RNA–Protein interactions for RNA: ENST00000427741.5

CNTN4-206, Transcript of contactin 4, humanhuman

TSL 2

Gene CNTN4, Length 3,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-206ENST00000427741 TFCP2Q12800 502 aa17.41■□□□□ 0.38
CNTN4-206ENST00000427741 ERCC6LQ2NKX8 1250 aa17.41■□□□□ 0.38
CNTN4-206ENST00000427741 ARMCX5Q6P1M9 558 aa17.41■□□□□ 0.38
CNTN4-206ENST00000427741 DHX32Q7L7V1 743 aaKnown RBP17.41■□□□□ 0.38
CNTN4-206ENST00000427741 DNAJC2Q99543 621 aaKnown RBP17.41■□□□□ 0.38
CNTN4-206ENST00000427741 NAT10Q9H0A0 1025 aaKnown RBP17.41■□□□□ 0.38
CNTN4-206ENST00000427741 NCOA5Q9HCD5 579 aaKnown RBP17.41■□□□□ 0.38
CNTN4-206ENST00000427741 PCDHA7Q9UN72 937 aa17.41■□□□□ 0.38
CNTN4-206ENST00000427741 H2AFXP16104 143 aaPredicted RBP17.4■□□□□ 0.38
CNTN4-206ENST00000427741 CCDC93Q567U6 631 aa17.4■□□□□ 0.38
CNTN4-206ENST00000427741 PLCD3Q8N3E9 789 aa17.4■□□□□ 0.38
CNTN4-206ENST00000427741 RFX7Q2KHR2 1363 aa17.4■□□□□ 0.38
CNTN4-206ENST00000427741 GCKRQ14397 625 aa17.4■□□□□ 0.38
CNTN4-206ENST00000427741 RIC3Q7Z5B4 369 aa17.4■□□□□ 0.38
CNTN4-206ENST00000427741 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
CNTN4-206ENST00000427741 EXOSC10Q01780 885 aaKnown RBP17.39■□□□□ 0.38
CNTN4-206ENST00000427741 DPCR1Q3MIW9 517 aa17.39■□□□□ 0.38
CNTN4-206ENST00000427741 C1orf141Q5JVX7 400 aa17.39■□□□□ 0.38
CNTN4-206ENST00000427741 XPO4Q9C0E2 1151 aaKnown RBP17.39■□□□□ 0.38
CNTN4-206ENST00000427741 A0A1B0GVL5 298 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 RFX5P48382 616 aaPredicted RBP17.39■□□□□ 0.37
CNTN4-206ENST00000427741 GORABQ5T7V8 394 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 SYT10Q6XYQ8 523 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 DDX46Q7L014 1031 aaKnown RBP17.39■□□□□ 0.37
CNTN4-206ENST00000427741 MRPS27Q92552 414 aaKnown RBP17.39■□□□□ 0.37
CNTN4-206ENST00000427741 AGXT2Q9BYV1 514 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 NEDD4P46934 1319 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 LAMA4Q16363 1823 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 CCDC66A2RUB6 948 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.37
CNTN4-206ENST00000427741 PTPN12Q05209 780 aaKnown RBP17.39■□□□□ 0.37
CNTN4-206ENST00000427741 AMOTQ4VCS5 1084 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 HAUS7Q99871 368 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 DBNDD2Q9BQY9 259 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 NAP1L2Q9ULW6 460 aaPredicted RBP17.39■□□□□ 0.37
CNTN4-206ENST00000427741 ABCC6O95255 1503 aa17.39■□□□□ 0.37
CNTN4-206ENST00000427741 NDUFA8P51970 172 aa17.38■□□□□ 0.37
CNTN4-206ENST00000427741 TIGD1Q96MW7 591 aa17.38■□□□□ 0.37
CNTN4-206ENST00000427741 SDF4Q9BRK5 362 aa17.38■□□□□ 0.37
CNTN4-206ENST00000427741 A0A0G2JLW4 131 aa17.38■□□□□ 0.37
CNTN4-206ENST00000427741 CEBPAP49715 358 aaPredicted RBP17.38■□□□□ 0.37
CNTN4-206ENST00000427741 PDE4CQ08493 712 aa17.38■□□□□ 0.37
CNTN4-206ENST00000427741 TMC6Q7Z403 805 aa17.38■□□□□ 0.37
CNTN4-206ENST00000427741 IFNKQ9P0W0 207 aa17.38■□□□□ 0.37
CNTN4-206ENST00000427741 KIAA1468Q9P260 1216 aa17.38■□□□□ 0.37
CNTN4-206ENST00000427741 OVOS2A0A0G2JMS6 1433 aa17.37■□□□□ 0.37
CNTN4-206ENST00000427741 ADALQ6DHV7 355 aa17.37■□□□□ 0.37
CNTN4-206ENST00000427741 PSDA5PKW4 1024 aaPredicted RBP17.37■□□□□ 0.37
CNTN4-206ENST00000427741 KCNA6P17658 529 aa17.37■□□□□ 0.37
CNTN4-206ENST00000427741 BPIFA3Q9BQP9 254 aa17.37■□□□□ 0.37
CNTN4-206ENST00000427741 FHOD1Q9Y613 1164 aa17.37■□□□□ 0.37
CNTN4-206ENST00000427741 ARHGAP23Q9P227 1491 aa17.37■□□□□ 0.37
CNTN4-206ENST00000427741 SMC2O95347 1197 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 CCDC150Q8NCX0 1101 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 FDPSP14324 419 aaKnown RBP17.36■□□□□ 0.37
CNTN4-206ENST00000427741 PDIA3P30101 505 aaKnown RBP17.36■□□□□ 0.37
CNTN4-206ENST00000427741 MYD88Q99836 296 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 CARMIL3Q8ND23 1372 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 A0A1W2PQ27 194 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 A0A1W2PQ64 194 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 A0A1W2PQD8 194 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 CLCN6P51797 869 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 NEXNQ0ZGT2 675 aa17.36■□□□□ 0.37
CNTN4-206ENST00000427741 MYL6BP14649 208 aa17.35■□□□□ 0.37
CNTN4-206ENST00000427741 SFPQP23246 707 aaKnown RBP eCLIP17.35■□□□□ 0.37
CNTN4-206ENST00000427741 KCNJ6P48051 423 aa17.35■□□□□ 0.37
CNTN4-206ENST00000427741 BMS1Q14692 1282 aaKnown RBP17.35■□□□□ 0.37
CNTN4-206ENST00000427741 KBTBD3Q8NAB2 608 aa17.35■□□□□ 0.37
CNTN4-206ENST00000427741 NOL10Q9BSC4 688 aaKnown RBP17.35■□□□□ 0.37
CNTN4-206ENST00000427741 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.35■□□□□ 0.37
CNTN4-206ENST00000427741 CHST3Q7LGC8 479 aa17.35■□□□□ 0.37
CNTN4-206ENST00000427741 LINC00301Q8NCQ3 95 aa17.35■□□□□ 0.37
CNTN4-206ENST00000427741 CLIC4Q9Y696 253 aa17.35■□□□□ 0.37
CNTN4-206ENST00000427741 E7EWF7 191 aa17.34■□□□□ 0.37
CNTN4-206ENST00000427741 POLR3GO15318 223 aaPredicted RBP17.34■□□□□ 0.37
CNTN4-206ENST00000427741 NCAPHQ15003 741 aa17.34■□□□□ 0.37
CNTN4-206ENST00000427741 XAGE3Q8WTP9 111 aa17.34■□□□□ 0.37
CNTN4-206ENST00000427741 METTL22Q9BUU2 404 aaPredicted RBP17.34■□□□□ 0.37
CNTN4-206ENST00000427741 PHF8Q9UPP1 1060 aa17.34■□□□□ 0.37
CNTN4-206ENST00000427741 CAPN2P17655 700 aa17.34■□□□□ 0.37
CNTN4-206ENST00000427741 SIPA1L3O60292 1781 aaPredicted RBP17.34■□□□□ 0.37
CNTN4-206ENST00000427741 COPS6Q7L5N1 327 aa17.34■□□□□ 0.37
CNTN4-206ENST00000427741 ZBTB9Q96C00 473 aa17.34■□□□□ 0.37
CNTN4-206ENST00000427741 ZNF274Q96GC6 653 aaPredicted RBP17.34■□□□□ 0.37
CNTN4-206ENST00000427741 BIN1O00499 593 aa17.33■□□□□ 0.37
CNTN4-206ENST00000427741 OTUD7BQ6GQQ9 843 aa17.33■□□□□ 0.37
CNTN4-206ENST00000427741 FMNL2Q96PY5 1086 aa17.33■□□□□ 0.37
CNTN4-206ENST00000427741 DSCC1Q9BVC3 393 aa17.33■□□□□ 0.37
CNTN4-206ENST00000427741 CCDC9Q9Y3X0 531 aaKnown RBP17.33■□□□□ 0.37
CNTN4-206ENST00000427741 FAM193AP78312 1265 aa17.33■□□□□ 0.36
CNTN4-206ENST00000427741 ARHGAP29Q52LW3 1261 aa17.33■□□□□ 0.36
CNTN4-206ENST00000427741 HNRNPH2P55795 449 aaKnown RBP17.32■□□□□ 0.36
CNTN4-206ENST00000427741 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
CNTN4-206ENST00000427741 PNMA6AP0CW24 399 aaPredicted RBP17.32■□□□□ 0.36
CNTN4-206ENST00000427741 RABL6Q3YEC7 729 aaPredicted RBP17.32■□□□□ 0.36
CNTN4-206ENST00000427741 FANCGO15287 622 aa17.32■□□□□ 0.36
CNTN4-206ENST00000427741 PLA2G4AP47712 749 aa17.32■□□□□ 0.36
CNTN4-206ENST00000427741 NLRP12P59046 1061 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms