RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 USP17L1Q7RTZ2 530 aa27.8■■■□□ 2.04
RPUSD3-206ENST00000433535 BEGAINQ9BUH8 593 aa27.8■■■□□ 2.04
RPUSD3-206ENST00000433535 MAP2K2P36507 400 aa27.79■■■□□ 2.04
RPUSD3-206ENST00000433535 HUNKP57058 714 aa27.79■■■□□ 2.04
RPUSD3-206ENST00000433535 GMLQ99445 158 aa27.79■■■□□ 2.04
RPUSD3-206ENST00000433535 CSF1RP07333 972 aa27.78■■■□□ 2.04
RPUSD3-206ENST00000433535 KLRK1P26718 216 aa27.78■■■□□ 2.04
RPUSD3-206ENST00000433535 TXNRD3Q86VQ6 643 aa27.78■■■□□ 2.04
RPUSD3-206ENST00000433535 SULF1Q8IWU6 871 aa27.78■■■□□ 2.04
RPUSD3-206ENST00000433535 MPHOSPH8Q99549 860 aa27.78■■■□□ 2.04
RPUSD3-206ENST00000433535 MXD3Q9BW11 206 aa27.78■■■□□ 2.04
RPUSD3-206ENST00000433535 TSKSQ9UJT2 592 aa27.78■■■□□ 2.04
RPUSD3-206ENST00000433535 USP17L8P0C7I0 530 aa27.77■■■□□ 2.04
RPUSD3-206ENST00000433535 BEND3Q5T5X7 828 aa27.77■■■□□ 2.04
RPUSD3-206ENST00000433535 FBXW7Q969H0 707 aa27.77■■■□□ 2.04
RPUSD3-206ENST00000433535 GBA2Q9HCG7 927 aaPredicted RBP27.77■■■□□ 2.04
RPUSD3-206ENST00000433535 A0A1B0GUL6 1792 aa27.77■■■□□ 2.04
RPUSD3-206ENST00000433535 SCARF1Q14162 830 aa27.76■■■□□ 2.03
RPUSD3-206ENST00000433535 ANGEL2Q5VTE6 544 aaKnown RBP27.76■■■□□ 2.03
RPUSD3-206ENST00000433535 MYOZ2Q9NPC6 264 aa27.76■■■□□ 2.03
RPUSD3-206ENST00000433535 LEMD3Q9Y2U8 911 aa27.76■■■□□ 2.03
RPUSD3-206ENST00000433535 ZNF804BA4D1E1 1349 aa27.75■■■□□ 2.03
RPUSD3-206ENST00000433535 ANKRD18BA2A2Z9 1011 aa27.74■■■□□ 2.03
RPUSD3-206ENST00000433535 FOXO4P98177 505 aa27.74■■■□□ 2.03
RPUSD3-206ENST00000433535 CHRNDQ07001 517 aa27.74■■■□□ 2.03
RPUSD3-206ENST00000433535 DACT2Q5SW24 774 aa27.74■■■□□ 2.03
RPUSD3-206ENST00000433535 ZIC5Q96T25 663 aa27.74■■■□□ 2.03
RPUSD3-206ENST00000433535 ANKRD2Q9GZV1 360 aa27.74■■■□□ 2.03
RPUSD3-206ENST00000433535 COA1Q9GZY4 146 aa27.74■■■□□ 2.03
RPUSD3-206ENST00000433535 CHMP3Q9Y3E7 222 aa27.74■■■□□ 2.03
RPUSD3-206ENST00000433535 C2orf69Q8N8R5 385 aa27.73■■■□□ 2.03
RPUSD3-206ENST00000433535 CDCA5Q96FF9 252 aa27.73■■■□□ 2.03
RPUSD3-206ENST00000433535 BRPF1P55201 1214 aaPredicted RBP27.72■■■□□ 2.03
RPUSD3-206ENST00000433535 SCAF8Q9UPN6 1271 aaKnown RBP27.72■■■□□ 2.03
RPUSD3-206ENST00000433535 ZNF521Q96K83 1311 aa27.71■■■□□ 2.03
RPUSD3-206ENST00000433535 KCNJ4P48050 445 aa27.71■■■□□ 2.03
RPUSD3-206ENST00000433535 EPHA10Q5JZY3 1008 aa27.71■■■□□ 2.03
RPUSD3-206ENST00000433535 RGMBQ6NW40 437 aa27.71■■■□□ 2.03
RPUSD3-206ENST00000433535 SNAP23O00161 211 aa27.7■■■□□ 2.02
RPUSD3-206ENST00000433535 NOGQ13253 232 aa27.7■■■□□ 2.02
RPUSD3-206ENST00000433535 IFIT5Q13325 482 aaKnown RBP27.7■■■□□ 2.02
RPUSD3-206ENST00000433535 STRIP1Q5VSL9 837 aa27.7■■■□□ 2.02
RPUSD3-206ENST00000433535 GRM8O00222 908 aa27.69■■■□□ 2.02
RPUSD3-206ENST00000433535 TAF5LO75529 589 aa27.69■■■□□ 2.02
RPUSD3-206ENST00000433535 SLC4A10Q6U841 1118 aa27.69■■■□□ 2.02
RPUSD3-206ENST00000433535 HELBQ8NG08 1087 aaPredicted RBP27.69■■■□□ 2.02
RPUSD3-206ENST00000433535 MYO3BQ8WXR4 1341 aa27.68■■■□□ 2.02
RPUSD3-206ENST00000433535 FAM155AB1AL88 458 aaPredicted RBP27.68■■■□□ 2.02
RPUSD3-206ENST00000433535 NBPF9Q3BBW0 867 aa27.68■■■□□ 2.02
RPUSD3-206ENST00000433535 LMBR1LQ6UX01 489 aa27.68■■■□□ 2.02
RPUSD3-206ENST00000433535 PITPNM2Q9BZ72 1349 aa27.67■■■□□ 2.02
RPUSD3-206ENST00000433535 OGFOD1Q8N543 542 aa27.67■■■□□ 2.02
RPUSD3-206ENST00000433535 PAPPA2Q9BXP8 1791 aa27.67■■■□□ 2.02
RPUSD3-206ENST00000433535 ZNF157P51786 506 aaPredicted RBP27.66■■■□□ 2.02
RPUSD3-206ENST00000433535 TTLL5Q6EMB2 1281 aa27.66■■■□□ 2.02
RPUSD3-206ENST00000433535 ZNF594Q96JF6 807 aaPredicted RBP27.66■■■□□ 2.02
RPUSD3-206ENST00000433535 C9orf78Q9NZ63 289 aaPredicted RBP27.66■■■□□ 2.02
RPUSD3-206ENST00000433535 IRS2Q9Y4H2 1338 aa27.66■■■□□ 2.02
RPUSD3-206ENST00000433535 CA12O43570 354 aa27.65■■■□□ 2.02
RPUSD3-206ENST00000433535 SASH1O94885 1247 aa27.65■■■□□ 2.02
RPUSD3-206ENST00000433535 GTF2IP78347 998 aa27.65■■■□□ 2.02
RPUSD3-206ENST00000433535 KIAA0825Q8IV33 1275 aa27.65■■■□□ 2.02
RPUSD3-206ENST00000433535 ALDH1L1O75891 902 aa27.64■■■□□ 2.02
RPUSD3-206ENST00000433535 SRCIN1Q9C0H9 1055 aa27.64■■■□□ 2.02
RPUSD3-206ENST00000433535 WNT10BO00744 389 aa27.63■■■□□ 2.01
RPUSD3-206ENST00000433535 PRAMEF18Q5VWM3 479 aa27.63■■■□□ 2.01
RPUSD3-206ENST00000433535 CCDC102AQ96A19 550 aa27.63■■■□□ 2.01
RPUSD3-206ENST00000433535 CD209Q9NNX6 404 aa27.63■■■□□ 2.01
RPUSD3-206ENST00000433535 SLC10A3P09131 477 aa27.62■■■□□ 2.01
RPUSD3-206ENST00000433535 CCDC57Q2TAC2 916 aa27.62■■■□□ 2.01
RPUSD3-206ENST00000433535 TAF7LQ5H9L4 462 aa27.62■■■□□ 2.01
RPUSD3-206ENST00000433535 ABHD8Q96I13 439 aa27.62■■■□□ 2.01
RPUSD3-206ENST00000433535 CASP8AP2Q9UKL3 1982 aa27.61■■■□□ 2.01
RPUSD3-206ENST00000433535 KIF23Q02241 960 aaPredicted RBP27.61■■■□□ 2.01
RPUSD3-206ENST00000433535 MOB2Q70IA6 237 aa27.61■■■□□ 2.01
RPUSD3-206ENST00000433535 SUCLG2Q96I99 432 aa27.61■■■□□ 2.01
RPUSD3-206ENST00000433535 PLIN1O60240 522 aa27.6■■■□□ 2.01
RPUSD3-206ENST00000433535 LDHAL6AQ6ZMR3 332 aa27.6■■■□□ 2.01
RPUSD3-206ENST00000433535 C15orf52Q6ZUT6 534 aaKnown RBP27.6■■■□□ 2.01
RPUSD3-206ENST00000433535 CNNM1Q9NRU3 951 aa27.6■■■□□ 2.01
RPUSD3-206ENST00000433535 RASAL3Q86YV0 1011 aa27.59■■■□□ 2.01
RPUSD3-206ENST00000433535 CERS5Q8N5B7 392 aa27.59■■■□□ 2.01
RPUSD3-206ENST00000433535 HDAC9Q9UKV0 1011 aa27.59■■■□□ 2.01
RPUSD3-206ENST00000433535 NBPF7P0C2Y1 421 aaPredicted RBP27.58■■■□□ 2.01
RPUSD3-206ENST00000433535 FKBP1BP68106 108 aa27.58■■■□□ 2.01
RPUSD3-206ENST00000433535 ZNF804AQ7Z570 1209 aa27.58■■■□□ 2.01
RPUSD3-206ENST00000433535 MRPL50Q8N5N7 158 aaKnown RBP27.58■■■□□ 2.01
RPUSD3-206ENST00000433535 KAZALD1Q96I82 304 aa27.58■■■□□ 2.01
RPUSD3-206ENST00000433535 JAG2Q9Y219 1238 aa27.57■■■□□ 2
RPUSD3-206ENST00000433535 AKAP11Q9UKA4 1901 aa27.55■■■□□ 2
RPUSD3-206ENST00000433535 E9PSI1 815 aa27.55■■■□□ 2
RPUSD3-206ENST00000433535 IL1R1P14778 569 aa27.55■■■□□ 2
RPUSD3-206ENST00000433535 ZBED3Q96IU2 234 aaPredicted RBP27.55■■■□□ 2
RPUSD3-206ENST00000433535 F8W031 263 aaPredicted RBP27.54■■■□□ 2
RPUSD3-206ENST00000433535 UBE2Q2LH0YL09 131 aa27.54■■■□□ 2
RPUSD3-206ENST00000433535 UTYO14607 1347 aa27.54■■■□□ 2
RPUSD3-206ENST00000433535 MMP14P50281 582 aa27.54■■■□□ 2
RPUSD3-206ENST00000433535 TTLL12Q14166 644 aaPredicted RBP27.54■■■□□ 2
RPUSD3-206ENST00000433535 SSH1Q8WYL5 1049 aa27.54■■■□□ 2
RPUSD3-206ENST00000433535 PUS3Q9BZE2 481 aaKnown RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms