RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 PRAMEF18Q5VWM3 479 aa28.55■■■□□ 2.16
PTPRA-207ENST00000431048 FBXO46Q6PJ61 603 aaPredicted RBP28.55■■■□□ 2.16
PTPRA-207ENST00000431048 JARID2Q92833 1246 aaPredicted RBP28.55■■■□□ 2.16
PTPRA-207ENST00000431048 CHMP4AQ9BY43 222 aa28.55■■■□□ 2.16
PTPRA-207ENST00000431048 MINPP1Q9UNW1 487 aa28.55■■■□□ 2.16
PTPRA-207ENST00000431048 SCAF8Q9UPN6 1271 aaKnown RBP28.55■■■□□ 2.16
PTPRA-207ENST00000431048 WNT10BO00744 389 aa28.54■■■□□ 2.16
PTPRA-207ENST00000431048 STRIP1Q5VSL9 837 aa28.54■■■□□ 2.16
PTPRA-207ENST00000431048 IFT57Q9NWB7 429 aa28.54■■■□□ 2.16
PTPRA-207ENST00000431048 DDX58O95786 925 aaKnown RBP28.53■■■□□ 2.16
PTPRA-207ENST00000431048 SREBF2Q12772 1141 aa28.53■■■□□ 2.16
PTPRA-207ENST00000431048 TTLL12Q14166 644 aaPredicted RBP28.53■■■□□ 2.16
PTPRA-207ENST00000431048 WTIPA6NIX2 430 aaPredicted RBP28.52■■■□□ 2.16
PTPRA-207ENST00000431048 CTSWP56202 376 aa28.52■■■□□ 2.16
PTPRA-207ENST00000431048 GNAI1P63096 354 aa28.52■■■□□ 2.16
PTPRA-207ENST00000431048 TTLL11Q8NHH1 800 aa28.52■■■□□ 2.16
PTPRA-207ENST00000431048 COA1Q9GZY4 146 aa28.52■■■□□ 2.16
PTPRA-207ENST00000431048 ELL2O00472 640 aaPredicted RBP28.5■■■□□ 2.15
PTPRA-207ENST00000431048 FKTNO75072 461 aa28.5■■■□□ 2.15
PTPRA-207ENST00000431048 CCT4P50991 539 aaKnown RBP28.5■■■□□ 2.15
PTPRA-207ENST00000431048 CALD1Q05682 793 aaKnown RBP28.5■■■□□ 2.15
PTPRA-207ENST00000431048 ARMC9Q7Z3E5 817 aa28.5■■■□□ 2.15
PTPRA-207ENST00000431048 MXD3Q9BW11 206 aa28.5■■■□□ 2.15
PTPRA-207ENST00000431048 PTPN12Q05209 780 aaKnown RBP28.49■■■□□ 2.15
PTPRA-207ENST00000431048 LDLRAD1Q5T700 205 aa28.49■■■□□ 2.15
PTPRA-207ENST00000431048 LEMD3Q9Y2U8 911 aa28.49■■■□□ 2.15
PTPRA-207ENST00000431048 CCDC30Q5VVM6 783 aa28.48■■■□□ 2.15
PTPRA-207ENST00000431048 ALDH1A1P00352 501 aa28.47■■■□□ 2.15
PTPRA-207ENST00000431048 IGKV5-2P06315 115 aa28.47■■■□□ 2.15
PTPRA-207ENST00000431048 APOBEC3FQ8IUX4 373 aaKnown RBP28.47■■■□□ 2.15
PTPRA-207ENST00000431048 C8orf58Q8NAV2 365 aa28.47■■■□□ 2.15
PTPRA-207ENST00000431048 ZBED3Q96IU2 234 aaPredicted RBP28.47■■■□□ 2.15
PTPRA-207ENST00000431048 GREM2Q9H772 168 aa28.47■■■□□ 2.15
PTPRA-207ENST00000431048 MAP3K2Q9Y2U5 619 aa28.47■■■□□ 2.15
PTPRA-207ENST00000431048 KSR2Q6VAB6 950 aa28.46■■■□□ 2.15
PTPRA-207ENST00000431048 INHBEP58166 350 aa28.45■■■□□ 2.14
PTPRA-207ENST00000431048 MKRN3Q13064 507 aaKnown RBP28.45■■■□□ 2.14
PTPRA-207ENST00000431048 SPRYD7Q5W111 196 aa28.45■■■□□ 2.14
PTPRA-207ENST00000431048 TTLL5Q6EMB2 1281 aa28.45■■■□□ 2.14
PTPRA-207ENST00000431048 R3HDMLQ9H3Y0 253 aa28.45■■■□□ 2.14
PTPRA-207ENST00000431048 TXNRD3Q86VQ6 643 aa28.44■■■□□ 2.14
PTPRA-207ENST00000431048 ZNF646O15015 1829 aaPredicted RBP28.43■■■□□ 2.14
PTPRA-207ENST00000431048 SASH1O94885 1247 aa28.43■■■□□ 2.14
PTPRA-207ENST00000431048 FBXW7Q969H0 707 aa28.43■■■□□ 2.14
PTPRA-207ENST00000431048 GCC1Q96CN9 775 aa28.43■■■□□ 2.14
PTPRA-207ENST00000431048 PI4KAP2A4QPH2 592 aa28.42■■■□□ 2.14
PTPRA-207ENST00000431048 PI4KAP1Q8N8J0 262 aa28.42■■■□□ 2.14
PTPRA-207ENST00000431048 ANKRD2Q9GZV1 360 aa28.42■■■□□ 2.14
PTPRA-207ENST00000431048 MANSC4A6NHS7 340 aaPredicted RBP28.41■■■□□ 2.14
PTPRA-207ENST00000431048 H7C1W4 665 aa28.41■■■□□ 2.14
PTPRA-207ENST00000431048 APAF1O14727 1248 aa28.41■■■□□ 2.14
PTPRA-207ENST00000431048 IGHMBP2P38935 993 aaKnown RBP28.41■■■□□ 2.14
PTPRA-207ENST00000431048 NEXNQ0ZGT2 675 aa28.41■■■□□ 2.14
PTPRA-207ENST00000431048 MAP3K11Q16584 847 aa28.41■■■□□ 2.14
PTPRA-207ENST00000431048 ZNF804BA4D1E1 1349 aa28.41■■■□□ 2.14
PTPRA-207ENST00000431048 ANGEL1Q9UNK9 670 aaKnown RBP28.4■■■□□ 2.14
PTPRA-207ENST00000431048 COL1A1P02452 1464 aaPredicted RBP28.4■■■□□ 2.14
PTPRA-207ENST00000431048 UNCXA6NJT0 531 aa28.39■■■□□ 2.14
PTPRA-207ENST00000431048 PRKG1Q13976 671 aa28.39■■■□□ 2.14
PTPRA-207ENST00000431048 KIAA0825Q8IV33 1275 aa28.39■■■□□ 2.14
PTPRA-207ENST00000431048 SLC10A4Q96EP9 437 aa28.39■■■□□ 2.14
PTPRA-207ENST00000431048 PLA2G12BQ9BX93 195 aa28.39■■■□□ 2.14
PTPRA-207ENST00000431048 NEURL1BA8MQ27 555 aa28.38■■■□□ 2.13
PTPRA-207ENST00000431048 DDX10Q13206 875 aaKnown RBP28.38■■■□□ 2.13
PTPRA-207ENST00000431048 INTS3Q68E01 1043 aaKnown RBP28.38■■■□□ 2.13
PTPRA-207ENST00000431048 IFNL1Q8IU54 200 aa28.38■■■□□ 2.13
PTPRA-207ENST00000431048 MTMR14Q8NCE2 650 aa28.38■■■□□ 2.13
PTPRA-207ENST00000431048 DEFB129Q9H1M3 183 aa28.38■■■□□ 2.13
PTPRA-207ENST00000431048 ZBTB48P10074 688 aaPredicted RBP28.37■■■□□ 2.13
PTPRA-207ENST00000431048 GTF2IP78347 998 aa28.37■■■□□ 2.13
PTPRA-207ENST00000431048 MYH3P11055 1940 aa28.36■■■□□ 2.13
PTPRA-207ENST00000431048 CWF19L2Q2TBE0 894 aaKnown RBP28.36■■■□□ 2.13
PTPRA-207ENST00000431048 TSPYL6Q8N831 410 aa28.36■■■□□ 2.13
PTPRA-207ENST00000431048 PPP2R3BQ9Y5P8 575 aa28.36■■■□□ 2.13
PTPRA-207ENST00000431048 KLRK1P26718 216 aa28.35■■■□□ 2.13
PTPRA-207ENST00000431048 PPP1R12BO60237 982 aaPredicted RBP28.34■■■□□ 2.13
PTPRA-207ENST00000431048 CSF1RP07333 972 aa28.34■■■□□ 2.13
PTPRA-207ENST00000431048 ITGA6P23229 1130 aa28.34■■■□□ 2.13
PTPRA-207ENST00000431048 DLGAP5Q15398 846 aa28.34■■■□□ 2.13
PTPRA-207ENST00000431048 OTOP1Q7RTM1 612 aa28.34■■■□□ 2.13
PTPRA-207ENST00000431048 UBE3BQ7Z3V4 1068 aa28.34■■■□□ 2.13
PTPRA-207ENST00000431048 MPHOSPH8Q99549 860 aa28.34■■■□□ 2.13
PTPRA-207ENST00000431048 CD209Q9NNX6 404 aa28.34■■■□□ 2.13
PTPRA-207ENST00000431048 TRIM17Q9Y577 477 aa28.34■■■□□ 2.13
PTPRA-207ENST00000431048 C15orf52Q6ZUT6 534 aaKnown RBP28.33■■■□□ 2.13
PTPRA-207ENST00000431048 WNK4Q96J92 1243 aa28.33■■■□□ 2.13
PTPRA-207ENST00000431048 STK31Q9BXU1 1019 aa28.33■■■□□ 2.13
PTPRA-207ENST00000431048 HTTP42858 3142 aa28.32■■■□□ 2.12
PTPRA-207ENST00000431048 SPEF2Q9C093 1822 aa28.32■■■□□ 2.12
PTPRA-207ENST00000431048 SUPT20HL1Q3ZLR7 823 aa28.31■■■□□ 2.12
PTPRA-207ENST00000431048 FZD1Q9UP38 647 aa28.31■■■□□ 2.12
PTPRA-207ENST00000431048 IRS2Q9Y4H2 1338 aa28.3■■■□□ 2.12
PTPRA-207ENST00000431048 IGF2BP3O00425 579 aaKnown RBP eCLIP28.3■■■□□ 2.12
PTPRA-207ENST00000431048 CASP7P55210 303 aa28.3■■■□□ 2.12
PTPRA-207ENST00000431048 CHRNDQ07001 517 aa28.3■■■□□ 2.12
PTPRA-207ENST00000431048 GCKRQ14397 625 aa28.3■■■□□ 2.12
PTPRA-207ENST00000431048 CERS5Q8N5B7 392 aa28.3■■■□□ 2.12
PTPRA-207ENST00000431048 ERO1AQ96HE7 468 aa28.3■■■□□ 2.12
PTPRA-207ENST00000431048 KCNJ4P48050 445 aa28.29■■■□□ 2.12
PTPRA-207ENST00000431048 FKBP1AP62942 108 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms