RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 RIMBP2O15034 1052 aa17.83■□□□□ 0.44
CSTF3-202ENST00000431742 SURF6O75683 361 aaKnown RBP17.83■□□□□ 0.44
CSTF3-202ENST00000431742 SASH1O94885 1247 aa17.83■□□□□ 0.44
CSTF3-202ENST00000431742 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.44
CSTF3-202ENST00000431742 PUM3Q15397 648 aaKnown RBP17.83■□□□□ 0.44
CSTF3-202ENST00000431742 NIM1KQ8IY84 436 aa17.83■□□□□ 0.44
CSTF3-202ENST00000431742 ZC3H12CQ9C0D7 883 aaKnown RBP17.83■□□□□ 0.44
CSTF3-202ENST00000431742 CEP126Q9P2H0 1117 aa17.83■□□□□ 0.44
CSTF3-202ENST00000431742 TFCP2Q12800 502 aa17.82■□□□□ 0.44
CSTF3-202ENST00000431742 JDP2Q8WYK2 163 aa17.82■□□□□ 0.44
CSTF3-202ENST00000431742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.82■□□□□ 0.44
CSTF3-202ENST00000431742 ZNF541Q9H0D2 1346 aa17.81■□□□□ 0.44
CSTF3-202ENST00000431742 YDJCA8MPS7 323 aa17.81■□□□□ 0.44
CSTF3-202ENST00000431742 ZNRF3Q9ULT6 936 aa17.81■□□□□ 0.44
CSTF3-202ENST00000431742 EXOC6BQ9Y2D4 811 aa17.81■□□□□ 0.44
CSTF3-202ENST00000431742 SCN4AP35499 1836 aa17.81■□□□□ 0.44
CSTF3-202ENST00000431742 ECE2O60344 883 aa17.8■□□□□ 0.44
CSTF3-202ENST00000431742 ATP2B3Q16720 1220 aa17.8■□□□□ 0.44
CSTF3-202ENST00000431742 LPIN2Q92539 896 aa17.8■□□□□ 0.44
CSTF3-202ENST00000431742 DBNDD1Q9H9R9 158 aa17.8■□□□□ 0.44
CSTF3-202ENST00000431742 OS9Q13438 667 aaPredicted RBP17.79■□□□□ 0.44
CSTF3-202ENST00000431742 DOK7Q18PE1 504 aa17.79■□□□□ 0.44
CSTF3-202ENST00000431742 HSP90AB4PQ58FF6 505 aa17.79■□□□□ 0.44
CSTF3-202ENST00000431742 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
CSTF3-202ENST00000431742 COA1Q9GZY4 146 aa17.79■□□□□ 0.44
CSTF3-202ENST00000431742 GPR108Q9NPR9 543 aa17.79■□□□□ 0.44
CSTF3-202ENST00000431742 AKAP11Q9UKA4 1901 aa17.78■□□□□ 0.44
CSTF3-202ENST00000431742 SLC5A1P13866 664 aa17.78■□□□□ 0.44
CSTF3-202ENST00000431742 HDAC1Q13547 482 aaPredicted RBP17.78■□□□□ 0.44
CSTF3-202ENST00000431742 PODNQ7Z5L7 613 aa17.78■□□□□ 0.44
CSTF3-202ENST00000431742 FAM84BQ96KN1 310 aaPredicted RBP17.78■□□□□ 0.44
CSTF3-202ENST00000431742 DCTPP1Q9H773 170 aa17.78■□□□□ 0.44
CSTF3-202ENST00000431742 AKAP2Q9Y2D5 859 aa17.78■□□□□ 0.44
CSTF3-202ENST00000431742 A0A1B0GUL7 405 aa17.77■□□□□ 0.44
CSTF3-202ENST00000431742 RAB11FIP3O75154 756 aa17.77■□□□□ 0.44
CSTF3-202ENST00000431742 IFIT1P09914 478 aaKnown RBP17.77■□□□□ 0.44
CSTF3-202ENST00000431742 IL1R1P14778 569 aa17.77■□□□□ 0.44
CSTF3-202ENST00000431742 GYG1P46976 350 aa17.77■□□□□ 0.44
CSTF3-202ENST00000431742 CXCL9Q07325 125 aa17.77■□□□□ 0.44
CSTF3-202ENST00000431742 ZNF804AQ7Z570 1209 aa17.77■□□□□ 0.44
CSTF3-202ENST00000431742 FBXO33Q7Z6M2 555 aa17.77■□□□□ 0.44
CSTF3-202ENST00000431742 CD209Q9NNX6 404 aa17.77■□□□□ 0.44
CSTF3-202ENST00000431742 GLTPD2A6NH11 291 aa17.76■□□□□ 0.43
CSTF3-202ENST00000431742 YY1P25490 414 aa17.76■□□□□ 0.43
CSTF3-202ENST00000431742 EIF6P56537 245 aaKnown RBP17.76■□□□□ 0.43
CSTF3-202ENST00000431742 TNNI3KQ59H18 835 aa17.76■□□□□ 0.43
CSTF3-202ENST00000431742 RHPN1Q8TCX5 695 aa17.76■□□□□ 0.43
CSTF3-202ENST00000431742 FPGT-TNNI3KV9GXZ4 949 aa17.76■□□□□ 0.43
CSTF3-202ENST00000431742 ZBTB22O15209 634 aa17.75■□□□□ 0.43
CSTF3-202ENST00000431742 ADORA1P30542 326 aa17.75■□□□□ 0.43
CSTF3-202ENST00000431742 HIBADHP31937 336 aaKnown RBP17.75■□□□□ 0.43
CSTF3-202ENST00000431742 TIMM10P62072 90 aa17.75■□□□□ 0.43
CSTF3-202ENST00000431742 GPC2Q8N158 579 aa17.75■□□□□ 0.43
CSTF3-202ENST00000431742 TDRD7Q8NHU6 1098 aaKnown RBP17.75■□□□□ 0.43
CSTF3-202ENST00000431742 KIF1BPQ96EK5 621 aa17.75■□□□□ 0.43
CSTF3-202ENST00000431742 KCNQ5Q9NR82 932 aa17.75■□□□□ 0.43
CSTF3-202ENST00000431742 COL1A1P02452 1464 aaPredicted RBP17.75■□□□□ 0.43
CSTF3-202ENST00000431742 G3V3G9 751 aa17.74■□□□□ 0.43
CSTF3-202ENST00000431742 RAD17O75943 681 aa17.74■□□□□ 0.43
CSTF3-202ENST00000431742 DCAF8Q5TAQ9 597 aa17.74■□□□□ 0.43
CSTF3-202ENST00000431742 CIAPIN1Q6FI81 312 aa17.74■□□□□ 0.43
CSTF3-202ENST00000431742 XAGE2Q96GT9 111 aa17.74■□□□□ 0.43
CSTF3-202ENST00000431742 DDNO94850 711 aaPredicted RBP17.73■□□□□ 0.43
CSTF3-202ENST00000431742 BCAMP50895 628 aa17.73■□□□□ 0.43
CSTF3-202ENST00000431742 CAVIN4Q5BKX8 364 aa17.73■□□□□ 0.43
CSTF3-202ENST00000431742 DPY19L2Q6NUT2 758 aa17.73■□□□□ 0.43
CSTF3-202ENST00000431742 EAF2Q96CJ1 260 aaPredicted RBP17.73■□□□□ 0.43
CSTF3-202ENST00000431742 L3MBTL3Q96JM7 780 aaPredicted RBP17.73■□□□□ 0.43
CSTF3-202ENST00000431742 FAM205AQ6ZU69 1335 aa17.72■□□□□ 0.43
CSTF3-202ENST00000431742 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
CSTF3-202ENST00000431742 MYO5AQ9Y4I1 1855 aaKnown RBP17.72■□□□□ 0.43
CSTF3-202ENST00000431742 PSMD14O00487 310 aa17.72■□□□□ 0.43
CSTF3-202ENST00000431742 VIL1P09327 827 aaKnown RBP17.72■□□□□ 0.43
CSTF3-202ENST00000431742 TNIP1Q15025 636 aa17.72■□□□□ 0.43
CSTF3-202ENST00000431742 IL1RAPL2Q9NP60 686 aa17.72■□□□□ 0.43
CSTF3-202ENST00000431742 DBNLQ9UJU6 430 aaKnown RBP17.72■□□□□ 0.43
CSTF3-202ENST00000431742 ADAMTSL1Q8N6G6 1762 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 USP17L3A6NCW0 530 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 USP17L4A6NCW7 530 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 APBB1O00213 710 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 PHKA1P46020 1223 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 DACT2Q5SW24 774 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 STRIP1Q5VSL9 837 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 CCDC102BQ68D86 513 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 USP17L1Q7RTZ2 530 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 VPS37DQ86XT2 251 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 NEUROD6Q96NK8 337 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 DBNDD2Q9BQY9 259 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 LRRCC1Q9C099 1032 aa17.71■□□□□ 0.43
CSTF3-202ENST00000431742 ECM29Q5VYK3 1845 aa17.7■□□□□ 0.42
CSTF3-202ENST00000431742 DOCK2Q92608 1830 aa17.7■□□□□ 0.42
CSTF3-202ENST00000431742 IGHDP01880 384 aa17.7■□□□□ 0.42
CSTF3-202ENST00000431742 SMC5Q8IY18 1101 aa17.7■□□□□ 0.42
CSTF3-202ENST00000431742 GCC1Q96CN9 775 aa17.7■□□□□ 0.42
CSTF3-202ENST00000431742 RWDD1Q9H446 243 aaPredicted RBP17.7■□□□□ 0.42
CSTF3-202ENST00000431742 TLR7Q9NYK1 1049 aaKnown RBP17.7■□□□□ 0.42
CSTF3-202ENST00000431742 GJA3Q9Y6H8 435 aa17.7■□□□□ 0.42
CSTF3-202ENST00000431742 MAST2Q6P0Q8 1798 aa17.7■□□□□ 0.42
CSTF3-202ENST00000431742 POTECB2RU33 542 aa17.69■□□□□ 0.42
CSTF3-202ENST00000431742 SEMA3EO15041 775 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms