RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 CASP7P55210 303 aa22.22■■□□□ 1.15
FAM3A-212ENST00000434658 NECTIN1Q15223 517 aa22.22■■□□□ 1.15
FAM3A-212ENST00000434658 ZSCAN23Q3MJ62 389 aa22.22■■□□□ 1.15
FAM3A-212ENST00000434658 RUFY3Q7L099 469 aa22.22■■□□□ 1.15
FAM3A-212ENST00000434658 UBE3BQ7Z3V4 1068 aa22.22■■□□□ 1.15
FAM3A-212ENST00000434658 SYNE4Q8N205 404 aa22.22■■□□□ 1.15
FAM3A-212ENST00000434658 NCLP19338 710 aaKnown RBP22.21■■□□□ 1.15
FAM3A-212ENST00000434658 CASTP20810 708 aaKnown RBP22.21■■□□□ 1.15
FAM3A-212ENST00000434658 PTPN12Q05209 780 aaKnown RBP22.21■■□□□ 1.15
FAM3A-212ENST00000434658 NMIQ13287 307 aaPredicted RBP22.21■■□□□ 1.15
FAM3A-212ENST00000434658 SLC10A5Q5PT55 438 aa22.21■■□□□ 1.15
FAM3A-212ENST00000434658 ZNF622Q969S3 477 aaKnown RBP eCLIP22.21■■□□□ 1.15
FAM3A-212ENST00000434658 FAM89AQ96GI7 184 aa22.21■■□□□ 1.15
FAM3A-212ENST00000434658 KLRG2A4D1S0 409 aaPredicted RBP22.2■■□□□ 1.14
FAM3A-212ENST00000434658 SRGNP10124 158 aa22.2■■□□□ 1.14
FAM3A-212ENST00000434658 VPS53Q5VIR6 699 aa22.2■■□□□ 1.14
FAM3A-212ENST00000434658 FOXD4L5Q5VV16 416 aaPredicted RBP22.2■■□□□ 1.14
FAM3A-212ENST00000434658 PRPF40BQ6NWY9 871 aaKnown RBP22.2■■□□□ 1.14
FAM3A-212ENST00000434658 FOXD4L4Q8WXT5 416 aaPredicted RBP22.2■■□□□ 1.14
FAM3A-212ENST00000434658 ZSWIM6Q9HCJ5 1215 aa22.2■■□□□ 1.14
FAM3A-212ENST00000434658 BCS1LQ9Y276 419 aa22.2■■□□□ 1.14
FAM3A-212ENST00000434658 RPAP1Q9BWH6 1393 aaPredicted RBP22.2■■□□□ 1.14
FAM3A-212ENST00000434658 MBD3O95983 291 aa22.2■■□□□ 1.14
FAM3A-212ENST00000434658 DALRD3Q5D0E6 543 aaKnown RBP22.2■■□□□ 1.14
FAM3A-212ENST00000434658 JARID2Q92833 1246 aaPredicted RBP22.2■■□□□ 1.14
FAM3A-212ENST00000434658 MAP4K1Q92918 833 aa22.2■■□□□ 1.14
FAM3A-212ENST00000434658 FAM227BQ96M60 508 aa22.2■■□□□ 1.14
FAM3A-212ENST00000434658 BOLA2Q9H3K6 86 aa22.2■■□□□ 1.14
FAM3A-212ENST00000434658 MED23Q9ULK4 1368 aa22.19■■□□□ 1.14
FAM3A-212ENST00000434658 CHAMP1Q96JM3 812 aa22.19■■□□□ 1.14
FAM3A-212ENST00000434658 NLRP3Q96P20 1036 aa22.19■■□□□ 1.14
FAM3A-212ENST00000434658 FSD1Q9BTV5 496 aa22.19■■□□□ 1.14
FAM3A-212ENST00000434658 RBM8AQ9Y5S9 174 aaKnown RBP22.19■■□□□ 1.14
FAM3A-212ENST00000434658 HCLS1P14317 486 aaPredicted RBP22.18■■□□□ 1.14
FAM3A-212ENST00000434658 ATP5JP18859 108 aa22.18■■□□□ 1.14
FAM3A-212ENST00000434658 TNNI3KQ59H18 835 aa22.18■■□□□ 1.14
FAM3A-212ENST00000434658 ZBTB38Q8NAP3 1195 aaPredicted RBP22.18■■□□□ 1.14
FAM3A-212ENST00000434658 MASTLQ96GX5 879 aa22.18■■□□□ 1.14
FAM3A-212ENST00000434658 JAKMIP1Q96N16 626 aaKnown RBP22.18■■□□□ 1.14
FAM3A-212ENST00000434658 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.18■■□□□ 1.14
FAM3A-212ENST00000434658 FPGT-TNNI3KV9GXZ4 949 aa22.18■■□□□ 1.14
FAM3A-212ENST00000434658 RFX7Q2KHR2 1363 aa22.18■■□□□ 1.14
FAM3A-212ENST00000434658 ZKSCAN1P17029 563 aaPredicted RBP22.17■■□□□ 1.14
FAM3A-212ENST00000434658 STYK1Q6J9G0 422 aa22.17■■□□□ 1.14
FAM3A-212ENST00000434658 TTLL6Q8N841 843 aa22.17■■□□□ 1.14
FAM3A-212ENST00000434658 CYP46A1Q9Y6A2 500 aa22.17■■□□□ 1.14
FAM3A-212ENST00000434658 RIC1Q4ADV7 1423 aa22.17■■□□□ 1.14
FAM3A-212ENST00000434658 H7C1W4 665 aa22.17■■□□□ 1.14
FAM3A-212ENST00000434658 ADCK5Q3MIX3 580 aa22.17■■□□□ 1.14
FAM3A-212ENST00000434658 CREB3L3Q68CJ9 461 aa22.17■■□□□ 1.14
FAM3A-212ENST00000434658 C3orf67Q6ZVT6 689 aa22.17■■□□□ 1.14
FAM3A-212ENST00000434658 ZSCAN31Q96LW9 406 aaPredicted RBP22.17■■□□□ 1.14
FAM3A-212ENST00000434658 RRAGDQ9NQL2 400 aaPredicted RBP22.17■■□□□ 1.14
FAM3A-212ENST00000434658 PDRG1Q9NUG6 133 aa22.17■■□□□ 1.14
FAM3A-212ENST00000434658 DBNLQ9UJU6 430 aaKnown RBP22.17■■□□□ 1.14
FAM3A-212ENST00000434658 BRCA1P38398 1863 aaKnown RBP22.17■■□□□ 1.14
FAM3A-212ENST00000434658 TNRC6CQ9HCJ0 1690 aaKnown RBP22.17■■□□□ 1.14
FAM3A-212ENST00000434658 COL11A2P13942 1736 aaPredicted RBP22.16■■□□□ 1.14
FAM3A-212ENST00000434658 A0A0D9SFI3 127 aa22.16■■□□□ 1.14
FAM3A-212ENST00000434658 GRIN3BO60391 1043 aa22.16■■□□□ 1.14
FAM3A-212ENST00000434658 PCCAP05165 728 aaPredicted RBP22.16■■□□□ 1.14
FAM3A-212ENST00000434658 NPR1P16066 1061 aa22.16■■□□□ 1.14
FAM3A-212ENST00000434658 TFCP2Q12800 502 aa22.16■■□□□ 1.14
FAM3A-212ENST00000434658 DLEC1Q9Y238 1755 aa22.16■■□□□ 1.14
FAM3A-212ENST00000434658 IRS4O14654 1257 aaPredicted RBP22.15■■□□□ 1.14
FAM3A-212ENST00000434658 NASPP49321 788 aaPredicted RBP22.15■■□□□ 1.14
FAM3A-212ENST00000434658 CRY2Q49AN0 593 aa22.15■■□□□ 1.14
FAM3A-212ENST00000434658 SH2B1Q9NRF2 756 aaPredicted RBP22.15■■□□□ 1.14
FAM3A-212ENST00000434658 CPA1P15085 419 aa22.15■■□□□ 1.14
FAM3A-212ENST00000434658 CNKSR1Q969H4 720 aa22.15■■□□□ 1.14
FAM3A-212ENST00000434658 FOXO4P98177 505 aa22.14■■□□□ 1.13
FAM3A-212ENST00000434658 RPGRQ92834 1020 aaKnown RBP22.14■■□□□ 1.13
FAM3A-212ENST00000434658 TMEM63CQ9P1W3 806 aa22.14■■□□□ 1.13
FAM3A-212ENST00000434658 TCHHQ07283 1943 aa22.14■■□□□ 1.13
FAM3A-212ENST00000434658 SLC27A2O14975 620 aa22.13■■□□□ 1.13
FAM3A-212ENST00000434658 KCNJ4P48050 445 aa22.13■■□□□ 1.13
FAM3A-212ENST00000434658 RBM27Q9P2N5 1060 aaKnown RBP22.13■■□□□ 1.13
FAM3A-212ENST00000434658 SMC3Q9UQE7 1217 aa22.13■■□□□ 1.13
FAM3A-212ENST00000434658 LARGE1O95461 756 aa22.13■■□□□ 1.13
FAM3A-212ENST00000434658 PSMA5P28066 241 aa22.13■■□□□ 1.13
FAM3A-212ENST00000434658 CCDC173Q0VFZ6 552 aa22.13■■□□□ 1.13
FAM3A-212ENST00000434658 RNF20Q5VTR2 975 aa22.13■■□□□ 1.13
FAM3A-212ENST00000434658 LMBR1LQ6UX01 489 aa22.13■■□□□ 1.13
FAM3A-212ENST00000434658 NSFL1CQ9UNZ2 370 aaKnown RBP22.13■■□□□ 1.13
FAM3A-212ENST00000434658 ZSCAN22P10073 491 aaPredicted RBP22.12■■□□□ 1.13
FAM3A-212ENST00000434658 TMEM87AQ8NBN3 555 aa22.12■■□□□ 1.13
FAM3A-212ENST00000434658 PPP1R9BQ96SB3 815 aa22.12■■□□□ 1.13
FAM3A-212ENST00000434658 HSP90B1P14625 803 aaKnown RBP22.11■■□□□ 1.13
FAM3A-212ENST00000434658 ALDH1B1P30837 517 aa22.11■■□□□ 1.13
FAM3A-212ENST00000434658 HOXA10P31260 410 aaPredicted RBP22.11■■□□□ 1.13
FAM3A-212ENST00000434658 RBM17Q96I25 401 aaKnown RBP22.11■■□□□ 1.13
FAM3A-212ENST00000434658 HMG20BQ9P0W2 317 aa22.11■■□□□ 1.13
FAM3A-212ENST00000434658 STX6O43752 255 aa22.1■■□□□ 1.13
FAM3A-212ENST00000434658 SYT1P21579 422 aa22.1■■□□□ 1.13
FAM3A-212ENST00000434658 LARP6Q9BRS8 491 aaKnown RBP22.1■■□□□ 1.13
FAM3A-212ENST00000434658 ZNF219Q9P2Y4 722 aaPredicted RBP22.1■■□□□ 1.13
FAM3A-212ENST00000434658 CDHR2Q9BYE9 1310 aa22.1■■□□□ 1.13
FAM3A-212ENST00000434658 DDX60Q8IY21 1712 aaKnown RBP22.1■■□□□ 1.13
FAM3A-212ENST00000434658 TSGA10IPQ3SY00 556 aa22.1■■□□□ 1.13
FAM3A-212ENST00000434658 LRSAM1Q6UWE0 723 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms