RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 ADRA2BP18089 450 aa16.12■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 GNL2Q13823 731 aaKnown RBP16.12■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 NBPF6Q5VWK0 638 aa16.12■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 EP400NLQ6ZTU2 488 aa16.12■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 CNPY4Q8N129 248 aa16.12■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 NBPF4Q96M43 638 aa16.12■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 LMTK3Q96Q04 1460 aa16.12■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 FAM83GA6ND36 823 aa16.12■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 HSP90AB3PQ58FF7 597 aa16.12■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 CCAR1Q8IX12 1150 aaKnown RBP16.12■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 IFIT2P09913 472 aaKnown RBP16.11■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 PRPF40BQ6NWY9 871 aaKnown RBP16.11■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 CNNM3Q8NE01 707 aa16.11■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 SSH3Q8TE77 659 aa16.11■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 ACBD3Q9H3P7 528 aa16.11■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 GOLPH3LQ9H4A5 285 aa16.11■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 RAI14Q9P0K7 980 aa16.11■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 SETD1BQ9UPS6 1966 aaKnown RBP16.11■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 IKBKBO14920 756 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 MYO1BO43795 1136 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 ERLIN2O94905 339 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 TUBB2AQ13885 445 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 DDX11Q96FC9 970 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 TUBB2BQ9BVA1 445 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 GBP3Q9H0R5 595 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 SNRKQ9NRH2 765 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 PPP2R2CQ9Y2T4 447 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 NPATQ14207 1427 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 ADD1P35611 737 aaKnown RBP16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 HSP90B2PQ58FF3 399 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 CWC27Q6UX04 472 aaKnown RBP16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 SRGAP1Q7Z6B7 1085 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 ANKZF1Q9H8Y5 726 aa16.1■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 PTH1RQ03431 593 aa16.09■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 VIPAS39Q9H9C1 493 aa16.09■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 ATXN2Q99700 1313 aaKnown RBP16.09■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 PPP1R12AO14974 1030 aaPredicted RBP16.09■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 CBFA2T2O43439 604 aa16.09■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 AARSP49588 968 aaKnown RBP eCLIP16.09■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 NBPF20Q3BBV1 942 aa16.09■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 TMEM139Q8IV31 216 aa16.09■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 KAT2BQ92831 832 aa16.09■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 WDR24Q96S15 920 aa16.09■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 CRB1P82279 1406 aa16.08■□□□□ 0.17
CSNK1A1P1-201ENST00000430593 KIF3CO14782 793 aa16.08■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 SHOX2O60902 331 aaPredicted RBP16.08■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 HNRNPH1P31943 449 aaKnown RBP16.08■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 CHMP4BP1P59074 171 aa16.08■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 MCM6Q14566 821 aa16.08■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 NCAPHQ15003 741 aa16.08■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 MICALL1Q8N3F8 863 aa16.08■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 GNG11P61952 73 aa16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 POLA2Q14181 598 aa16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 GRIPAP1Q4V328 841 aa16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 CREB3L3Q68CJ9 461 aa16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 KCNV1Q6PIU1 500 aa16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 CEP112Q8N8E3 955 aa16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 GLRX3O76003 335 aaKnown RBP16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 DDR1Q08345 913 aa16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 NAA16Q6N069 864 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 SLC4A10Q6U841 1118 aa16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 FMR1NBQ8N0W7 255 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 BICC1Q9H694 974 aaKnown RBP16.07■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 JCADQ9P266 1359 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 CUTAO60888 179 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 N4BP1O75113 896 aaKnown RBP16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 RPS6KB1P23443 525 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 CALRP27797 417 aaKnown RBP16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 MNAT1P51948 309 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 DCTN1Q14203 1278 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 NUTM1Q86Y26 1132 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 TBC1D22AQ8WUA7 517 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 DHX58Q96C10 678 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 RBM28Q9NW13 759 aaKnown RBP16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 KIAA1468Q9P260 1216 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 DLC1Q96QB1 1528 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 A0A1W2PQ27 194 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 A0A1W2PQ64 194 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 A0A1W2PQD8 194 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 F6X3S4 739 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 FANCCQ00597 558 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 TOB2Q14106 344 aaPredicted RBP16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 CASP8Q14790 479 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 DPCR1Q3MIW9 517 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 VSTM4Q8IW00 320 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 CTCFLQ8NI51 663 aaPredicted RBP16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 RHPN1Q8TCX5 695 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 BRF1Q92994 677 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 FAM204AQ9H8W3 233 aa16.06■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 NPHP4O75161 1426 aaPredicted RBP16.05■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 NEDD4P46934 1319 aa16.05■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 EXOC5O00471 708 aa16.05■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 HSPA2P54652 639 aa16.05■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 BLOC1S2Q6QNY1 142 aa16.05■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 G2E3Q7L622 706 aa16.05■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 IL1RAPL2Q9NP60 686 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms