RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.6□□□□□ -1.036e-7■■□□□ 12.9
CPSF6-202ENST00000435070 ZSCAN12O43309 604 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 NBPF7P0C2Y1 421 aaPredicted RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 TXLNAP40222 546 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 CHMP4BP1P59074 171 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 ADCY9O60503 1353 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 CCP110O43303 1012 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 EIF3JO75822 258 aaKnown RBP8.59□□□□□ -1.03
CPSF6-202ENST00000435070 SLC3A2P08195 630 aaKnown RBP8.59□□□□□ -1.03
CPSF6-202ENST00000435070 MTX1Q13505 466 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 HDXQ7Z353 690 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 COG3Q96JB2 828 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 PNKPQ96T60 521 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 CCDC151A5D8V7 595 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 ECM2O94769 699 aaPredicted RBP8.59□□□□□ -1.03
CPSF6-202ENST00000435070 RPS6KB1P23443 525 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 TDO2P48775 406 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 MAP3K9P80192 1104 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 TADA2BQ86TJ2 420 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 EDC3Q96F86 508 aaKnown RBP8.59□□□□□ -1.03
CPSF6-202ENST00000435070 FSD1Q9BTV5 496 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 ZSCAN16Q9H4T2 348 aaPredicted RBP8.59□□□□□ -1.03
CPSF6-202ENST00000435070 PHAXQ9H814 394 aaKnown RBP8.59□□□□□ -1.03
CPSF6-202ENST00000435070 NCOA5Q9HCD5 579 aaKnown RBP8.59□□□□□ -1.03
CPSF6-202ENST00000435070 TOGARAM2Q6ZUX3 1019 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 HINFPQ9BQA5 517 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 NUTM2FA1L443 756 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 ANXA1P04083 346 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 RIN2Q8WYP3 895 aaPredicted RBP8.59□□□□□ -1.03
CPSF6-202ENST00000435070 KIAA1468Q9P260 1216 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 A0A0D9SFI3 127 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 ATP6V1AP38606 617 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 STK38Q15208 465 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 Q6ZUG5 572 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 MPHOSPH8Q99549 860 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 MRFAP1Q9Y605 127 aa8.59□□□□□ -1.03
CPSF6-202ENST00000435070 ANKRD1Q15327 319 aa8.59□□□□□ -1.04
CPSF6-202ENST00000435070 AACSQ86V21 672 aa8.59□□□□□ -1.04
CPSF6-202ENST00000435070 IQUBQ8NA54 791 aa8.59□□□□□ -1.04
CPSF6-202ENST00000435070 PUS7Q96PZ0 661 aaKnown RBP8.59□□□□□ -1.04
CPSF6-202ENST00000435070 PCDHA7Q9UN72 937 aa8.59□□□□□ -1.04
CPSF6-202ENST00000435070 MTF1Q14872 753 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 RSRC2Q7L4I2 434 aaKnown RBP8.58□□□□□ -1.04
CPSF6-202ENST00000435070 SSH3Q8TE77 659 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 CPLX3Q8WVH0 158 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 MRPS27Q92552 414 aaKnown RBP8.58□□□□□ -1.04
CPSF6-202ENST00000435070 EPB41L2O43491 1005 aaKnown RBP8.58□□□□□ -1.04
CPSF6-202ENST00000435070 ERLIN2O94905 339 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 CCT5P48643 541 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 BEND6Q5SZJ8 279 aaPredicted RBP8.58□□□□□ -1.04
CPSF6-202ENST00000435070 RASSF8Q8NHQ8 419 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 KAT2BQ92831 832 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 KCND1Q9NSA2 647 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 RAI14Q9P0K7 980 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 RCOR1Q9UKL0 485 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 NDUFB9Q9Y6M9 179 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 KIF4BQ2VIQ3 1234 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 ENGASEQ8NFI3 743 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 ECHDC1Q9NTX5 307 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 UHRF1BP1LA0JNW5 1464 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 A0A0U1RQJ8 604 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 CHGBP05060 677 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 ATRIPQ8WXE1 791 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 CLIC6Q96NY7 704 aa8.58□□□□□ -1.04
CPSF6-202ENST00000435070 BAG1Q99933 345 aaPredicted RBP8.58□□□□□ -1.04
CPSF6-202ENST00000435070 MAP2K7O14733 419 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 ADD1P35611 737 aaKnown RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 IDI1Q13907 227 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 EIF4A2Q14240 407 aaKnown RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 CASP8Q14790 479 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 HSP90AB2PQ58FF8 381 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 TTC19Q6DKK2 380 aaPredicted RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 CHST3Q7LGC8 479 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 ERC1Q8IUD2 1116 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 FANCLQ9NW38 375 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 MKRN1Q9UHC7 482 aaKnown RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 VSNL1P62760 191 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 RAB11FIP4Q86YS3 637 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 JPH2Q9BR39 696 aaPredicted RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 EHD4Q9H223 541 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 AOX1Q06278 1338 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 ERLIN1O75477 346 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 TUBB4AP04350 444 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 BRD3Q15059 726 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 AXDND1Q5T1B0 1012 aaPredicted RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 ZNF589Q86UQ0 364 aaPredicted RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 MAP4K1Q92918 833 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 KIAA1210Q9ULL0 1709 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 H0YHG0 523 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 MARCKSP29966 332 aaPredicted RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 AKAP17AQ02040 695 aaKnown RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 PSME1Q06323 249 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 SCRN1Q12765 414 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 PPP2R5AQ15172 486 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 TAF7Q15545 349 aaPredicted RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 EFCAB13Q8IY85 973 aa8.57□□□□□ -1.04
CPSF6-202ENST00000435070 ZNF622Q969S3 477 aaKnown RBP eCLIP8.57□□□□□ -1.043e-7■□□□□ 9.1
CPSF6-202ENST00000435070 ZNF396Q96N95 335 aaPredicted RBP8.57□□□□□ -1.04
CPSF6-202ENST00000435070 NCAPHQ15003 741 aa8.56□□□□□ -1.04
CPSF6-202ENST00000435070 CCDC129Q6ZRS4 1044 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms