RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 HSP90B1P14625 803 aaKnown RBP13.78□□□□□ -0.2
HMGCL-204ENST00000436439 RPS12P25398 132 aaKnown RBP13.78□□□□□ -0.2
HMGCL-204ENST00000436439 CTSWP56202 376 aa13.78□□□□□ -0.2
HMGCL-204ENST00000436439 RBM26Q5T8P6 1007 aaKnown RBP13.78□□□□□ -0.2
HMGCL-204ENST00000436439 RLBP1P12271 317 aa13.77□□□□□ -0.21
HMGCL-204ENST00000436439 ANKRD18AQ8IVF6 992 aa13.77□□□□□ -0.21
HMGCL-204ENST00000436439 FTSJ3Q8IY81 847 aaKnown RBP13.77□□□□□ -0.21
HMGCL-204ENST00000436439 TTLL11Q8NHH1 800 aa13.77□□□□□ -0.21
HMGCL-204ENST00000436439 EXOC6Q8TAG9 804 aa13.77□□□□□ -0.21
HMGCL-204ENST00000436439 CRBNQ96SW2 442 aa13.77□□□□□ -0.21
HMGCL-204ENST00000436439 TSKSQ9UJT2 592 aa13.77□□□□□ -0.21
HMGCL-204ENST00000436439 ASTN2O75129 1339 aaPredicted RBP13.77□□□□□ -0.21
HMGCL-204ENST00000436439 A0A1B0GUL6 1792 aa13.77□□□□□ -0.21
HMGCL-204ENST00000436439 NEURL1BA8MQ27 555 aa13.76□□□□□ -0.21
HMGCL-204ENST00000436439 ADM5C9JUS6 153 aa13.76□□□□□ -0.21
HMGCL-204ENST00000436439 KIF4BQ2VIQ3 1234 aa13.76□□□□□ -0.21
HMGCL-204ENST00000436439 PANK1Q8TE04 598 aa13.76□□□□□ -0.21
HMGCL-204ENST00000436439 HHIPL1Q96JK4 782 aa13.76□□□□□ -0.21
HMGCL-204ENST00000436439 GREM2Q9H772 168 aa13.76□□□□□ -0.21
HMGCL-204ENST00000436439 XDHP47989 1333 aa13.76□□□□□ -0.21
HMGCL-204ENST00000436439 G3V3G9 751 aa13.75□□□□□ -0.21
HMGCL-204ENST00000436439 MAP2K2P36507 400 aa13.75□□□□□ -0.21
HMGCL-204ENST00000436439 FLIIQ13045 1269 aa13.75□□□□□ -0.21
HMGCL-204ENST00000436439 MVPQ14764 893 aaKnown RBP13.75□□□□□ -0.21
HMGCL-204ENST00000436439 DCAF8Q5TAQ9 597 aa13.75□□□□□ -0.21
HMGCL-204ENST00000436439 KRT26Q7Z3Y9 468 aa13.75□□□□□ -0.21
HMGCL-204ENST00000436439 ZIC5Q96T25 663 aa13.75□□□□□ -0.21
HMGCL-204ENST00000436439 TNNQ9UQP3 1299 aa13.75□□□□□ -0.21
HMGCL-204ENST00000436439 CASP8AP2Q9UKL3 1982 aa13.75□□□□□ -0.21
HMGCL-204ENST00000436439 ZNF609O15014 1411 aa13.75□□□□□ -0.21
HMGCL-204ENST00000436439 H7C1W4 665 aa13.74□□□□□ -0.21
HMGCL-204ENST00000436439 ATP2B4P23634 1241 aa13.74□□□□□ -0.21
HMGCL-204ENST00000436439 NEXNQ0ZGT2 675 aa13.74□□□□□ -0.21
HMGCL-204ENST00000436439 RSBN1LQ6PCB5 846 aaPredicted RBP13.74□□□□□ -0.21
HMGCL-204ENST00000436439 UBE3BQ7Z3V4 1068 aa13.74□□□□□ -0.21
HMGCL-204ENST00000436439 CLUAP1Q96AJ1 413 aa13.74□□□□□ -0.21
HMGCL-204ENST00000436439 GGA3Q9NZ52 723 aa13.74□□□□□ -0.21
HMGCL-204ENST00000436439 DDX19BQ9UMR2 479 aa13.74□□□□□ -0.21
HMGCL-204ENST00000436439 MINPP1Q9UNW1 487 aa13.74□□□□□ -0.21
HMGCL-204ENST00000436439 CASP7P55210 303 aa13.73□□□□□ -0.21
HMGCL-204ENST00000436439 HUNKP57058 714 aa13.73□□□□□ -0.21
HMGCL-204ENST00000436439 INTS3Q68E01 1043 aaKnown RBP13.73□□□□□ -0.21
HMGCL-204ENST00000436439 DCPSQ96C86 337 aaKnown RBP13.73□□□□□ -0.21
HMGCL-204ENST00000436439 GMLQ99445 158 aa13.73□□□□□ -0.21
HMGCL-204ENST00000436439 CDC5LQ99459 802 aaKnown RBP13.73□□□□□ -0.21
HMGCL-204ENST00000436439 BEGAINQ9BUH8 593 aa13.73□□□□□ -0.21
HMGCL-204ENST00000436439 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
HMGCL-204ENST00000436439 BSDC1Q9NW68 430 aaPredicted RBP13.73□□□□□ -0.21
HMGCL-204ENST00000436439 COG6Q9Y2V7 657 aa13.73□□□□□ -0.21
HMGCL-204ENST00000436439 ZNF280AP59817 542 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-204ENST00000436439 GCKRQ14397 625 aa13.72□□□□□ -0.21
HMGCL-204ENST00000436439 TXNRD3Q86VQ6 643 aa13.72□□□□□ -0.21
HMGCL-204ENST00000436439 TMEM57Q8N5G2 664 aa13.72□□□□□ -0.21
HMGCL-204ENST00000436439 AGBL3Q8NEM8 1001 aa13.72□□□□□ -0.21
HMGCL-204ENST00000436439 CHMP4BQ9H444 224 aaKnown RBP13.72□□□□□ -0.21
HMGCL-204ENST00000436439 GBA2Q9HCG7 927 aaPredicted RBP13.72□□□□□ -0.21
HMGCL-204ENST00000436439 MED23Q9ULK4 1368 aa13.72□□□□□ -0.21
HMGCL-204ENST00000436439 FAM155AB1AL88 458 aaPredicted RBP13.71□□□□□ -0.21
HMGCL-204ENST00000436439 CCT4P50991 539 aaKnown RBP13.71□□□□□ -0.21
HMGCL-204ENST00000436439 FKBP5Q13451 457 aaPredicted RBP13.71□□□□□ -0.21
HMGCL-204ENST00000436439 PODNQ7Z5L7 613 aa13.71□□□□□ -0.21
HMGCL-204ENST00000436439 ABHD8Q96I13 439 aa13.71□□□□□ -0.21
HMGCL-204ENST00000436439 MXD3Q9BW11 206 aa13.71□□□□□ -0.21
HMGCL-204ENST00000436439 SCAF8Q9UPN6 1271 aaKnown RBP13.71□□□□□ -0.21
HMGCL-204ENST00000436439 AKAP11Q9UKA4 1901 aa13.71□□□□□ -0.21
HMGCL-204ENST00000436439 USP17L3A6NCW0 530 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 USP17L4A6NCW7 530 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 ITGA6P23229 1130 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 KLRK1P26718 216 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 SCARF1Q14162 830 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 FAM161AQ3B820 660 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 ANGEL2Q5VTE6 544 aaKnown RBP13.71□□□□□ -0.22
HMGCL-204ENST00000436439 RGMBQ6NW40 437 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 CDCA5Q96FF9 252 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 PLA2G12BQ9BX93 195 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 MYOZ2Q9NPC6 264 aa13.71□□□□□ -0.22
HMGCL-204ENST00000436439 CSF1RP07333 972 aa13.7□□□□□ -0.22
HMGCL-204ENST00000436439 NOGQ13253 232 aa13.7□□□□□ -0.22
HMGCL-204ENST00000436439 ITPRIPQ8IWB1 547 aa13.7□□□□□ -0.22
HMGCL-204ENST00000436439 SULF1Q8IWU6 871 aa13.7□□□□□ -0.22
HMGCL-204ENST00000436439 C2orf69Q8N8R5 385 aa13.7□□□□□ -0.22
HMGCL-204ENST00000436439 PAPPA2Q9BXP8 1791 aa13.69□□□□□ -0.22
HMGCL-204ENST00000436439 F6X3S4 739 aa13.69□□□□□ -0.22
HMGCL-204ENST00000436439 ZBTB7BO15156 539 aaPredicted RBP13.69□□□□□ -0.22
HMGCL-204ENST00000436439 USP17L8P0C7I0 530 aa13.69□□□□□ -0.22
HMGCL-204ENST00000436439 IGHMBP2P38935 993 aaKnown RBP13.69□□□□□ -0.22
HMGCL-204ENST00000436439 DACT2Q5SW24 774 aa13.69□□□□□ -0.22
HMGCL-204ENST00000436439 LINS1Q8NG48 757 aa13.69□□□□□ -0.22
HMGCL-204ENST00000436439 NBPF9Q3BBW0 867 aa13.68□□□□□ -0.22
HMGCL-204ENST00000436439 FBXW7Q969H0 707 aa13.68□□□□□ -0.22
HMGCL-204ENST00000436439 ZBTB40Q9NUA8 1239 aa13.68□□□□□ -0.22
HMGCL-204ENST00000436439 LEMD3Q9Y2U8 911 aa13.68□□□□□ -0.22
HMGCL-204ENST00000436439 ECM29Q5VYK3 1845 aa13.68□□□□□ -0.22
HMGCL-204ENST00000436439 ZNF804BA4D1E1 1349 aa13.67□□□□□ -0.22
HMGCL-204ENST00000436439 SNAP23O00161 211 aa13.67□□□□□ -0.22
HMGCL-204ENST00000436439 CA12O43570 354 aa13.67□□□□□ -0.22
HMGCL-204ENST00000436439 ZNF157P51786 506 aaPredicted RBP13.67□□□□□ -0.22
HMGCL-204ENST00000436439 FOXO4P98177 505 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms