RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 CWC22Q9HCG8 908 aaKnown RBP11.66□□□□□ -0.54
NEDD1-203ENST00000429527 APLP1P51693 650 aa11.65□□□□□ -0.54
NEDD1-203ENST00000429527 MFAP1P55081 439 aaKnown RBP11.65□□□□□ -0.54
NEDD1-203ENST00000429527 TTC22Q5TAA0 569 aa11.65□□□□□ -0.54
NEDD1-203ENST00000429527 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
NEDD1-203ENST00000429527 ATP5J2-PTCD1G3V325 749 aa11.65□□□□□ -0.54
NEDD1-203ENST00000429527 GSPT1P15170 499 aaKnown RBP11.65□□□□□ -0.54
NEDD1-203ENST00000429527 RPS8P62241 208 aaKnown RBP11.65□□□□□ -0.54
NEDD1-203ENST00000429527 RPAP2Q8IXW5 612 aaPredicted RBP11.65□□□□□ -0.54
NEDD1-203ENST00000429527 NMRK2Q9NPI5 230 aa11.65□□□□□ -0.54
NEDD1-203ENST00000429527 MPNDQ8N594 471 aa11.65□□□□□ -0.54
NEDD1-203ENST00000429527 ZNRF3Q9ULT6 936 aa11.65□□□□□ -0.54
NEDD1-203ENST00000429527 RPS12P25398 132 aaKnown RBP11.64□□□□□ -0.55
NEDD1-203ENST00000429527 LDHDQ86WU2 507 aa11.64□□□□□ -0.55
NEDD1-203ENST00000429527 CELF1Q92879 486 aaKnown RBP11.64□□□□□ -0.55
NEDD1-203ENST00000429527 CDC5LQ99459 802 aaKnown RBP11.64□□□□□ -0.55
NEDD1-203ENST00000429527 SRCAPQ6ZRS2 3230 aa11.64□□□□□ -0.55
NEDD1-203ENST00000429527 ATP2B4P23634 1241 aa11.64□□□□□ -0.55
NEDD1-203ENST00000429527 CCDC173Q0VFZ6 552 aa11.64□□□□□ -0.55
NEDD1-203ENST00000429527 EYA3Q99504 573 aa11.64□□□□□ -0.55
NEDD1-203ENST00000429527 PAPPA2Q9BXP8 1791 aa11.64□□□□□ -0.55
NEDD1-203ENST00000429527 XDHP47989 1333 aa11.64□□□□□ -0.55
NEDD1-203ENST00000429527 FKBP1AP62942 108 aaKnown RBP11.64□□□□□ -0.55
NEDD1-203ENST00000429527 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
NEDD1-203ENST00000429527 ZNF277Q9NRM2 450 aaPredicted RBP11.64□□□□□ -0.55
NEDD1-203ENST00000429527 AOX1Q06278 1338 aa11.63□□□□□ -0.55
NEDD1-203ENST00000429527 USP50Q70EL3 339 aaPredicted RBP11.63□□□□□ -0.55
NEDD1-203ENST00000429527 DPF2Q92785 391 aa11.63□□□□□ -0.55
NEDD1-203ENST00000429527 TAF1DQ9H5J8 278 aaPredicted RBP11.63□□□□□ -0.55
NEDD1-203ENST00000429527 COL1A1P02452 1464 aaPredicted RBP11.63□□□□□ -0.55
NEDD1-203ENST00000429527 ELL2O00472 640 aaPredicted RBP11.63□□□□□ -0.55
NEDD1-203ENST00000429527 GPSM2P81274 684 aa11.63□□□□□ -0.55
NEDD1-203ENST00000429527 DPP8Q6V1X1 898 aaPredicted RBP11.63□□□□□ -0.55
NEDD1-203ENST00000429527 PNMA8AQ86V59 439 aaPredicted RBP11.63□□□□□ -0.55
NEDD1-203ENST00000429527 TBC1D16Q8TBP0 767 aa11.63□□□□□ -0.55
NEDD1-203ENST00000429527 RRAGCQ9HB90 399 aa11.63□□□□□ -0.55
NEDD1-203ENST00000429527 LEMD3Q9Y2U8 911 aa11.63□□□□□ -0.55
NEDD1-203ENST00000429527 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
NEDD1-203ENST00000429527 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
NEDD1-203ENST00000429527 TMX4Q9H1E5 349 aaPredicted RBP11.62□□□□□ -0.55
NEDD1-203ENST00000429527 FAM177BA6PVY3 158 aa11.62□□□□□ -0.55
NEDD1-203ENST00000429527 GRM8O00222 908 aa11.62□□□□□ -0.55
NEDD1-203ENST00000429527 NUCB2P80303 420 aa11.62□□□□□ -0.55
NEDD1-203ENST00000429527 OLFM4Q6UX06 510 aa11.62□□□□□ -0.55
NEDD1-203ENST00000429527 GAS2L3Q86XJ1 694 aa11.62□□□□□ -0.55
NEDD1-203ENST00000429527 NIM1KQ8IY84 436 aa11.62□□□□□ -0.55
NEDD1-203ENST00000429527 ANKRD2Q9GZV1 360 aa11.62□□□□□ -0.55
NEDD1-203ENST00000429527 HACL1Q9UJ83 578 aa11.62□□□□□ -0.55
NEDD1-203ENST00000429527 FBXO3Q9UK99 471 aa11.62□□□□□ -0.55
NEDD1-203ENST00000429527 SCNN1DP51172 638 aa11.61□□□□□ -0.55
NEDD1-203ENST00000429527 EIF6P56537 245 aaKnown RBP11.61□□□□□ -0.55
NEDD1-203ENST00000429527 FKBP5Q13451 457 aaPredicted RBP11.61□□□□□ -0.55
NEDD1-203ENST00000429527 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
NEDD1-203ENST00000429527 JMYQ8N9B5 988 aa11.61□□□□□ -0.55
NEDD1-203ENST00000429527 ZC3H15Q8WU90 426 aaKnown RBP11.61□□□□□ -0.55
NEDD1-203ENST00000429527 PANK2Q9BZ23 570 aa11.61□□□□□ -0.55
NEDD1-203ENST00000429527 POLLQ9UGP5 575 aa11.61□□□□□ -0.55
NEDD1-203ENST00000429527 ESPNB1AK53 854 aa11.61□□□□□ -0.55
NEDD1-203ENST00000429527 RRP9O43818 475 aaKnown RBP11.61□□□□□ -0.55
NEDD1-203ENST00000429527 TNIP1Q15025 636 aa11.61□□□□□ -0.55
NEDD1-203ENST00000429527 ANKRD18AQ8IVF6 992 aa11.61□□□□□ -0.55
NEDD1-203ENST00000429527 DNAJC5GQ8N7S2 189 aa11.61□□□□□ -0.55
NEDD1-203ENST00000429527 VIL1P09327 827 aaKnown RBP11.61□□□□□ -0.55
NEDD1-203ENST00000429527 CWF19L2Q2TBE0 894 aaKnown RBP11.61□□□□□ -0.55
NEDD1-203ENST00000429527 JDP2Q8WYK2 163 aa11.61□□□□□ -0.55
NEDD1-203ENST00000429527 TPM2P07951 284 aa11.6□□□□□ -0.55
NEDD1-203ENST00000429527 ZNF280AP59817 542 aaPredicted RBP11.6□□□□□ -0.55
NEDD1-203ENST00000429527 KAZALD1Q96I82 304 aa11.6□□□□□ -0.55
NEDD1-203ENST00000429527 YDJCA8MPS7 323 aa11.6□□□□□ -0.55
NEDD1-203ENST00000429527 CUL4AQ13619 759 aa11.6□□□□□ -0.55
NEDD1-203ENST00000429527 SRCIN1Q9C0H9 1055 aa11.6□□□□□ -0.55
NEDD1-203ENST00000429527 BAG4O95429 457 aaKnown RBP11.59□□□□□ -0.55
NEDD1-203ENST00000429527 MCM5P33992 734 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 CCT4P50991 539 aaKnown RBP11.59□□□□□ -0.55
NEDD1-203ENST00000429527 GMLQ99445 158 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 LNPKQ9C0E8 428 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 GREM2Q9H772 168 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 GPRC5DQ9NZD1 345 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 MINPP1Q9UNW1 487 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 ZNF500O60304 480 aaPredicted RBP11.59□□□□□ -0.55
NEDD1-203ENST00000429527 CEP85Q6P2H3 762 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 MYH13Q9UKX3 1938 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 PPIP5K2O43314 1243 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 ANAPC15P60006 121 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 LARGE2Q8N3Y3 721 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 AGBL3Q8NEM8 1001 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 SEC31BQ9NQW1 1179 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 LMBRD1Q9NUN5 540 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 GGA1Q9UJY5 639 aa11.59□□□□□ -0.55
NEDD1-203ENST00000429527 DDNO94850 711 aaPredicted RBP11.58□□□□□ -0.56
NEDD1-203ENST00000429527 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
NEDD1-203ENST00000429527 CXCL9Q07325 125 aa11.58□□□□□ -0.56
NEDD1-203ENST00000429527 AOC3Q16853 763 aa11.58□□□□□ -0.56
NEDD1-203ENST00000429527 ADARB2Q9NS39 739 aaKnown RBP11.58□□□□□ -0.56
NEDD1-203ENST00000429527 WWC3Q9ULE0 1092 aa11.58□□□□□ -0.56
NEDD1-203ENST00000429527 CIAPIN1Q6FI81 312 aa11.58□□□□□ -0.56
NEDD1-203ENST00000429527 PODNQ7Z5L7 613 aa11.58□□□□□ -0.56
NEDD1-203ENST00000429527 MYO3BQ8WXR4 1341 aa11.58□□□□□ -0.56
NEDD1-203ENST00000429527 EPHX2P34913 555 aa11.58□□□□□ -0.56
NEDD1-203ENST00000429527 MTX1Q13505 466 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms