RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 C10orf71Q711Q0 1435 aa15.42■□□□□ 0.06
HMGB3P4-201ENST00000428776 XDHP47989 1333 aa15.42■□□□□ 0.06
HMGB3P4-201ENST00000428776 SNAP23O00161 211 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 PPEF1O14829 653 aaPredicted RBP15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 REC8O95072 547 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 PHKA1P46020 1223 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 CAVIN4Q5BKX8 364 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 SP8Q8IXZ3 490 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 RUFY2Q8WXA3 655 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 ESYT1Q9BSJ8 1104 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 MTFR1LQ9H019 292 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 DIAPH3Q9NSV4 1193 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 ANKIB1Q9P2G1 1089 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 ZNF804BA4D1E1 1349 aa15.41■□□□□ 0.06
HMGB3P4-201ENST00000428776 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
HMGB3P4-201ENST00000428776 GOLIM4O00461 696 aa15.4■□□□□ 0.06
HMGB3P4-201ENST00000428776 FKBP4Q02790 459 aaKnown RBP eCLIP15.4■□□□□ 0.06
HMGB3P4-201ENST00000428776 R3HDM1Q15032 1099 aaKnown RBP15.4■□□□□ 0.06
HMGB3P4-201ENST00000428776 KBTBD3Q8NAB2 608 aa15.4■□□□□ 0.06
HMGB3P4-201ENST00000428776 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
HMGB3P4-201ENST00000428776 PODXL2Q9NZ53 605 aa15.4■□□□□ 0.06
HMGB3P4-201ENST00000428776 ATP6V0A2Q9Y487 856 aa15.4■□□□□ 0.06
HMGB3P4-201ENST00000428776 ATP2B4P23634 1241 aa15.39■□□□□ 0.05
HMGB3P4-201ENST00000428776 POLD1P28340 1107 aa15.39■□□□□ 0.05
HMGB3P4-201ENST00000428776 MCAMP43121 646 aa15.39■□□□□ 0.05
HMGB3P4-201ENST00000428776 BCAMP50895 628 aa15.39■□□□□ 0.05
HMGB3P4-201ENST00000428776 SCARF1Q14162 830 aa15.39■□□□□ 0.05
HMGB3P4-201ENST00000428776 TTF1Q15361 905 aaPredicted RBP15.39■□□□□ 0.05
HMGB3P4-201ENST00000428776 LRRFIP1Q32MZ4 808 aaKnown RBP15.39■□□□□ 0.05
HMGB3P4-201ENST00000428776 EDC3Q96F86 508 aaKnown RBP15.39■□□□□ 0.05
HMGB3P4-201ENST00000428776 TBC1D32Q96NH3 1257 aa15.39■□□□□ 0.05
HMGB3P4-201ENST00000428776 NDUFB9Q9Y6M9 179 aa15.39■□□□□ 0.05
HMGB3P4-201ENST00000428776 KIAA1551Q9HCM1 1747 aa15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 WTIPA6NIX2 430 aaPredicted RBP15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 ZBTB22O15209 634 aa15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 ZBTB7AO95365 584 aa15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 ZAP70P43403 619 aa15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 GPSM2P81274 684 aa15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 CWC27Q6UX04 472 aaKnown RBP15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 C15orf52Q6ZUT6 534 aaKnown RBP15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 FBXO33Q7Z6M2 555 aa15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 SPATA5Q8NB90 893 aa15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 CNKSR1Q969H4 720 aa15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 ZNF622Q969S3 477 aaKnown RBP eCLIP15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 FAM84BQ96KN1 310 aaPredicted RBP15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 C22orf23Q9BZE7 217 aa15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 TMX4Q9H1E5 349 aaPredicted RBP15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 SNRKQ9NRH2 765 aa15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 NSFL1CQ9UNZ2 370 aaKnown RBP15.38■□□□□ 0.05
HMGB3P4-201ENST00000428776 SEMA3EO15041 775 aa15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 SGSM2O43147 1006 aa15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 EPB41L2O43491 1005 aaKnown RBP15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 GYG1P46976 350 aa15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 VPS37DQ86XT2 251 aa15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 USP26Q9BXU7 913 aa15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 HMG20BQ9P0W2 317 aa15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 GGA1Q9UJY5 639 aa15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 BRCA1P38398 1863 aaKnown RBP15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 RAD50Q92878 1312 aa15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 IRS2Q9Y4H2 1338 aa15.37■□□□□ 0.05
HMGB3P4-201ENST00000428776 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
HMGB3P4-201ENST00000428776 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
HMGB3P4-201ENST00000428776 RBM25P49756 843 aaKnown RBP15.36■□□□□ 0.05
HMGB3P4-201ENST00000428776 NMIQ13287 307 aaPredicted RBP15.36■□□□□ 0.05
HMGB3P4-201ENST00000428776 RASGRF1Q13972 1273 aa15.36■□□□□ 0.05
HMGB3P4-201ENST00000428776 PI16Q6UXB8 463 aa15.36■□□□□ 0.05
HMGB3P4-201ENST00000428776 ANTXR1Q9H6X2 564 aa15.36■□□□□ 0.05
HMGB3P4-201ENST00000428776 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
HMGB3P4-201ENST00000428776 UFL1O94874 794 aa15.35■□□□□ 0.05
HMGB3P4-201ENST00000428776 CYP2E1P05181 493 aaPredicted RBP15.35■□□□□ 0.05
HMGB3P4-201ENST00000428776 CHRNA5P30532 468 aa15.35■□□□□ 0.05
HMGB3P4-201ENST00000428776 ANP32AP39687 249 aaKnown RBP15.35■□□□□ 0.05
HMGB3P4-201ENST00000428776 ZSCAN25Q6NSZ9 544 aa15.35■□□□□ 0.05
HMGB3P4-201ENST00000428776 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.35■□□□□ 0.05
HMGB3P4-201ENST00000428776 DENND2AQ9ULE3 1009 aa15.35■□□□□ 0.05
HMGB3P4-201ENST00000428776 PDS5AQ29RF7 1337 aaKnown RBP15.35■□□□□ 0.05
HMGB3P4-201ENST00000428776 RNF113AO15541 343 aaKnown RBP15.34■□□□□ 0.05
HMGB3P4-201ENST00000428776 KLRK1P26718 216 aa15.34■□□□□ 0.05
HMGB3P4-201ENST00000428776 PRPF40BQ6NWY9 871 aaKnown RBP15.34■□□□□ 0.05
HMGB3P4-201ENST00000428776 KIAA1211Q6ZU35 1233 aa15.34■□□□□ 0.05
HMGB3P4-201ENST00000428776 ZNF804AQ7Z570 1209 aa15.34■□□□□ 0.05
HMGB3P4-201ENST00000428776 MPNDQ8N594 471 aa15.34■□□□□ 0.05
HMGB3P4-201ENST00000428776 TBC1D16Q8TBP0 767 aa15.34■□□□□ 0.05
HMGB3P4-201ENST00000428776 FAM227BQ96M60 508 aa15.34■□□□□ 0.05
HMGB3P4-201ENST00000428776 HELLSQ9NRZ9 838 aa15.34■□□□□ 0.05
HMGB3P4-201ENST00000428776 MED23Q9ULK4 1368 aa15.34■□□□□ 0.05
HMGB3P4-201ENST00000428776 CHD4Q14839 1912 aa15.33■□□□□ 0.05
HMGB3P4-201ENST00000428776 DUOX1Q9NRD9 1551 aa15.33■□□□□ 0.05
HMGB3P4-201ENST00000428776 A0A0D9SFI3 127 aa15.33■□□□□ 0.04
HMGB3P4-201ENST00000428776 TGFB2P61812 414 aa15.33■□□□□ 0.04
HMGB3P4-201ENST00000428776 CC2D2BQ6DHV5 1058 aa15.33■□□□□ 0.04
HMGB3P4-201ENST00000428776 SLC51AQ86UW1 340 aa15.33■□□□□ 0.04
HMGB3P4-201ENST00000428776 TXNRD3Q86VQ6 643 aa15.33■□□□□ 0.04
HMGB3P4-201ENST00000428776 IL25Q9H293 177 aa15.33■□□□□ 0.04
HMGB3P4-201ENST00000428776 ANO2Q9NQ90 1003 aa15.33■□□□□ 0.04
HMGB3P4-201ENST00000428776 POLLQ9UGP5 575 aa15.33■□□□□ 0.04
HMGB3P4-201ENST00000428776 MAST2Q6P0Q8 1798 aa15.33■□□□□ 0.04
HMGB3P4-201ENST00000428776 PSDA5PKW4 1024 aaPredicted RBP15.32■□□□□ 0.04
HMGB3P4-201ENST00000428776 C6orf229H3BNL8 230 aa15.32■□□□□ 0.04
HMGB3P4-201ENST00000428776 FRAT2O75474 233 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms