RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 VPS37DQ86XT2 251 aa16.65■□□□□ 0.26
RTN1-204ENST00000432103 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
RTN1-204ENST00000432103 MTFR1LQ9H019 292 aa16.65■□□□□ 0.26
RTN1-204ENST00000432103 PPEF1O14829 653 aaPredicted RBP16.64■□□□□ 0.25
RTN1-204ENST00000432103 C2CD5Q86YS7 1000 aa16.64■□□□□ 0.25
RTN1-204ENST00000432103 SP8Q8IXZ3 490 aa16.64■□□□□ 0.25
RTN1-204ENST00000432103 ZNF804BA4D1E1 1349 aa16.64■□□□□ 0.25
RTN1-204ENST00000432103 ATP2B4P23634 1241 aa16.64■□□□□ 0.25
RTN1-204ENST00000432103 KBTBD3Q8NAB2 608 aa16.64■□□□□ 0.25
RTN1-204ENST00000432103 CNKSR1Q969H4 720 aa16.64■□□□□ 0.25
RTN1-204ENST00000432103 ESYT1Q9BSJ8 1104 aa16.64■□□□□ 0.25
RTN1-204ENST00000432103 SEC24BO95487 1268 aa16.63■□□□□ 0.25
RTN1-204ENST00000432103 FKBP4Q02790 459 aaKnown RBP eCLIP16.63■□□□□ 0.25
RTN1-204ENST00000432103 AK9Q5TCS8 1911 aa16.63■□□□□ 0.25
RTN1-204ENST00000432103 RAD50Q92878 1312 aa16.63■□□□□ 0.25
RTN1-204ENST00000432103 SEMA3EO15041 775 aa16.63■□□□□ 0.25
RTN1-204ENST00000432103 ZSCAN25Q6NSZ9 544 aa16.63■□□□□ 0.25
RTN1-204ENST00000432103 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
RTN1-204ENST00000432103 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.63■□□□□ 0.25
RTN1-204ENST00000432103 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
RTN1-204ENST00000432103 ATP6V0A2Q9Y487 856 aa16.63■□□□□ 0.25
RTN1-204ENST00000432103 GOLIM4O00461 696 aa16.62■□□□□ 0.25
RTN1-204ENST00000432103 ZBTB22O15209 634 aa16.62■□□□□ 0.25
RTN1-204ENST00000432103 ZFYP08048 801 aaPredicted RBP16.62■□□□□ 0.25
RTN1-204ENST00000432103 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
RTN1-204ENST00000432103 C22orf23Q9BZE7 217 aa16.62■□□□□ 0.25
RTN1-204ENST00000432103 PHKA1P46020 1223 aa16.61■□□□□ 0.25
RTN1-204ENST00000432103 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.25
RTN1-204ENST00000432103 GGA1Q9UJY5 639 aa16.61■□□□□ 0.25
RTN1-204ENST00000432103 C15orf52Q6ZUT6 534 aaKnown RBP16.61■□□□□ 0.25
RTN1-204ENST00000432103 TBC1D32Q96NH3 1257 aa16.61■□□□□ 0.25
RTN1-204ENST00000432103 PDGFDQ9GZP0 370 aaPredicted RBP16.61■□□□□ 0.25
RTN1-204ENST00000432103 NSFL1CQ9UNZ2 370 aaKnown RBP16.61■□□□□ 0.25
RTN1-204ENST00000432103 COL4A1P02462 1669 aa16.61■□□□□ 0.25
RTN1-204ENST00000432103 C10orf71Q711Q0 1435 aa16.6■□□□□ 0.25
RTN1-204ENST00000432103 MCAMP43121 646 aa16.6■□□□□ 0.25
RTN1-204ENST00000432103 SPATA5Q8NB90 893 aa16.6■□□□□ 0.25
RTN1-204ENST00000432103 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
RTN1-204ENST00000432103 A0A1B0GUL6 1792 aa16.6■□□□□ 0.25
RTN1-204ENST00000432103 TAF1P21675 1872 aa16.6■□□□□ 0.25
RTN1-204ENST00000432103 MCCP23508 829 aa16.6■□□□□ 0.25
RTN1-204ENST00000432103 HIBADHP31937 336 aaKnown RBP16.6■□□□□ 0.25
RTN1-204ENST00000432103 BCAMP50895 628 aa16.6■□□□□ 0.25
RTN1-204ENST00000432103 R3HDM1Q15032 1099 aaKnown RBP16.6■□□□□ 0.25
RTN1-204ENST00000432103 GRIPAP1Q4V328 841 aa16.6■□□□□ 0.25
RTN1-204ENST00000432103 CWC27Q6UX04 472 aaKnown RBP16.6■□□□□ 0.25
RTN1-204ENST00000432103 SGSM2O43147 1006 aa16.59■□□□□ 0.25
RTN1-204ENST00000432103 IGSF3O75054 1194 aa16.59■□□□□ 0.25
RTN1-204ENST00000432103 ZAP70P43403 619 aa16.59■□□□□ 0.25
RTN1-204ENST00000432103 CC2D2BQ6DHV5 1058 aa16.59■□□□□ 0.25
RTN1-204ENST00000432103 ZNF804AQ7Z570 1209 aa16.59■□□□□ 0.25
RTN1-204ENST00000432103 PDS5AQ29RF7 1337 aaKnown RBP16.59■□□□□ 0.25
RTN1-204ENST00000432103 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.25
RTN1-204ENST00000432103 RBM25P49756 843 aaKnown RBP16.58■□□□□ 0.25
RTN1-204ENST00000432103 GPSM2P81274 684 aa16.58■□□□□ 0.25
RTN1-204ENST00000432103 FBXO33Q7Z6M2 555 aa16.58■□□□□ 0.25
RTN1-204ENST00000432103 FAM84BQ96KN1 310 aaPredicted RBP16.58■□□□□ 0.25
RTN1-204ENST00000432103 UFL1O94874 794 aa16.58■□□□□ 0.24
RTN1-204ENST00000432103 ZBTB7AO95365 584 aa16.58■□□□□ 0.24
RTN1-204ENST00000432103 ANO2Q9NQ90 1003 aa16.58■□□□□ 0.24
RTN1-204ENST00000432103 SNRKQ9NRH2 765 aa16.58■□□□□ 0.24
RTN1-204ENST00000432103 HELLSQ9NRZ9 838 aa16.58■□□□□ 0.24
RTN1-204ENST00000432103 HMG20BQ9P0W2 317 aa16.58■□□□□ 0.24
RTN1-204ENST00000432103 SNAP23O00161 211 aa16.57■□□□□ 0.24
RTN1-204ENST00000432103 RNF113AO15541 343 aaKnown RBP16.57■□□□□ 0.24
RTN1-204ENST00000432103 GYG1P46976 350 aa16.57■□□□□ 0.24
RTN1-204ENST00000432103 TGFB2P61812 414 aa16.57■□□□□ 0.24
RTN1-204ENST00000432103 RASGRF1Q13972 1273 aa16.57■□□□□ 0.24
RTN1-204ENST00000432103 WASHC4Q2M389 1173 aa16.57■□□□□ 0.24
RTN1-204ENST00000432103 TMED8Q6PL24 325 aaPredicted RBP16.57■□□□□ 0.24
RTN1-204ENST00000432103 MPNDQ8N594 471 aa16.57■□□□□ 0.24
RTN1-204ENST00000432103 EDC3Q96F86 508 aaKnown RBP16.57■□□□□ 0.24
RTN1-204ENST00000432103 USP26Q9BXU7 913 aa16.57■□□□□ 0.24
RTN1-204ENST00000432103 MAP3K12Q12852 859 aa16.57■□□□□ 0.24
RTN1-204ENST00000432103 SCARF1Q14162 830 aa16.57■□□□□ 0.24
RTN1-204ENST00000432103 EYA3Q99504 573 aa16.57■□□□□ 0.24
RTN1-204ENST00000432103 LRRC37AA6NMS7 1700 aa16.56■□□□□ 0.24
RTN1-204ENST00000432103 NMIQ13287 307 aaPredicted RBP16.56■□□□□ 0.24
RTN1-204ENST00000432103 MCMDC2Q4G0Z9 681 aa16.56■□□□□ 0.24
RTN1-204ENST00000432103 DPP8Q6V1X1 898 aaPredicted RBP16.56■□□□□ 0.24
RTN1-204ENST00000432103 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
RTN1-204ENST00000432103 MED23Q9ULK4 1368 aa16.56■□□□□ 0.24
RTN1-204ENST00000432103 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
RTN1-204ENST00000432103 C6orf229H3BNL8 230 aa16.55■□□□□ 0.24
RTN1-204ENST00000432103 CYP2E1P05181 493 aaPredicted RBP16.55■□□□□ 0.24
RTN1-204ENST00000432103 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
RTN1-204ENST00000432103 ZGPATQ8N5A5 531 aaKnown RBP16.55■□□□□ 0.24
RTN1-204ENST00000432103 TBC1D16Q8TBP0 767 aa16.55■□□□□ 0.24
RTN1-204ENST00000432103 IL27Q8NEV9 243 aa16.55■□□□□ 0.24
RTN1-204ENST00000432103 ANTXR1Q9H6X2 564 aa16.55■□□□□ 0.24
RTN1-204ENST00000432103 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
RTN1-204ENST00000432103 CHRNA5P30532 468 aa16.54■□□□□ 0.24
RTN1-204ENST00000432103 TTLL6Q8N841 843 aa16.54■□□□□ 0.24
RTN1-204ENST00000432103 IDH1O75874 414 aaKnown RBP16.54■□□□□ 0.24
RTN1-204ENST00000432103 UBE3CQ15386 1083 aa16.54■□□□□ 0.24
RTN1-204ENST00000432103 SOGA3Q5TF21 947 aa16.54■□□□□ 0.24
RTN1-204ENST00000432103 SUPT20HQ8NEM7 779 aa16.54■□□□□ 0.24
RTN1-204ENST00000432103 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
RTN1-204ENST00000432103 SPTY2D1Q68D10 685 aaPredicted RBP16.53■□□□□ 0.24
RTN1-204ENST00000432103 PI16Q6UXB8 463 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms