RASAL2Q9UJF2 1139 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 RRAGBQ5VZM2 374 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 JARID2Q92833 1246 aaPredicted RBP18.05■□□□□ 0.48
PTPN13-204ENST00000436978 JADE2Q9NQC1 790 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 HLTFQ14527 1009 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPN13-204ENST00000436978 LARP6Q9BRS8 491 aaKnown RBP18.05■□□□□ 0.48
PTPN13-204ENST00000436978 PRPF4BQ13523 1007 aaKnown RBP18.05■□□□□ 0.48
PTPN13-204ENST00000436978 DENND2AQ9ULE3 1009 aa18.05■□□□□ 0.48
PTPN13-204ENST00000436978 PHACTR2O75167 634 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 PLS1Q14651 629 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 COMMD10Q9Y6G5 202 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 ANXA1P04083 346 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
PTPN13-204ENST00000436978 UBASH3AP57075 661 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 HOMER2Q9NSB8 354 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 POLKQ9UBT6 870 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 CHD1O14646 1710 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 RNMTO43148 476 aaKnown RBP18.04■□□□□ 0.48
PTPN13-204ENST00000436978 KLHL40Q2TBA0 621 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
PTPN13-204ENST00000436978 MRPS27Q92552 414 aaKnown RBP18.04■□□□□ 0.48
PTPN13-204ENST00000436978 USP25Q9UHP3 1055 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 SSX2IPQ9Y2D8 614 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 IGHDP01880 384 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 DNA2P51530 1060 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 BCCIPQ9P287 314 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPN13-204ENST00000436978 NMIQ13287 307 aaPredicted RBP18.03■□□□□ 0.48
PTPN13-204ENST00000436978 MCM9Q9NXL9 1143 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 HOXC9P31274 260 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 VEZTQ9HBM0 779 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 ADGRL2O95490 1459 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 HELLSQ9NRZ9 838 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 C8orf58Q8NAV2 365 aa18.03■□□□□ 0.48
PTPN13-204ENST00000436978 PARP10Q53GL7 1025 aa18.02■□□□□ 0.48
PTPN13-204ENST00000436978 BRAPQ7Z569 592 aa18.02■□□□□ 0.48
PTPN13-204ENST00000436978 MSANTD4Q8NCY6 345 aa18.02■□□□□ 0.48
PTPN13-204ENST00000436978 KIAA0753Q2KHM9 967 aa18.02■□□□□ 0.48
PTPN13-204ENST00000436978 TRIM75PA6NK02 468 aa18.02■□□□□ 0.48
PTPN13-204ENST00000436978 MAST3O60307 1309 aa18.02■□□□□ 0.48
PTPN13-204ENST00000436978 CTR9Q6PD62 1173 aa18.02■□□□□ 0.47
PTPN13-204ENST00000436978 CLEC11AQ9Y240 323 aa18.02■□□□□ 0.47
PTPN13-204ENST00000436978 RRP9O43818 475 aaKnown RBP18.02■□□□□ 0.47
PTPN13-204ENST00000436978 ZSCAN23Q3MJ62 389 aa18.02■□□□□ 0.47
PTPN13-204ENST00000436978 SPECC1Q5M775 1068 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 FAM13AO94988 1023 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 GCP02774 474 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 FERP16591 822 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 ATL3Q6DD88 541 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 LRSAM1Q6UWE0 723 aa18.01■□□□□ 0.47
PTPN13-204ENST00000436978 C16orf45Q96MC5 204 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms