RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 TFCP2Q12800 502 aa27.65■■■□□ 2.02
PTPN18-205ENST00000428843 PUM3Q15397 648 aaKnown RBP27.65■■■□□ 2.02
PTPN18-205ENST00000428843 YDJCA8MPS7 323 aa27.64■■■□□ 2.02
PTPN18-205ENST00000428843 EIF6P56537 245 aaKnown RBP27.64■■■□□ 2.02
PTPN18-205ENST00000428843 OS9Q13438 667 aaPredicted RBP27.64■■■□□ 2.02
PTPN18-205ENST00000428843 SASH1O94885 1247 aa27.63■■■□□ 2.01
PTPN18-205ENST00000428843 EXOC6BQ9Y2D4 811 aa27.63■■■□□ 2.01
PTPN18-205ENST00000428843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.63■■■□□ 2.01
PTPN18-205ENST00000428843 AAMPQ13685 434 aa27.62■■■□□ 2.01
PTPN18-205ENST00000428843 COA1Q9GZY4 146 aa27.62■■■□□ 2.01
PTPN18-205ENST00000428843 SCN9AQ15858 1988 aa27.62■■■□□ 2.01
PTPN18-205ENST00000428843 GLTPD2A6NH11 291 aa27.61■■■□□ 2.01
PTPN18-205ENST00000428843 IFIT1P09914 478 aaKnown RBP27.61■■■□□ 2.01
PTPN18-205ENST00000428843 SLC5A1P13866 664 aa27.61■■■□□ 2.01
PTPN18-205ENST00000428843 ATP2B3Q16720 1220 aa27.61■■■□□ 2.01
PTPN18-205ENST00000428843 DPY19L2Q6NUT2 758 aa27.61■■■□□ 2.01
PTPN18-205ENST00000428843 LPIN2Q92539 896 aa27.61■■■□□ 2.01
PTPN18-205ENST00000428843 CXCL9Q07325 125 aa27.6■■■□□ 2.01
PTPN18-205ENST00000428843 KCNQ5Q9NR82 932 aa27.6■■■□□ 2.01
PTPN18-205ENST00000428843 RAD17O75943 681 aa27.59■■■□□ 2.01
PTPN18-205ENST00000428843 DDNO94850 711 aaPredicted RBP27.59■■■□□ 2.01
PTPN18-205ENST00000428843 GYG1P46976 350 aa27.59■■■□□ 2.01
PTPN18-205ENST00000428843 ZNF804AQ7Z570 1209 aa27.59■■■□□ 2.01
PTPN18-205ENST00000428843 ZNF526Q8TF50 670 aaPredicted RBP27.59■■■□□ 2.01
PTPN18-205ENST00000428843 AKAP2Q9Y2D5 859 aa27.59■■■□□ 2.01
PTPN18-205ENST00000428843 ARAP2Q8WZ64 1704 aa27.58■■■□□ 2.01
PTPN18-205ENST00000428843 PSME4Q14997 1843 aa27.58■■■□□ 2.01
PTPN18-205ENST00000428843 HSP90AB4PQ58FF6 505 aa27.58■■■□□ 2.01
PTPN18-205ENST00000428843 PODNQ7Z5L7 613 aa27.58■■■□□ 2.01
PTPN18-205ENST00000428843 FAM84BQ96KN1 310 aaPredicted RBP27.58■■■□□ 2.01
PTPN18-205ENST00000428843 CD209Q9NNX6 404 aa27.58■■■□□ 2.01
PTPN18-205ENST00000428843 CIAPIN1Q6FI81 312 aa27.57■■■□□ 2
PTPN18-205ENST00000428843 ERC1Q8IUD2 1116 aa27.57■■■□□ 2
PTPN18-205ENST00000428843 GJA3Q9Y6H8 435 aa27.57■■■□□ 2
PTPN18-205ENST00000428843 KDM2BQ8NHM5 1336 aa27.57■■■□□ 2
PTPN18-205ENST00000428843 ZNF609O15014 1411 aa27.57■■■□□ 2
PTPN18-205ENST00000428843 HIBADHP31937 336 aaKnown RBP27.56■■■□□ 2
PTPN18-205ENST00000428843 TIMM10P62072 90 aa27.56■■■□□ 2
PTPN18-205ENST00000428843 CAVIN4Q5BKX8 364 aa27.56■■■□□ 2
PTPN18-205ENST00000428843 FBXO33Q7Z6M2 555 aa27.56■■■□□ 2
PTPN18-205ENST00000428843 GPC2Q8N158 579 aa27.56■■■□□ 2
PTPN18-205ENST00000428843 A0A1B0GUL7 405 aa27.55■■■□□ 2
PTPN18-205ENST00000428843 TNIP1Q15025 636 aa27.55■■■□□ 2
PTPN18-205ENST00000428843 ZNF784Q8NCA9 323 aaPredicted RBP27.55■■■□□ 2
PTPN18-205ENST00000428843 PSMD14O00487 310 aa27.54■■■□□ 2
PTPN18-205ENST00000428843 ZNF646O15015 1829 aaPredicted RBP27.54■■■□□ 2
PTPN18-205ENST00000428843 IL1R1P14778 569 aa27.54■■■□□ 2
PTPN18-205ENST00000428843 ADORA1P30542 326 aa27.54■■■□□ 2
PTPN18-205ENST00000428843 BCAMP50895 628 aa27.54■■■□□ 2
PTPN18-205ENST00000428843 VPS37DQ86XT2 251 aa27.54■■■□□ 2
PTPN18-205ENST00000428843 WDR90Q96KV7 1748 aa27.54■■■□□ 2
PTPN18-205ENST00000428843 GPR108Q9NPR9 543 aa27.54■■■□□ 2
PTPN18-205ENST00000428843 APBB1O00213 710 aa27.53■■■□□ 2
PTPN18-205ENST00000428843 RAB11FIP3O75154 756 aa27.53■■■□□ 2
PTPN18-205ENST00000428843 TNNI3KQ59H18 835 aa27.53■■■□□ 2
PTPN18-205ENST00000428843 RHPN1Q8TCX5 695 aa27.53■■■□□ 2
PTPN18-205ENST00000428843 NEUROD6Q96NK8 337 aa27.53■■■□□ 2
PTPN18-205ENST00000428843 FPGT-TNNI3KV9GXZ4 949 aa27.53■■■□□ 2
PTPN18-205ENST00000428843 USP17L3A6NCW0 530 aa27.52■■■□□ 2
PTPN18-205ENST00000428843 USP17L4A6NCW7 530 aa27.52■■■□□ 2
PTPN18-205ENST00000428843 USP17L1Q7RTZ2 530 aa27.52■■■□□ 2
PTPN18-205ENST00000428843 TDRD7Q8NHU6 1098 aaKnown RBP27.52■■■□□ 2
PTPN18-205ENST00000428843 DCTPP1Q9H773 170 aa27.52■■■□□ 2
PTPN18-205ENST00000428843 VIL1P09327 827 aaKnown RBP27.51■■□□□ 1.99
PTPN18-205ENST00000428843 FBXW7Q969H0 707 aa27.51■■□□□ 1.99
PTPN18-205ENST00000428843 KIF1BPQ96EK5 621 aa27.51■■□□□ 1.99
PTPN18-205ENST00000428843 XAGE2Q96GT9 111 aa27.51■■□□□ 1.99
PTPN18-205ENST00000428843 GPBP1L1Q9HC44 474 aaPredicted RBP27.51■■□□□ 1.99
PTPN18-205ENST00000428843 HDAC1Q13547 482 aaPredicted RBP27.5■■□□□ 1.99
PTPN18-205ENST00000428843 L3MBTL3Q96JM7 780 aaPredicted RBP27.5■■□□□ 1.99
PTPN18-205ENST00000428843 IL1RAPL2Q9NP60 686 aa27.5■■□□□ 1.99
PTPN18-205ENST00000428843 NMRK2Q9NPI5 230 aa27.5■■□□□ 1.99
PTPN18-205ENST00000428843 IQSEC3Q9UPP2 1182 aaPredicted RBP27.5■■□□□ 1.99
PTPN18-205ENST00000428843 GTF2IP78347 998 aa27.49■■□□□ 1.99
PTPN18-205ENST00000428843 STRIP1Q5VSL9 837 aa27.49■■□□□ 1.99
PTPN18-205ENST00000428843 TTLL5Q6EMB2 1281 aa27.49■■□□□ 1.99
PTPN18-205ENST00000428843 RRAGCQ9HB90 399 aa27.49■■□□□ 1.99
PTPN18-205ENST00000428843 ZBTB12Q9Y330 459 aaPredicted RBP27.49■■□□□ 1.99
PTPN18-205ENST00000428843 MYH13Q9UKX3 1938 aa27.49■■□□□ 1.99
PTPN18-205ENST00000428843 POTECB2RU33 542 aa27.48■■□□□ 1.99
PTPN18-205ENST00000428843 PHKA1P46020 1223 aa27.48■■□□□ 1.99
PTPN18-205ENST00000428843 GMPSP49915 693 aaPredicted RBP27.48■■□□□ 1.99
PTPN18-205ENST00000428843 EAF2Q96CJ1 260 aaPredicted RBP27.48■■□□□ 1.99
PTPN18-205ENST00000428843 SCN4AP35499 1836 aa27.47■■□□□ 1.99
PTPN18-205ENST00000428843 DACT2Q5SW24 774 aa27.47■■□□□ 1.99
PTPN18-205ENST00000428843 CCDC102BQ68D86 513 aa27.47■■□□□ 1.99
PTPN18-205ENST00000428843 RSBN1LQ6PCB5 846 aaPredicted RBP27.47■■□□□ 1.99
PTPN18-205ENST00000428843 FRAT2O75474 233 aaPredicted RBP27.46■■□□□ 1.99
PTPN18-205ENST00000428843 SCNN1DP51172 638 aa27.46■■□□□ 1.99
PTPN18-205ENST00000428843 DBNDD2Q9BQY9 259 aa27.46■■□□□ 1.99
PTPN18-205ENST00000428843 MXD3Q9BW11 206 aa27.46■■□□□ 1.99
PTPN18-205ENST00000428843 CCDC8Q9H0W5 538 aaPredicted RBP27.46■■□□□ 1.99
PTPN18-205ENST00000428843 JAG2Q9Y219 1238 aa27.46■■□□□ 1.99
PTPN18-205ENST00000428843 FAM205AQ6ZU69 1335 aa27.45■■□□□ 1.99
PTPN18-205ENST00000428843 GORABQ5T7V8 394 aa27.45■■□□□ 1.98
PTPN18-205ENST00000428843 AACSQ86V21 672 aa27.45■■□□□ 1.98
PTPN18-205ENST00000428843 CLASRPQ8N2M8 674 aaKnown RBP27.45■■□□□ 1.98
PTPN18-205ENST00000428843 LRRCC1Q9C099 1032 aa27.45■■□□□ 1.98
PTPN18-205ENST00000428843 RWDD1Q9H446 243 aaPredicted RBP27.45■■□□□ 1.98
PTPN18-205ENST00000428843 VEGFAP15692 232 aaPredicted RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms