RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 CWC25Q9NXE8 425 aaPredicted RBP8.45□□□□□ -1.06
SMC6-205ENST00000430591 SCN9AQ15858 1988 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 POTECB2RU33 542 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 DDNO94850 711 aaPredicted RBP8.44□□□□□ -1.06
SMC6-205ENST00000430591 FKBP4Q02790 459 aaKnown RBP eCLIP8.44□□□□□ -1.06
SMC6-205ENST00000430591 GCKRQ14397 625 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 AOC3Q16853 763 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 BEND3Q5T5X7 828 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 ADGRD1Q6QNK2 874 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 SLC4A10Q6U841 1118 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 CCDC191Q8NCU4 936 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 RNF166Q96A37 237 aaPredicted RBP8.44□□□□□ -1.06
SMC6-205ENST00000430591 ADAM33Q9BZ11 813 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 RRAGCQ9HB90 399 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 GPBP1L1Q9HC44 474 aaPredicted RBP8.44□□□□□ -1.06
SMC6-205ENST00000430591 TSHZ2Q9NRE2 1034 aa8.44□□□□□ -1.06
SMC6-205ENST00000430591 H7C1W4 665 aa8.43□□□□□ -1.06
SMC6-205ENST00000430591 SNAP23O00161 211 aa8.43□□□□□ -1.06
SMC6-205ENST00000430591 DDX58O95786 925 aaKnown RBP8.43□□□□□ -1.06
SMC6-205ENST00000430591 ALDH1B1P30837 517 aa8.43□□□□□ -1.06
SMC6-205ENST00000430591 GPSM2P81274 684 aa8.43□□□□□ -1.06
SMC6-205ENST00000430591 GRAPQ13588 217 aa8.43□□□□□ -1.06
SMC6-205ENST00000430591 SF3B3Q15393 1217 aaKnown RBP8.43□□□□□ -1.06
SMC6-205ENST00000430591 GRAPLQ8TC17 118 aaPredicted RBP8.43□□□□□ -1.06
SMC6-205ENST00000430591 GREM2Q9H772 168 aa8.43□□□□□ -1.06
SMC6-205ENST00000430591 PDZRN3Q9UPQ7 1066 aa8.43□□□□□ -1.06
SMC6-205ENST00000430591 PCDHGA10Q9Y5H3 936 aa8.43□□□□□ -1.06
SMC6-205ENST00000430591 LTBP3Q9NS15 1303 aa8.43□□□□□ -1.06
SMC6-205ENST00000430591 WDR90Q96KV7 1748 aa8.43□□□□□ -1.06
SMC6-205ENST00000430591 SHTN1A0MZ66 631 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 PDE8AO60658 829 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 BCAR3O75815 825 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 IARSP41252 1262 aaKnown RBP8.42□□□□□ -1.06
SMC6-205ENST00000430591 CTSWP56202 376 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 FOXO4P98177 505 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 FAM161AQ3B820 660 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 DDX46Q7L014 1031 aaKnown RBP8.42□□□□□ -1.06
SMC6-205ENST00000430591 TTLL11Q8NHH1 800 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 KAZALD1Q96I82 304 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 SUCLG2Q96I99 432 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 KCNQ5Q9NR82 932 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 SMC4Q9NTJ3 1288 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 POLLQ9UGP5 575 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 ATP6V0A2Q9Y487 856 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 RNF123Q5XPI4 1314 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 CDHR2Q9BYE9 1310 aa8.42□□□□□ -1.06
SMC6-205ENST00000430591 ZNF646O15015 1829 aaPredicted RBP8.42□□□□□ -1.06
SMC6-205ENST00000430591 HRO43593 1189 aa8.41□□□□□ -1.06
SMC6-205ENST00000430591 NBPF7P0C2Y1 421 aaPredicted RBP8.41□□□□□ -1.06
SMC6-205ENST00000430591 KLRK1P26718 216 aa8.41□□□□□ -1.06
SMC6-205ENST00000430591 RARSP54136 660 aaKnown RBP8.41□□□□□ -1.06
SMC6-205ENST00000430591 C1QTNF8P60827 252 aa8.41□□□□□ -1.06
SMC6-205ENST00000430591 HTRA3P83110 453 aa8.41□□□□□ -1.06
SMC6-205ENST00000430591 LINS1Q8NG48 757 aa8.41□□□□□ -1.06
SMC6-205ENST00000430591 ZDHHC16Q969W1 377 aa8.41□□□□□ -1.06
SMC6-205ENST00000430591 ZNF594Q96JF6 807 aaPredicted RBP8.41□□□□□ -1.06
SMC6-205ENST00000430591 GLTPD2A6NH11 291 aa8.4□□□□□ -1.06
SMC6-205ENST00000430591 YDJCA8MPS7 323 aa8.4□□□□□ -1.06
SMC6-205ENST00000430591 PPIP5K2O43314 1243 aa8.4□□□□□ -1.06
SMC6-205ENST00000430591 NEXNQ0ZGT2 675 aa8.4□□□□□ -1.06
SMC6-205ENST00000430591 E2F4Q16254 413 aa8.4□□□□□ -1.06
SMC6-205ENST00000430591 DPP8Q6V1X1 898 aaPredicted RBP8.4□□□□□ -1.06
SMC6-205ENST00000430591 SP8Q8IXZ3 490 aa8.4□□□□□ -1.06
SMC6-205ENST00000430591 RTKN2Q8IZC4 609 aa8.4□□□□□ -1.06
SMC6-205ENST00000430591 MPNDQ8N594 471 aa8.4□□□□□ -1.06
SMC6-205ENST00000430591 PSMD1Q99460 953 aa8.4□□□□□ -1.06
SMC6-205ENST00000430591 NOB1Q9ULX3 412 aaKnown RBP8.4□□□□□ -1.06
SMC6-205ENST00000430591 TK2O00142 265 aa8.39□□□□□ -1.07
SMC6-205ENST00000430591 RPS8P62241 208 aaKnown RBP8.39□□□□□ -1.07
SMC6-205ENST00000430591 FMR1Q06787 632 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMC6-205ENST00000430591 LMBR1LQ6UX01 489 aa8.39□□□□□ -1.07
SMC6-205ENST00000430591 TXNRD3Q86VQ6 643 aa8.39□□□□□ -1.07
SMC6-205ENST00000430591 LARGE2Q8N3Y3 721 aa8.39□□□□□ -1.07
SMC6-205ENST00000430591 HELBQ8NG08 1087 aaPredicted RBP8.39□□□□□ -1.07
SMC6-205ENST00000430591 RTFDC1Q9BY42 306 aaPredicted RBP8.39□□□□□ -1.07
SMC6-205ENST00000430591 DBNDD1Q9H9R9 158 aa8.39□□□□□ -1.07
SMC6-205ENST00000430591 NSFL1CQ9UNZ2 370 aaKnown RBP8.39□□□□□ -1.07
SMC6-205ENST00000430591 GJA3Q9Y6H8 435 aa8.39□□□□□ -1.07
SMC6-205ENST00000430591 ADAMTSL1Q8N6G6 1762 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 FZD9O00144 591 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 GRM8O00222 908 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 BBOX1O75936 387 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 RAD17O75943 681 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 CSF1RP07333 972 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 ITGA6P23229 1130 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 PTPREP23469 700 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 EPS15P42566 896 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 CCDC152Q4G0S7 254 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 DLK2Q6UY11 383 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 ANKRD44Q8N8A2 993 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 KLHDC4Q8TBB5 520 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 TBC1D16Q8TBP0 767 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 CLUAP1Q96AJ1 413 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 PUS3Q9BZE2 481 aaKnown RBP8.38□□□□□ -1.07
SMC6-205ENST00000430591 SRCIN1Q9C0H9 1055 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 USP44Q9H0E7 712 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 MINPP1Q9UNW1 487 aa8.38□□□□□ -1.07
SMC6-205ENST00000430591 RTL9Q8NET4 1388 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 KDM2BQ8NHM5 1336 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms