RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 FBXW7Q969H0 707 aa21.76■■□□□ 1.07
TRIM39-209ENST00000428728 HUNKP57058 714 aa21.75■■□□□ 1.07
TRIM39-209ENST00000428728 PODNQ7Z5L7 613 aa21.75■■□□□ 1.07
TRIM39-209ENST00000428728 HHIPL1Q96JK4 782 aa21.75■■□□□ 1.07
TRIM39-209ENST00000428728 MPHOSPH8Q99549 860 aa21.75■■□□□ 1.07
TRIM39-209ENST00000428728 CASP8AP2Q9UKL3 1982 aa21.74■■□□□ 1.07
TRIM39-209ENST00000428728 MAP2K2P36507 400 aa21.74■■□□□ 1.07
TRIM39-209ENST00000428728 ZNF280AP59817 542 aaPredicted RBP21.74■■□□□ 1.07
TRIM39-209ENST00000428728 SULF1Q8IWU6 871 aa21.74■■□□□ 1.07
TRIM39-209ENST00000428728 TSKSQ9UJT2 592 aa21.74■■□□□ 1.07
TRIM39-209ENST00000428728 CHMP3Q9Y3E7 222 aa21.74■■□□□ 1.07
TRIM39-209ENST00000428728 AKAP11Q9UKA4 1901 aa21.74■■□□□ 1.07
TRIM39-209ENST00000428728 CSF1RP07333 972 aa21.73■■□□□ 1.07
TRIM39-209ENST00000428728 USP17L8P0C7I0 530 aa21.73■■□□□ 1.07
TRIM39-209ENST00000428728 KLRK1P26718 216 aa21.73■■□□□ 1.07
TRIM39-209ENST00000428728 TXNRD3Q86VQ6 643 aa21.73■■□□□ 1.07
TRIM39-209ENST00000428728 GMLQ99445 158 aa21.73■■□□□ 1.07
TRIM39-209ENST00000428728 MXD3Q9BW11 206 aa21.73■■□□□ 1.07
TRIM39-209ENST00000428728 GBA2Q9HCG7 927 aaPredicted RBP21.73■■□□□ 1.07
TRIM39-209ENST00000428728 ECM29Q5VYK3 1845 aa21.72■■□□□ 1.07
TRIM39-209ENST00000428728 SCARF1Q14162 830 aa21.72■■□□□ 1.07
TRIM39-209ENST00000428728 BEND3Q5T5X7 828 aa21.72■■□□□ 1.07
TRIM39-209ENST00000428728 ANGEL2Q5VTE6 544 aaKnown RBP21.72■■□□□ 1.07
TRIM39-209ENST00000428728 MYOZ2Q9NPC6 264 aa21.72■■□□□ 1.07
TRIM39-209ENST00000428728 LEMD3Q9Y2U8 911 aa21.72■■□□□ 1.07
TRIM39-209ENST00000428728 ZNF804BA4D1E1 1349 aa21.72■■□□□ 1.07
TRIM39-209ENST00000428728 PAPPA2Q9BXP8 1791 aa21.71■■□□□ 1.07
TRIM39-209ENST00000428728 ANKRD18BA2A2Z9 1011 aa21.71■■□□□ 1.07
TRIM39-209ENST00000428728 KCNJ4P48050 445 aa21.71■■□□□ 1.07
TRIM39-209ENST00000428728 C2orf69Q8N8R5 385 aa21.71■■□□□ 1.07
TRIM39-209ENST00000428728 ANKRD2Q9GZV1 360 aa21.71■■□□□ 1.07
TRIM39-209ENST00000428728 COA1Q9GZY4 146 aa21.71■■□□□ 1.07
TRIM39-209ENST00000428728 CHRNDQ07001 517 aa21.7■■□□□ 1.06
TRIM39-209ENST00000428728 DACT2Q5SW24 774 aa21.7■■□□□ 1.06
TRIM39-209ENST00000428728 CDCA5Q96FF9 252 aa21.7■■□□□ 1.06
TRIM39-209ENST00000428728 BRPF1P55201 1214 aaPredicted RBP21.69■■□□□ 1.06
TRIM39-209ENST00000428728 FOXO4P98177 505 aa21.69■■□□□ 1.06
TRIM39-209ENST00000428728 SLC4A10Q6U841 1118 aa21.69■■□□□ 1.06
TRIM39-209ENST00000428728 ZIC5Q96T25 663 aa21.69■■□□□ 1.06
TRIM39-209ENST00000428728 SCAF8Q9UPN6 1271 aaKnown RBP21.69■■□□□ 1.06
TRIM39-209ENST00000428728 NOGQ13253 232 aa21.68■■□□□ 1.06
TRIM39-209ENST00000428728 IFIT5Q13325 482 aaKnown RBP21.68■■□□□ 1.06
TRIM39-209ENST00000428728 RGMBQ6NW40 437 aa21.68■■□□□ 1.06
TRIM39-209ENST00000428728 MYO3BQ8WXR4 1341 aa21.67■■□□□ 1.06
TRIM39-209ENST00000428728 SNAP23O00161 211 aa21.67■■□□□ 1.06
TRIM39-209ENST00000428728 GRM8O00222 908 aa21.67■■□□□ 1.06
TRIM39-209ENST00000428728 STRIP1Q5VSL9 837 aa21.67■■□□□ 1.06
TRIM39-209ENST00000428728 HELBQ8NG08 1087 aaPredicted RBP21.67■■□□□ 1.06
TRIM39-209ENST00000428728 ZNF521Q96K83 1311 aa21.66■■□□□ 1.06
TRIM39-209ENST00000428728 PITPNM2Q9BZ72 1349 aa21.66■■□□□ 1.06
TRIM39-209ENST00000428728 TAF5LO75529 589 aa21.66■■□□□ 1.06
TRIM39-209ENST00000428728 NBPF9Q3BBW0 867 aa21.66■■□□□ 1.06
TRIM39-209ENST00000428728 EPHA10Q5JZY3 1008 aa21.66■■□□□ 1.06
TRIM39-209ENST00000428728 LMBR1LQ6UX01 489 aa21.66■■□□□ 1.06
TRIM39-209ENST00000428728 OGFOD1Q8N543 542 aa21.66■■□□□ 1.06
TRIM39-209ENST00000428728 C9orf78Q9NZ63 289 aaPredicted RBP21.66■■□□□ 1.06
TRIM39-209ENST00000428728 ARAP2Q8WZ64 1704 aa21.66■■□□□ 1.06
TRIM39-209ENST00000428728 ZNF157P51786 506 aaPredicted RBP21.65■■□□□ 1.06
TRIM39-209ENST00000428728 TAF7LQ5H9L4 462 aa21.65■■□□□ 1.06
TRIM39-209ENST00000428728 TTLL5Q6EMB2 1281 aa21.65■■□□□ 1.06
TRIM39-209ENST00000428728 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
TRIM39-209ENST00000428728 FAM155AB1AL88 458 aaPredicted RBP21.64■■□□□ 1.05
TRIM39-209ENST00000428728 CA12O43570 354 aa21.64■■□□□ 1.05
TRIM39-209ENST00000428728 SASH1O94885 1247 aa21.64■■□□□ 1.05
TRIM39-209ENST00000428728 GTF2IP78347 998 aa21.64■■□□□ 1.05
TRIM39-209ENST00000428728 KIAA0825Q8IV33 1275 aa21.64■■□□□ 1.05
TRIM39-209ENST00000428728 SRCIN1Q9C0H9 1055 aa21.64■■□□□ 1.05
TRIM39-209ENST00000428728 ALDH1L1O75891 902 aa21.63■■□□□ 1.05
TRIM39-209ENST00000428728 CCDC57Q2TAC2 916 aa21.63■■□□□ 1.05
TRIM39-209ENST00000428728 IRS2Q9Y4H2 1338 aa21.62■■□□□ 1.05
TRIM39-209ENST00000428728 WNT10BO00744 389 aa21.62■■□□□ 1.05
TRIM39-209ENST00000428728 CD209Q9NNX6 404 aa21.62■■□□□ 1.05
TRIM39-209ENST00000428728 CNNM1Q9NRU3 951 aa21.62■■□□□ 1.05
TRIM39-209ENST00000428728 PLIN1O60240 522 aa21.61■■□□□ 1.05
TRIM39-209ENST00000428728 SLC10A3P09131 477 aa21.61■■□□□ 1.05
TRIM39-209ENST00000428728 PRAMEF18Q5VWM3 479 aa21.61■■□□□ 1.05
TRIM39-209ENST00000428728 CCDC102AQ96A19 550 aa21.61■■□□□ 1.05
TRIM39-209ENST00000428728 ABHD8Q96I13 439 aa21.61■■□□□ 1.05
TRIM39-209ENST00000428728 HDAC9Q9UKV0 1011 aa21.61■■□□□ 1.05
TRIM39-209ENST00000428728 KIF23Q02241 960 aaPredicted RBP21.6■■□□□ 1.05
TRIM39-209ENST00000428728 LDHAL6AQ6ZMR3 332 aa21.6■■□□□ 1.05
TRIM39-209ENST00000428728 MOB2Q70IA6 237 aa21.6■■□□□ 1.05
TRIM39-209ENST00000428728 ZNF804AQ7Z570 1209 aa21.6■■□□□ 1.05
TRIM39-209ENST00000428728 SUCLG2Q96I99 432 aa21.6■■□□□ 1.05
TRIM39-209ENST00000428728 MYH13Q9UKX3 1938 aa21.59■■□□□ 1.05
TRIM39-209ENST00000428728 RASAL3Q86YV0 1011 aa21.59■■□□□ 1.05
TRIM39-209ENST00000428728 FKBP1BP68106 108 aa21.58■■□□□ 1.05
TRIM39-209ENST00000428728 TTLL12Q14166 644 aaPredicted RBP21.58■■□□□ 1.05
TRIM39-209ENST00000428728 C15orf52Q6ZUT6 534 aaKnown RBP21.58■■□□□ 1.05
TRIM39-209ENST00000428728 MRPL50Q8N5N7 158 aaKnown RBP21.58■■□□□ 1.05
TRIM39-209ENST00000428728 JAG2Q9Y219 1238 aa21.58■■□□□ 1.05
TRIM39-209ENST00000428728 E9PSI1 815 aa21.57■■□□□ 1.04
TRIM39-209ENST00000428728 NBPF7P0C2Y1 421 aaPredicted RBP21.57■■□□□ 1.04
TRIM39-209ENST00000428728 CERS5Q8N5B7 392 aa21.57■■□□□ 1.04
TRIM39-209ENST00000428728 F8W031 263 aaPredicted RBP21.56■■□□□ 1.04
TRIM39-209ENST00000428728 APOBEC3FQ8IUX4 373 aaKnown RBP21.56■■□□□ 1.04
TRIM39-209ENST00000428728 KAZALD1Q96I82 304 aa21.56■■□□□ 1.04
TRIM39-209ENST00000428728 UBE2Q2LH0YL09 131 aa21.55■■□□□ 1.04
TRIM39-209ENST00000428728 NF2P35240 595 aa21.55■■□□□ 1.04
TRIM39-209ENST00000428728 MMP14P50281 582 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms