RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 PODNQ7Z5L7 613 aa10.53□□□□□ -0.72
CSTF1-203ENST00000428552 ZBTB38Q8NAP3 1195 aaPredicted RBP10.53□□□□□ -0.72
CSTF1-203ENST00000428552 ZBED3Q96IU2 234 aaPredicted RBP10.53□□□□□ -0.72
CSTF1-203ENST00000428552 IGF2BP3O00425 579 aaKnown RBP eCLIP10.52□□□□□ -0.73
CSTF1-203ENST00000428552 SASH1O94885 1247 aa10.52□□□□□ -0.73
CSTF1-203ENST00000428552 TRIM35Q9UPQ4 493 aa10.52□□□□□ -0.73
CSTF1-203ENST00000428552 TRIM17Q9Y577 477 aa10.52□□□□□ -0.73
CSTF1-203ENST00000428552 XDHP47989 1333 aa10.52□□□□□ -0.73
CSTF1-203ENST00000428552 MED23Q9ULK4 1368 aa10.52□□□□□ -0.73
CSTF1-203ENST00000428552 G3V3G9 751 aa10.51□□□□□ -0.73
CSTF1-203ENST00000428552 HOXB7P09629 217 aa10.51□□□□□ -0.73
CSTF1-203ENST00000428552 EN2P19622 333 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-203ENST00000428552 PRKG1Q13976 671 aa10.51□□□□□ -0.73
CSTF1-203ENST00000428552 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-203ENST00000428552 DCAF8Q5TAQ9 597 aa10.51□□□□□ -0.73
CSTF1-203ENST00000428552 TXNRD3Q86VQ6 643 aa10.51□□□□□ -0.73
CSTF1-203ENST00000428552 IFNL1Q8IU54 200 aa10.51□□□□□ -0.73
CSTF1-203ENST00000428552 JARID2Q92833 1246 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-203ENST00000428552 ARMC5Q96C12 935 aa10.51□□□□□ -0.73
CSTF1-203ENST00000428552 CCDC85AQ96PX6 553 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-203ENST00000428552 DBF4Q9UBU7 674 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-203ENST00000428552 PCCAP05165 728 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-203ENST00000428552 ATP2B4P23634 1241 aa10.5□□□□□ -0.73
CSTF1-203ENST00000428552 MAP3K11Q16584 847 aa10.5□□□□□ -0.73
CSTF1-203ENST00000428552 INTS3Q68E01 1043 aaKnown RBP10.5□□□□□ -0.73
CSTF1-203ENST00000428552 CLMNQ96JQ2 1002 aa10.5□□□□□ -0.73
CSTF1-203ENST00000428552 PNNQ9H307 717 aaKnown RBP10.5□□□□□ -0.73
CSTF1-203ENST00000428552 PHAXQ9H814 394 aaKnown RBP10.5□□□□□ -0.73
CSTF1-203ENST00000428552 FOXD4L1Q9NU39 408 aa10.5□□□□□ -0.73
CSTF1-203ENST00000428552 HYPKQ9NX55 129 aa10.5□□□□□ -0.73
CSTF1-203ENST00000428552 COLQQ9Y215 455 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-203ENST00000428552 PTPN22Q9Y2R2 807 aa10.5□□□□□ -0.73
CSTF1-203ENST00000428552 SPEF2Q9C093 1822 aa10.49□□□□□ -0.73
CSTF1-203ENST00000428552 PDE8AO60658 829 aa10.49□□□□□ -0.73
CSTF1-203ENST00000428552 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
CSTF1-203ENST00000428552 KLRK1P26718 216 aa10.49□□□□□ -0.73
CSTF1-203ENST00000428552 GJA5P36382 358 aa10.49□□□□□ -0.73
CSTF1-203ENST00000428552 CCDC152Q4G0S7 254 aa10.49□□□□□ -0.73
CSTF1-203ENST00000428552 STRIP1Q5VSL9 837 aa10.49□□□□□ -0.73
CSTF1-203ENST00000428552 ARMC9Q7Z3E5 817 aa10.49□□□□□ -0.73
CSTF1-203ENST00000428552 CD99L2Q8TCZ2 262 aa10.49□□□□□ -0.73
CSTF1-203ENST00000428552 ANGEL1Q9UNK9 670 aaKnown RBP10.49□□□□□ -0.73
CSTF1-203ENST00000428552 MINPP1Q9UNW1 487 aa10.49□□□□□ -0.73
CSTF1-203ENST00000428552 MANSC4A6NHS7 340 aaPredicted RBP10.48□□□□□ -0.73
CSTF1-203ENST00000428552 NF2P35240 595 aa10.48□□□□□ -0.73
CSTF1-203ENST00000428552 LMOD3Q0VAK6 560 aa10.48□□□□□ -0.73
CSTF1-203ENST00000428552 DUSP27Q5VZP5 1158 aa10.48□□□□□ -0.73
CSTF1-203ENST00000428552 ANKRD18AQ8IVF6 992 aa10.48□□□□□ -0.73
CSTF1-203ENST00000428552 CCDC191Q8NCU4 936 aa10.48□□□□□ -0.73
CSTF1-203ENST00000428552 WNK4Q96J92 1243 aa10.48□□□□□ -0.73
CSTF1-203ENST00000428552 MYD88Q99836 296 aa10.48□□□□□ -0.73
CSTF1-203ENST00000428552 PTPN18Q99952 460 aa10.48□□□□□ -0.73
CSTF1-203ENST00000428552 PCDHAC2Q9Y5I4 1007 aa10.48□□□□□ -0.73
CSTF1-203ENST00000428552 AOX1Q06278 1338 aa10.48□□□□□ -0.73
CSTF1-203ENST00000428552 COL1A1P02452 1464 aaPredicted RBP10.48□□□□□ -0.73
CSTF1-203ENST00000428552 ZBTB48P10074 688 aaPredicted RBP10.47□□□□□ -0.73
CSTF1-203ENST00000428552 CCT4P50991 539 aaKnown RBP10.47□□□□□ -0.73
CSTF1-203ENST00000428552 INHBEP58166 350 aa10.47□□□□□ -0.73
CSTF1-203ENST00000428552 CRHR2Q13324 411 aa10.47□□□□□ -0.73
CSTF1-203ENST00000428552 RIC3Q7Z5B4 369 aa10.47□□□□□ -0.73
CSTF1-203ENST00000428552 APOBEC3FQ8IUX4 373 aaKnown RBP10.47□□□□□ -0.73
CSTF1-203ENST00000428552 OGFOD1Q8N543 542 aa10.47□□□□□ -0.73
CSTF1-203ENST00000428552 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
CSTF1-203ENST00000428552 ZNF333Q96JL9 665 aa10.47□□□□□ -0.73
CSTF1-203ENST00000428552 COA1Q9GZY4 146 aa10.47□□□□□ -0.73
CSTF1-203ENST00000428552 BSDC1Q9NW68 430 aaPredicted RBP10.47□□□□□ -0.73
CSTF1-203ENST00000428552 LAS1LQ9Y4W2 734 aaKnown RBP10.47□□□□□ -0.73
CSTF1-203ENST00000428552 MYO3BQ8WXR4 1341 aa10.47□□□□□ -0.73
CSTF1-203ENST00000428552 IRS2Q9Y4H2 1338 aa10.47□□□□□ -0.73
CSTF1-203ENST00000428552 KIAA0100Q14667 2235 aaKnown RBP10.47□□□□□ -0.73
CSTF1-203ENST00000428552 RANBP2P49792 3224 aaKnown RBP10.47□□□□□ -0.73
CSTF1-203ENST00000428552 TESPA1A2RU30 521 aaPredicted RBP10.46□□□□□ -0.73
CSTF1-203ENST00000428552 CTSWP56202 376 aa10.46□□□□□ -0.73
CSTF1-203ENST00000428552 NEUROD2Q15784 382 aa10.46□□□□□ -0.73
CSTF1-203ENST00000428552 KIAA0825Q8IV33 1275 aa10.46□□□□□ -0.73
CSTF1-203ENST00000428552 CCDC146Q8IYE0 955 aa10.46□□□□□ -0.73
CSTF1-203ENST00000428552 CERS5Q8N5B7 392 aa10.46□□□□□ -0.73
CSTF1-203ENST00000428552 TTLL11Q8NHH1 800 aa10.46□□□□□ -0.73
CSTF1-203ENST00000428552 SLC10A4Q96EP9 437 aa10.46□□□□□ -0.73
CSTF1-203ENST00000428552 DEFB129Q9H1M3 183 aa10.46□□□□□ -0.73
CSTF1-203ENST00000428552 GREM2Q9H772 168 aa10.46□□□□□ -0.73
CSTF1-203ENST00000428552 MBIPQ9NS73 344 aa10.46□□□□□ -0.73
CSTF1-203ENST00000428552 CWC25Q9NXE8 425 aaPredicted RBP10.46□□□□□ -0.73
CSTF1-203ENST00000428552 OTOFQ9HC10 1997 aa10.46□□□□□ -0.74
CSTF1-203ENST00000428552 ECM29Q5VYK3 1845 aa10.45□□□□□ -0.74
CSTF1-203ENST00000428552 IGKV5-2P06315 115 aa10.45□□□□□ -0.74
CSTF1-203ENST00000428552 ZNF853P0CG23 659 aa10.45□□□□□ -0.74
CSTF1-203ENST00000428552 MMP14P50281 582 aa10.45□□□□□ -0.74
CSTF1-203ENST00000428552 GOLGA2Q08379 1002 aa10.45□□□□□ -0.74
CSTF1-203ENST00000428552 FBXW7Q969H0 707 aa10.45□□□□□ -0.74
CSTF1-203ENST00000428552 ERO1AQ96HE7 468 aa10.45□□□□□ -0.74
CSTF1-203ENST00000428552 METTL22Q9BUU2 404 aaPredicted RBP10.45□□□□□ -0.74
CSTF1-203ENST00000428552 EFCC1Q9HA90 598 aa10.45□□□□□ -0.74
CSTF1-203ENST00000428552 ZSWIM8A7E2V4 1837 aa10.44□□□□□ -0.74
CSTF1-203ENST00000428552 USP2O75604 605 aaPredicted RBP10.44□□□□□ -0.74
CSTF1-203ENST00000428552 HSP90B1P14625 803 aaKnown RBP10.44□□□□□ -0.74
CSTF1-203ENST00000428552 SP3Q02447 781 aa10.44□□□□□ -0.74
CSTF1-203ENST00000428552 NBPF12Q5TAG4 269 aaPredicted RBP10.44□□□□□ -0.74
CSTF1-203ENST00000428552 TTLL5Q6EMB2 1281 aa10.44□□□□□ -0.74
CSTF1-203ENST00000428552 MTMR14Q8NCE2 650 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms