RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 GYS1P13807 737 aa8.55□□□□□ -1.04
CNOT4-206ENST00000428680 FOXD4L6Q3SYB3 417 aaPredicted RBP8.55□□□□□ -1.04
CNOT4-206ENST00000428680 FOXD4L3Q6VB84 417 aaPredicted RBP8.55□□□□□ -1.04
CNOT4-206ENST00000428680 DNAAF4Q8WXU2 420 aa8.55□□□□□ -1.04
CNOT4-206ENST00000428680 ARHGEF1Q92888 912 aaKnown RBP8.55□□□□□ -1.04
CNOT4-206ENST00000428680 BMP2KQ9NSY1 1161 aaPredicted RBP8.55□□□□□ -1.04
CNOT4-206ENST00000428680 RANBP6O60518 1105 aaKnown RBP8.55□□□□□ -1.04
CNOT4-206ENST00000428680 LDHDQ86WU2 507 aa8.55□□□□□ -1.04
CNOT4-206ENST00000428680 IQCA1Q86XH1 822 aa8.55□□□□□ -1.04
CNOT4-206ENST00000428680 DCPSQ96C86 337 aaKnown RBP8.55□□□□□ -1.04
CNOT4-206ENST00000428680 TAOK3Q9H2K8 898 aa8.55□□□□□ -1.04
CNOT4-206ENST00000428680 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
CNOT4-206ENST00000428680 NRXN2Q9P2S2 1712 aa8.55□□□□□ -1.04
CNOT4-206ENST00000428680 BECN2A8MW95 431 aa8.55□□□□□ -1.04
CNOT4-206ENST00000428680 PRDM10Q9NQV6 1147 aa8.55□□□□□ -1.04
CNOT4-206ENST00000428680 GPHNQ9NQX3 736 aaPredicted RBP8.55□□□□□ -1.04
CNOT4-206ENST00000428680 MVPQ14764 893 aaKnown RBP8.55□□□□□ -1.04
CNOT4-206ENST00000428680 CEMIPQ8WUJ3 1361 aa8.55□□□□□ -1.04
CNOT4-206ENST00000428680 WDR90Q96KV7 1748 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 GLTPD2A6NH11 291 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 TRAF1Q13077 416 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 PRKAG2Q9UGJ0 569 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 CSADQ9Y600 493 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 SERPINB2P05120 415 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 TM4SF1P30408 202 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 PICALMQ13492 652 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 NUTM1Q86Y26 1132 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 LRRCC1Q9C099 1032 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 RNF181Q9P0P0 153 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 SMC3Q9UQE7 1217 aa8.54□□□□□ -1.04
CNOT4-206ENST00000428680 CHADLQ6NUI6 762 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 JMYQ8N9B5 988 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 ANKRD2Q9GZV1 360 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 TMOD4Q9NZQ9 345 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 IQSEC3Q9UPP2 1182 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-206ENST00000428680 UFL1O94874 794 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 C9orf131Q5VYM1 1079 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 N4BP2Q86UW6 1770 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-206ENST00000428680 CYP19A1P11511 503 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-206ENST00000428680 TMPOP42166 694 aaKnown RBP8.53□□□□□ -1.04
CNOT4-206ENST00000428680 MAP2K1Q02750 393 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-206ENST00000428680 SYCP1Q15431 976 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 PPP4R3BQ5MIZ7 849 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 TRMT1LQ7Z2T5 733 aaKnown RBP8.53□□□□□ -1.04
CNOT4-206ENST00000428680 CTCFLQ8NI51 663 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-206ENST00000428680 BICD2Q8TD16 824 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 KLRG1Q96E93 195 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 PPP1R12BO60237 982 aaPredicted RBP8.53□□□□□ -1.04
CNOT4-206ENST00000428680 COPS6Q7L5N1 327 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 HHIPL1Q96JK4 782 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 PSMD1Q99460 953 aa8.53□□□□□ -1.04
CNOT4-206ENST00000428680 XAGE3Q8WTP9 111 aa8.52□□□□□ -1.04
CNOT4-206ENST00000428680 CARD14Q9BXL6 1004 aa8.52□□□□□ -1.04
CNOT4-206ENST00000428680 SPC25Q9HBM1 224 aa8.52□□□□□ -1.04
CNOT4-206ENST00000428680 CREBZFQ9NS37 354 aa8.52□□□□□ -1.04
CNOT4-206ENST00000428680 TJP1Q07157 1748 aa8.52□□□□□ -1.04
CNOT4-206ENST00000428680 L3MBTL3Q96JM7 780 aaPredicted RBP8.52□□□□□ -1.05
CNOT4-206ENST00000428680 CRAMP1Q96RY5 1269 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 CRNKL1Q9BZJ0 848 aaKnown RBP8.52□□□□□ -1.05
CNOT4-206ENST00000428680 LAMB4A4D0S4 1761 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 UBR2Q8IWV8 1755 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 DPEP1P16444 411 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 PDE4BQ07343 736 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 IL1RAPL2Q9NP60 686 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 RBM27Q9P2N5 1060 aaKnown RBP8.52□□□□□ -1.05
CNOT4-206ENST00000428680 GGA1Q9UJY5 639 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 RGPD2P0DJD1 1756 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 POLRMTO00411 1230 aaKnown RBP8.52□□□□□ -1.05
CNOT4-206ENST00000428680 NEBLO76041 1014 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 PLCG2P16885 1265 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 DESP17661 470 aa8.52□□□□□ -1.05
CNOT4-206ENST00000428680 RNF41Q9H4P4 317 aaPredicted RBP8.52□□□□□ -1.05
CNOT4-206ENST00000428680 GOLGA6L19H0YKK7 550 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 CTCFP49711 727 aaPredicted RBP8.51□□□□□ -1.05
CNOT4-206ENST00000428680 IMMTQ16891 758 aaKnown RBP8.51□□□□□ -1.05
CNOT4-206ENST00000428680 CKAP2LQ8IYA6 745 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 C1orf115Q9H7X2 142 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 ANXA1P04083 346 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 UQCRFS1P1P0C7P4 283 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 TNFAIP1Q13829 316 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 DLGAP5Q15398 846 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 ZNF790Q6PG37 636 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 HACL1Q9UJ83 578 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 NOL7Q9UMY1 257 aaKnown RBP8.51□□□□□ -1.05
CNOT4-206ENST00000428680 STX8Q9UNK0 236 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 MAP3K2Q9Y2U5 619 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 UNCXA6NJT0 531 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 TSPY2A6NKD2 308 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 LPXNO60711 386 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 GLRX3O76003 335 aaKnown RBP8.51□□□□□ -1.05
CNOT4-206ENST00000428680 PTMSP20962 102 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 RPS12P25398 132 aaKnown RBP8.51□□□□□ -1.05
CNOT4-206ENST00000428680 EIF5P55010 431 aaKnown RBP8.51□□□□□ -1.05
CNOT4-206ENST00000428680 USP50Q70EL3 339 aaPredicted RBP8.51□□□□□ -1.05
CNOT4-206ENST00000428680 MPNDQ8N594 471 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 ASAP1Q9ULH1 1129 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 SCN4AP35499 1836 aa8.51□□□□□ -1.05
CNOT4-206ENST00000428680 IRS4O14654 1257 aaPredicted RBP8.5□□□□□ -1.05
CNOT4-206ENST00000428680 CCDC73Q6ZRK6 1079 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 PANK1Q8TE04 598 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms