RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 SF3B3Q15393 1217 aaKnown RBP10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 CRY2Q49AN0 593 aa10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 TAF7LQ5H9L4 462 aa10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 RHPN1Q8TCX5 695 aa10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 JDP2Q8WYK2 163 aa10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 RPGRQ92834 1020 aaKnown RBP10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 LNPKQ9C0E8 428 aa10.16□□□□□ -0.78
SMARCAL1-206ENST00000427645 RTL9Q8NET4 1388 aa10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 TRAF5O00463 557 aa10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 HCLS1P14317 486 aaPredicted RBP10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 ITGA6P23229 1130 aa10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 IL15P40933 162 aaPredicted RBP10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 PNMA8AQ86V59 439 aaPredicted RBP10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 GPC2Q8N158 579 aa10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 CLASRPQ8N2M8 674 aaKnown RBP10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 LARGE2Q8N3Y3 721 aa10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 ABT1Q9ULW3 272 aaKnown RBP10.15□□□□□ -0.78
SMARCAL1-206ENST00000427645 SNED1Q8TER0 1413 aa10.15□□□□□ -0.79
SMARCAL1-206ENST00000427645 EYA2O00167 538 aa10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 APBB1O00213 710 aa10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 RGS3P49796 1198 aa10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 SCNN1DP51172 638 aa10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 EIF6P56537 245 aaKnown RBP10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 DEFB115Q30KQ5 88 aa10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 AIDAQ96BJ3 306 aa10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 CDC5LQ99459 802 aaKnown RBP10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 PSMD1Q99460 953 aa10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 GREM2Q9H772 168 aa10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 WBP1LQ9NX94 342 aa10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 PA2G4Q9UQ80 394 aaKnown RBP10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 LAMB2P55268 1798 aa10.14□□□□□ -0.79
SMARCAL1-206ENST00000427645 WDR33Q9C0J8 1336 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 RASSF10A6NK89 507 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 HOXA10P31260 410 aaPredicted RBP10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 IGHMBP2P38935 993 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 CTCFP49711 727 aaPredicted RBP10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 AOC3Q16853 763 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 FAM161AQ3B820 660 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 LDHAL6AQ6ZMR3 332 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 PAXIP1Q6ZW49 1069 aaPredicted RBP10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 RBM17Q96I25 401 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 MPHOSPH8Q99549 860 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 SIL1Q9H173 461 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 OSBPL3Q9H4L5 887 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 GPR108Q9NPR9 543 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 AKAP2Q9Y2D5 859 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 SSUH2Q9Y2M2 353 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 RIC1Q4ADV7 1423 aa10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 DDX60Q8IY21 1712 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-206ENST00000427645 PPIP5K2O43314 1243 aa10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 SMARCA5O60264 1052 aaPredicted RBP10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 SASH1O94885 1247 aa10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 IFIT2P09913 472 aaKnown RBP10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 LMOD1P29536 600 aaPredicted RBP10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 CST9Q5W186 159 aa10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 CYP4F22Q6NT55 531 aa10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 DDX46Q7L014 1031 aaKnown RBP10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 KLHDC4Q8TBB5 520 aa10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 GPATCH3Q96I76 525 aa10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 PRDM10Q9NQV6 1147 aa10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 CNNM1Q9NRU3 951 aa10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 CEP126Q9P2H0 1117 aa10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 TSKSQ9UJT2 592 aa10.12□□□□□ -0.79
SMARCAL1-206ENST00000427645 MROH5Q6ZUA9 1318 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 LTBP1Q14766 1721 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 HSPA8P11142 646 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 PDE4AP27815 886 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 CC2D2BQ6DHV5 1058 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 ATG9AQ7Z3C6 839 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 ANKRD18AQ8IVF6 992 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 PLEKHM2Q8IWE5 1019 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 NIM1KQ8IY84 436 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 ZNF594Q96JF6 807 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 CCDC85AQ96PX6 553 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 CRAMP1Q96RY5 1269 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 IL1RAPL2Q9NP60 686 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 RIPOR2Q9Y4F9 1068 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 SCN4AP35499 1836 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 ADAMTSL1Q8N6G6 1762 aa10.11□□□□□ -0.79
SMARCAL1-206ENST00000427645 AOC2O75106 756 aa10.1□□□□□ -0.79
SMARCAL1-206ENST00000427645 MX1P20591 662 aa10.1□□□□□ -0.79
SMARCAL1-206ENST00000427645 PDE1AP54750 535 aa10.1□□□□□ -0.79
SMARCAL1-206ENST00000427645 RPS8P62241 208 aaKnown RBP10.1□□□□□ -0.79
SMARCAL1-206ENST00000427645 CXCL9Q07325 125 aa10.1□□□□□ -0.79
SMARCAL1-206ENST00000427645 LRRC24Q50LG9 513 aa10.1□□□□□ -0.79
SMARCAL1-206ENST00000427645 DLK2Q6UY11 383 aa10.1□□□□□ -0.79
SMARCAL1-206ENST00000427645 BSDC1Q9NW68 430 aaPredicted RBP10.1□□□□□ -0.79
SMARCAL1-206ENST00000427645 STAP2Q9UGK3 403 aa10.1□□□□□ -0.79
SMARCAL1-206ENST00000427645 ATP6V0A2Q9Y487 856 aa10.1□□□□□ -0.79
SMARCAL1-206ENST00000427645 AOX1Q06278 1338 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 TTC41PQ6P2S7 1318 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 SHTN1A0MZ66 631 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 ERC2O15083 957 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 EIF5BO60841 1220 aaKnown RBP10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 BBOX1O75936 387 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 RAD17O75943 681 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 PDE8BO95263 885 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 GMPSP49915 693 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms