RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 METTL22Q9BUU2 404 aaPredicted RBP4.48□□□□□ -1.69
CDC40-204ENST00000431461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.48□□□□□ -1.69
CDC40-204ENST00000431461 BSDC1Q9NW68 430 aaPredicted RBP4.48□□□□□ -1.69
CDC40-204ENST00000431461 TM4SF5O14894 197 aa4.47□□□□□ -1.69
CDC40-204ENST00000431461 DDX3YO15523 660 aaKnown RBP4.47□□□□□ -1.69
CDC40-204ENST00000431461 MMP20O60882 483 aa4.47□□□□□ -1.69
CDC40-204ENST00000431461 XYLBO75191 536 aa4.47□□□□□ -1.69
CDC40-204ENST00000431461 FARP2O94887 1054 aaPredicted RBP4.47□□□□□ -1.69
CDC40-204ENST00000431461 BMP3P12645 472 aa4.47□□□□□ -1.69
CDC40-204ENST00000431461 PKN1Q16512 942 aa4.47□□□□□ -1.69
CDC40-204ENST00000431461 DUOXA2Q1HG44 320 aa4.47□□□□□ -1.69
CDC40-204ENST00000431461 FNBP4Q8N3X1 1017 aaPredicted RBP4.47□□□□□ -1.69
CDC40-204ENST00000431461 COL26A1Q96A83 441 aa4.47□□□□□ -1.69
CDC40-204ENST00000431461 MFSD14AQ96MC6 490 aa4.47□□□□□ -1.69
CDC40-204ENST00000431461 JAG2Q9Y219 1238 aa4.47□□□□□ -1.69
CDC40-204ENST00000431461 ATP11AP98196 1134 aa4.46□□□□□ -1.7
CDC40-204ENST00000431461 FAM117BQ6P1L5 589 aa4.46□□□□□ -1.7
CDC40-204ENST00000431461 BHLHE22Q8NFJ8 381 aaPredicted RBP4.46□□□□□ -1.7
CDC40-204ENST00000431461 UBASH3BQ8TF42 649 aa4.46□□□□□ -1.7
CDC40-204ENST00000431461 GLMNQ92990 594 aa4.46□□□□□ -1.7
CDC40-204ENST00000431461 ARXQ96QS3 562 aa4.46□□□□□ -1.7
CDC40-204ENST00000431461 OSBPL1AQ9BXW6 950 aa4.46□□□□□ -1.7
CDC40-204ENST00000431461 PPP1R12CQ9BZL4 782 aa4.46□□□□□ -1.7
CDC40-204ENST00000431461 VRTNQ9H8Y1 702 aa4.46□□□□□ -1.7
CDC40-204ENST00000431461 LRFN2Q9ULH4 789 aa4.46□□□□□ -1.7
CDC40-204ENST00000431461 USP17L15C9J2P7 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L10C9JJH3 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L13C9JLJ4 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L12C9JPN9 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L11C9JVI0 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L21D6R901 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L18D6R9N7 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L22D6RA61 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L17D6RBQ6 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L19D6RCP7 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L20D6RJB6 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 BUD31P41223 144 aaPredicted RBP4.45□□□□□ -1.7
CDC40-204ENST00000431461 USP17L24Q0WX57 530 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 ZNF648Q5T619 568 aaPredicted RBP4.45□□□□□ -1.7
CDC40-204ENST00000431461 NFXL1Q6ZNB6 911 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 FBXL6Q8N531 539 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 WNT8BQ93098 351 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 VTI1AQ96AJ9 217 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 RNF208Q9H0X6 261 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 KCNMB2Q9Y691 235 aa4.45□□□□□ -1.7
CDC40-204ENST00000431461 MEGF11A6BM72 1044 aa4.44□□□□□ -1.7
CDC40-204ENST00000431461 FSCN2O14926 492 aa4.44□□□□□ -1.7
CDC40-204ENST00000431461 PAPLNO95428 1278 aa4.44□□□□□ -1.7
CDC40-204ENST00000431461 CDC27P30260 824 aa4.44□□□□□ -1.7
CDC40-204ENST00000431461 PREPP48147 710 aa4.44□□□□□ -1.7
CDC40-204ENST00000431461 ZNF124Q15973 351 aa4.44□□□□□ -1.7
CDC40-204ENST00000431461 CEP135Q66GS9 1140 aa4.44□□□□□ -1.7
CDC40-204ENST00000431461 TREML1Q86YW5 311 aa4.44□□□□□ -1.7
CDC40-204ENST00000431461 SMNDC1O75940 238 aaKnown RBP eCLIP4.43□□□□□ -1.7
CDC40-204ENST00000431461 F13BP05160 661 aa4.43□□□□□ -1.7
CDC40-204ENST00000431461 COL19A1Q14993 1142 aa4.43□□□□□ -1.7
CDC40-204ENST00000431461 ADAMTSL4Q6UY14 1074 aa4.43□□□□□ -1.7
CDC40-204ENST00000431461 NLRP13Q86W25 1043 aa4.43□□□□□ -1.7
CDC40-204ENST00000431461 FOXD4L4Q8WXT5 416 aaPredicted RBP4.43□□□□□ -1.7
CDC40-204ENST00000431461 OSGEPQ9NPF4 335 aa4.43□□□□□ -1.7
CDC40-204ENST00000431461 SH2B1Q9NRF2 756 aaPredicted RBP4.43□□□□□ -1.7
CDC40-204ENST00000431461 ADAM11O75078 769 aa4.42□□□□□ -1.7
CDC40-204ENST00000431461 MAP4P27816 1152 aaKnown RBP4.42□□□□□ -1.7
CDC40-204ENST00000431461 RXRBP28702 533 aa4.42□□□□□ -1.7
CDC40-204ENST00000431461 LMOD1P29536 600 aaPredicted RBP4.42□□□□□ -1.7
CDC40-204ENST00000431461 COX20Q5RI15 118 aa4.42□□□□□ -1.7
CDC40-204ENST00000431461 COL13A1Q5TAT6 717 aaPredicted RBP4.42□□□□□ -1.7
CDC40-204ENST00000431461 FDX2Q6P4F2 183 aa4.42□□□□□ -1.7
CDC40-204ENST00000431461 PROSER2Q86WR7 435 aaPredicted RBP4.42□□□□□ -1.7
CDC40-204ENST00000431461 KSR1Q8IVT5 923 aa4.42□□□□□ -1.7
CDC40-204ENST00000431461 SHISA5Q8N114 240 aa4.42□□□□□ -1.7
CDC40-204ENST00000431461 SPACA7Q96KW9 195 aa4.42□□□□□ -1.7
CDC40-204ENST00000431461 SLC38A3Q99624 504 aa4.42□□□□□ -1.7
CDC40-204ENST00000431461 FAM177BA6PVY3 158 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 CYP26A1O43174 497 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 EPHA1P21709 976 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 NLRP12P59046 1061 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 FLCNQ8NFG4 579 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 OR13H1Q8NG92 308 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 FAM200AQ8TCP9 573 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 TMEM40Q8WWA1 233 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 CLUAP1Q96AJ1 413 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 CALR3Q96L12 384 aaKnown RBP4.41□□□□□ -1.7
CDC40-204ENST00000431461 CSRNP1Q96S65 589 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 ADAM19Q9H013 955 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 RASSF4Q9H2L5 321 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 PAK6Q9NQU5 681 aaPredicted RBP4.41□□□□□ -1.7
CDC40-204ENST00000431461 SEC31BQ9NQW1 1179 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 RAPGEFL1Q9UHV5 662 aa4.41□□□□□ -1.7
CDC40-204ENST00000431461 GAS2O43903 313 aaKnown RBP4.4□□□□□ -1.71
CDC40-204ENST00000431461 BRD2P25440 801 aaKnown RBP4.4□□□□□ -1.71
CDC40-204ENST00000431461 PIP4K2BP78356 416 aa4.4□□□□□ -1.71
CDC40-204ENST00000431461 HYAL2Q12891 473 aa4.4□□□□□ -1.71
CDC40-204ENST00000431461 TRIP4Q15650 581 aaPredicted RBP4.4□□□□□ -1.71
CDC40-204ENST00000431461 SGO2Q562F6 1265 aa4.4□□□□□ -1.71
CDC40-204ENST00000431461 ATG4DQ86TL0 474 aaPredicted RBP4.4□□□□□ -1.71
CDC40-204ENST00000431461 ETFBKMTQ8IXQ9 262 aa4.4□□□□□ -1.71
CDC40-204ENST00000431461 KLHDC7BQ96G42 594 aa4.4□□□□□ -1.71
CDC40-204ENST00000431461 FAM13BQ9NYF5 915 aa4.4□□□□□ -1.71
CDC40-204ENST00000431461 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms