RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 LRRC2Q9BYS8 371 aa19.28■□□□□ 0.68
MBD4-203ENST00000429544 ATP6V1DQ9Y5K8 247 aa19.28■□□□□ 0.68
MBD4-203ENST00000429544 CICQ96RK0 1608 aaPredicted RBP19.28■□□□□ 0.68
MBD4-203ENST00000429544 HSP90B1P14625 803 aaKnown RBP19.28■□□□□ 0.68
MBD4-203ENST00000429544 WASHC4Q2M389 1173 aa19.28■□□□□ 0.68
MBD4-203ENST00000429544 TMEM87AQ8NBN3 555 aa19.28■□□□□ 0.68
MBD4-203ENST00000429544 ABCC12Q96J65 1359 aa19.27■□□□□ 0.68
MBD4-203ENST00000429544 HCLS1P14317 486 aaPredicted RBP19.27■□□□□ 0.68
MBD4-203ENST00000429544 LARP1BQ659C4 914 aaKnown RBP19.27■□□□□ 0.68
MBD4-203ENST00000429544 SYCE3A1L190 88 aa19.27■□□□□ 0.67
MBD4-203ENST00000429544 MCAMP43121 646 aa19.27■□□□□ 0.67
MBD4-203ENST00000429544 NASPP49321 788 aaPredicted RBP19.27■□□□□ 0.67
MBD4-203ENST00000429544 DDX60Q8IY21 1712 aaKnown RBP19.26■□□□□ 0.67
MBD4-203ENST00000429544 CAMTA2O94983 1202 aa19.26■□□□□ 0.67
MBD4-203ENST00000429544 ZFYP08048 801 aaPredicted RBP19.26■□□□□ 0.67
MBD4-203ENST00000429544 MYO5AQ9Y4I1 1855 aaKnown RBP19.26■□□□□ 0.67
MBD4-203ENST00000429544 FIBPO43427 364 aa19.26■□□□□ 0.67
MBD4-203ENST00000429544 KCNQ2O43526 872 aa19.26■□□□□ 0.67
MBD4-203ENST00000429544 TOM1O60784 492 aa19.26■□□□□ 0.67
MBD4-203ENST00000429544 BRF1Q92994 677 aa19.26■□□□□ 0.67
MBD4-203ENST00000429544 PDE8BO95263 885 aa19.25■□□□□ 0.67
MBD4-203ENST00000429544 HMGB1P09429 215 aaKnown RBP19.25■□□□□ 0.67
MBD4-203ENST00000429544 FGD1P98174 961 aa19.25■□□□□ 0.67
MBD4-203ENST00000429544 GTF3C6Q969F1 213 aa19.25■□□□□ 0.67
MBD4-203ENST00000429544 UTP14AQ9BVJ6 771 aaKnown RBP19.25■□□□□ 0.67
MBD4-203ENST00000429544 COL5A3P25940 1745 aaPredicted RBP19.25■□□□□ 0.67
MBD4-203ENST00000429544 ARAP2Q8WZ64 1704 aa19.25■□□□□ 0.67
MBD4-203ENST00000429544 E7EWF7 191 aa19.25■□□□□ 0.67
MBD4-203ENST00000429544 DNM1Q05193 864 aaKnown RBP19.25■□□□□ 0.67
MBD4-203ENST00000429544 TTLL5Q6EMB2 1281 aa19.25■□□□□ 0.67
MBD4-203ENST00000429544 CDC37L1Q7L3B6 337 aa19.25■□□□□ 0.67
MBD4-203ENST00000429544 DHX32Q7L7V1 743 aaKnown RBP19.25■□□□□ 0.67
MBD4-203ENST00000429544 FAM98CQ17RN3 349 aaKnown RBP19.24■□□□□ 0.67
MBD4-203ENST00000429544 TPRNQ4KMQ1 711 aa19.24■□□□□ 0.67
MBD4-203ENST00000429544 LRSAM1Q6UWE0 723 aa19.24■□□□□ 0.67
MBD4-203ENST00000429544 HELBQ8NG08 1087 aaPredicted RBP19.24■□□□□ 0.67
MBD4-203ENST00000429544 APPBP2Q92624 585 aa19.24■□□□□ 0.67
MBD4-203ENST00000429544 SYAP1Q96A49 352 aaPredicted RBP19.24■□□□□ 0.67
MBD4-203ENST00000429544 AK7Q96M32 723 aa19.24■□□□□ 0.67
MBD4-203ENST00000429544 RBSNQ9H1K0 784 aa19.24■□□□□ 0.67
MBD4-203ENST00000429544 PDCP20941 246 aa19.24■□□□□ 0.67
MBD4-203ENST00000429544 LAMB2P55268 1798 aa19.23■□□□□ 0.67
MBD4-203ENST00000429544 FAM43AQ8N2R8 423 aa19.23■□□□□ 0.67
MBD4-203ENST00000429544 JAK2O60674 1132 aa19.23■□□□□ 0.67
MBD4-203ENST00000429544 PHKA1P46020 1223 aa19.23■□□□□ 0.67
MBD4-203ENST00000429544 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
MBD4-203ENST00000429544 PUS7LQ9H0K6 701 aaKnown RBP19.23■□□□□ 0.67
MBD4-203ENST00000429544 NIP7Q9Y221 180 aaKnown RBP eCLIP19.23■□□□□ 0.67
MBD4-203ENST00000429544 BCORQ6W2J9 1755 aa19.22■□□□□ 0.67
MBD4-203ENST00000429544 FOXP2O15409 715 aa19.22■□□□□ 0.67
MBD4-203ENST00000429544 PARP10Q53GL7 1025 aa19.22■□□□□ 0.67
MBD4-203ENST00000429544 FERMT3Q86UX7 667 aa19.22■□□□□ 0.67
MBD4-203ENST00000429544 SEC31BQ9NQW1 1179 aa19.22■□□□□ 0.67
MBD4-203ENST00000429544 MROH5Q6ZUA9 1318 aa19.22■□□□□ 0.67
MBD4-203ENST00000429544 PUM3Q15397 648 aaKnown RBP19.22■□□□□ 0.67
MBD4-203ENST00000429544 CCDC102BQ68D86 513 aa19.22■□□□□ 0.67
MBD4-203ENST00000429544 ZNF512BQ96KM6 892 aaPredicted RBP19.22■□□□□ 0.67
MBD4-203ENST00000429544 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.22■□□□□ 0.675e-6■■■■■ 34.6
MBD4-203ENST00000429544 UBE2HP62256 183 aa19.21■□□□□ 0.67
MBD4-203ENST00000429544 EXOSC10Q01780 885 aaKnown RBP19.21■□□□□ 0.67
MBD4-203ENST00000429544 APOBRQ0VD83 1088 aa19.21■□□□□ 0.67
MBD4-203ENST00000429544 PIH1D3Q9NQM4 214 aaKnown RBP19.21■□□□□ 0.67
MBD4-203ENST00000429544 NTSR2O95665 410 aa19.2■□□□□ 0.66
MBD4-203ENST00000429544 PDIA4P13667 645 aaKnown RBP19.2■□□□□ 0.66
MBD4-203ENST00000429544 HAND2P61296 217 aa19.2■□□□□ 0.66
MBD4-203ENST00000429544 C8orf37Q96NL8 207 aa19.2■□□□□ 0.66
MBD4-203ENST00000429544 CTNNA3Q9UI47 895 aa19.2■□□□□ 0.66
MBD4-203ENST00000429544 GPAA1O43292 621 aa19.2■□□□□ 0.66
MBD4-203ENST00000429544 FGFR2P21802 821 aa19.2■□□□□ 0.66
MBD4-203ENST00000429544 SCRN1Q12765 414 aa19.2■□□□□ 0.66
MBD4-203ENST00000429544 CSPP1Q1MSJ5 1256 aa19.2■□□□□ 0.66
MBD4-203ENST00000429544 LPIN2Q92539 896 aa19.2■□□□□ 0.66
MBD4-203ENST00000429544 PFKFB2O60825 505 aa19.19■□□□□ 0.66
MBD4-203ENST00000429544 ARID4AP29374 1257 aaPredicted RBP19.19■□□□□ 0.66
MBD4-203ENST00000429544 CHST3Q7LGC8 479 aa19.19■□□□□ 0.66
MBD4-203ENST00000429544 MPHOSPH8Q99549 860 aa19.19■□□□□ 0.66
MBD4-203ENST00000429544 UQCRFS1P1P0C7P4 283 aa19.19■□□□□ 0.66
MBD4-203ENST00000429544 ADD2P35612 726 aa19.19■□□□□ 0.66
MBD4-203ENST00000429544 TTF1Q15361 905 aaPredicted RBP19.19■□□□□ 0.66
MBD4-203ENST00000429544 ZSCAN25Q6NSZ9 544 aa19.19■□□□□ 0.66
MBD4-203ENST00000429544 IDH1O75874 414 aaKnown RBP19.18■□□□□ 0.66
MBD4-203ENST00000429544 FGAP02671 866 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 SLC5A1P13866 664 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 IMMTQ16891 758 aaKnown RBP19.18■□□□□ 0.66
MBD4-203ENST00000429544 CCDC152Q4G0S7 254 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 SLC9C2Q5TAH2 1124 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 FAM173BQ6P4H8 233 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 ANP32BQ92688 251 aaKnown RBP19.18■□□□□ 0.66
MBD4-203ENST00000429544 DDX11Q96FC9 970 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 NGLY1Q96IV0 654 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 SNAP23O00161 211 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 CCDC173Q0VFZ6 552 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 LINC00116Q8NCU8 138 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 AGXT2Q9BYV1 514 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 NAP1L2Q9ULW6 460 aaPredicted RBP19.18■□□□□ 0.66
MBD4-203ENST00000429544 ZNF831Q5JPB2 1677 aa19.18■□□□□ 0.66
MBD4-203ENST00000429544 PHF14O94880 888 aa19.17■□□□□ 0.66
MBD4-203ENST00000429544 KCNQ4P56696 695 aa19.17■□□□□ 0.66
MBD4-203ENST00000429544 RRAGDQ9NQL2 400 aaPredicted RBP19.17■□□□□ 0.66
MBD4-203ENST00000429544 BCL9LQ86UU0 1499 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms