RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 TAF5LO75529 589 aa23.23■■□□□ 1.31
GPC1-205ENST00000427506 EGFRP00533 1210 aa23.23■■□□□ 1.31
GPC1-205ENST00000427506 VEGFBP49765 207 aa23.23■■□□□ 1.31
GPC1-205ENST00000427506 ZNF408Q9H9D4 720 aa23.23■■□□□ 1.31
GPC1-205ENST00000427506 RASSF10A6NK89 507 aa23.22■■□□□ 1.31
GPC1-205ENST00000427506 PLIN1O60240 522 aa23.22■■□□□ 1.31
GPC1-205ENST00000427506 CELF2O95319 508 aaKnown RBP23.22■■□□□ 1.31
GPC1-205ENST00000427506 HSPA1AP0DMV8 641 aaKnown RBP23.22■■□□□ 1.31
GPC1-205ENST00000427506 HSPA1BP0DMV9 641 aaKnown RBP23.22■■□□□ 1.31
GPC1-205ENST00000427506 KLRK1P26718 216 aa23.22■■□□□ 1.31
GPC1-205ENST00000427506 CST9Q5W186 159 aa23.22■■□□□ 1.31
GPC1-205ENST00000427506 PAXIP1Q6ZW49 1069 aaPredicted RBP23.22■■□□□ 1.31
GPC1-205ENST00000427506 USP48Q86UV5 1035 aa23.22■■□□□ 1.31
GPC1-205ENST00000427506 DCPSQ96C86 337 aaKnown RBP23.22■■□□□ 1.31
GPC1-205ENST00000427506 UTYO14607 1347 aa23.22■■□□□ 1.31
GPC1-205ENST00000427506 USP17L8P0C7I0 530 aa23.21■■□□□ 1.31
GPC1-205ENST00000427506 SNAP23O00161 211 aa23.2■■□□□ 1.3
GPC1-205ENST00000427506 KAZALD1Q96I82 304 aa23.2■■□□□ 1.3
GPC1-205ENST00000427506 BICC1Q9H694 974 aaKnown RBP23.2■■□□□ 1.3
GPC1-205ENST00000427506 ZNF280AP59817 542 aaPredicted RBP23.19■■□□□ 1.3
GPC1-205ENST00000427506 STRIP1Q5VSL9 837 aa23.19■■□□□ 1.3
GPC1-205ENST00000427506 KRT26Q7Z3Y9 468 aa23.19■■□□□ 1.3
GPC1-205ENST00000427506 GMLQ99445 158 aa23.19■■□□□ 1.3
GPC1-205ENST00000427506 NOB1Q9ULX3 412 aaKnown RBP23.19■■□□□ 1.3
GPC1-205ENST00000427506 ZNF609O15014 1411 aa23.18■■□□□ 1.3
GPC1-205ENST00000427506 DACT2Q5SW24 774 aa23.18■■□□□ 1.3
GPC1-205ENST00000427506 TTLL5Q6EMB2 1281 aa23.18■■□□□ 1.3
GPC1-205ENST00000427506 MXD3Q9BW11 206 aa23.18■■□□□ 1.3
GPC1-205ENST00000427506 MYOZ2Q9NPC6 264 aa23.18■■□□□ 1.3
GPC1-205ENST00000427506 TLL2Q9Y6L7 1015 aa23.18■■□□□ 1.3
GPC1-205ENST00000427506 MYO3BQ8WXR4 1341 aa23.17■■□□□ 1.3
GPC1-205ENST00000427506 WDR33Q9C0J8 1336 aaKnown RBP23.17■■□□□ 1.3
GPC1-205ENST00000427506 GRM1Q13255 1194 aa23.17■■□□□ 1.3
GPC1-205ENST00000427506 OGFOD1Q8N543 542 aa23.17■■□□□ 1.3
GPC1-205ENST00000427506 USP44Q9H0E7 712 aa23.17■■□□□ 1.3
GPC1-205ENST00000427506 CD209Q9NNX6 404 aa23.17■■□□□ 1.3
GPC1-205ENST00000427506 GGA3Q9NZ52 723 aa23.17■■□□□ 1.3
GPC1-205ENST00000427506 TRPM7Q96QT4 1865 aa23.16■■□□□ 1.3
GPC1-205ENST00000427506 GTF2IP78347 998 aa23.16■■□□□ 1.3
GPC1-205ENST00000427506 SCARF1Q14162 830 aa23.16■■□□□ 1.3
GPC1-205ENST00000427506 ZNF804AQ7Z570 1209 aa23.16■■□□□ 1.3
GPC1-205ENST00000427506 SULF1Q8IWU6 871 aa23.16■■□□□ 1.3
GPC1-205ENST00000427506 API5Q9BZZ5 524 aaKnown RBP23.16■■□□□ 1.3
GPC1-205ENST00000427506 PSME4Q14997 1843 aa23.16■■□□□ 1.3
GPC1-205ENST00000427506 ADM5C9JUS6 153 aa23.15■■□□□ 1.3
GPC1-205ENST00000427506 ECE1P42892 770 aa23.15■■□□□ 1.3
GPC1-205ENST00000427506 RABL6Q3YEC7 729 aaPredicted RBP23.15■■□□□ 1.3
GPC1-205ENST00000427506 DLK2Q6UY11 383 aa23.15■■□□□ 1.3
GPC1-205ENST00000427506 C15orf52Q6ZUT6 534 aaKnown RBP23.15■■□□□ 1.3
GPC1-205ENST00000427506 PUS3Q9BZE2 481 aaKnown RBP23.15■■□□□ 1.3
GPC1-205ENST00000427506 ASTN2O75129 1339 aaPredicted RBP23.14■■□□□ 1.3
GPC1-205ENST00000427506 RARSP54136 660 aaKnown RBP23.14■■□□□ 1.29
GPC1-205ENST00000427506 HNRNPUQ00839 825 aaKnown RBP eCLIP23.14■■□□□ 1.29
GPC1-205ENST00000427506 ANGEL2Q5VTE6 544 aaKnown RBP23.14■■□□□ 1.29
GPC1-205ENST00000427506 CYP4F22Q6NT55 531 aa23.14■■□□□ 1.29
GPC1-205ENST00000427506 ANKRD44Q8N8A2 993 aa23.14■■□□□ 1.29
GPC1-205ENST00000427506 CAPNS2Q96L46 248 aa23.14■■□□□ 1.29
GPC1-205ENST00000427506 SAPCD2Q86UD0 394 aa23.13■■□□□ 1.29
GPC1-205ENST00000427506 AIDAQ96BJ3 306 aa23.13■■□□□ 1.29
GPC1-205ENST00000427506 IRS2Q9Y4H2 1338 aa23.12■■□□□ 1.29
GPC1-205ENST00000427506 BRPF1P55201 1214 aaPredicted RBP23.12■■□□□ 1.29
GPC1-205ENST00000427506 KIAA0825Q8IV33 1275 aa23.12■■□□□ 1.29
GPC1-205ENST00000427506 HDAC9Q9UKV0 1011 aa23.12■■□□□ 1.29
GPC1-205ENST00000427506 MROH5Q6ZUA9 1318 aa23.11■■□□□ 1.29
GPC1-205ENST00000427506 KIF16BQ96L93 1317 aa23.11■■□□□ 1.29
GPC1-205ENST00000427506 UBE4AQ14139 1066 aa23.11■■□□□ 1.29
GPC1-205ENST00000427506 RIPOR2Q9Y4F9 1068 aa23.11■■□□□ 1.29
GPC1-205ENST00000427506 UBTFL1P0CB47 393 aaPredicted RBP23.1■■□□□ 1.29
GPC1-205ENST00000427506 METTL24Q5JXM2 366 aa23.1■■□□□ 1.29
GPC1-205ENST00000427506 C2orf69Q8N8R5 385 aa23.1■■□□□ 1.29
GPC1-205ENST00000427506 A0A1B0GUL6 1792 aa23.09■■□□□ 1.29
GPC1-205ENST00000427506 IL1R1P14778 569 aa23.09■■□□□ 1.29
GPC1-205ENST00000427506 MMP14P50281 582 aa23.09■■□□□ 1.29
GPC1-205ENST00000427506 MAP2K1Q02750 393 aaPredicted RBP23.09■■□□□ 1.29
GPC1-205ENST00000427506 NBPF9Q3BBW0 867 aa23.09■■□□□ 1.29
GPC1-205ENST00000427506 LRRC24Q50LG9 513 aa23.09■■□□□ 1.29
GPC1-205ENST00000427506 COL13A1Q5TAT6 717 aaPredicted RBP23.09■■□□□ 1.29
GPC1-205ENST00000427506 KLHDC4Q8TBB5 520 aa23.09■■□□□ 1.29
GPC1-205ENST00000427506 GBA2Q9HCG7 927 aaPredicted RBP23.09■■□□□ 1.29
GPC1-205ENST00000427506 HUNKP57058 714 aa23.08■■□□□ 1.29
GPC1-205ENST00000427506 CDCA5Q96FF9 252 aa23.08■■□□□ 1.29
GPC1-205ENST00000427506 HHIPL1Q96JK4 782 aa23.08■■□□□ 1.29
GPC1-205ENST00000427506 PITPNM2Q9BZ72 1349 aa23.08■■□□□ 1.28
GPC1-205ENST00000427506 FOXN1O15353 648 aa23.07■■□□□ 1.28
GPC1-205ENST00000427506 HIBADHP31937 336 aaKnown RBP23.07■■□□□ 1.28
GPC1-205ENST00000427506 GYG1P46976 350 aa23.07■■□□□ 1.28
GPC1-205ENST00000427506 IFFO2Q5TF58 517 aa23.07■■□□□ 1.28
GPC1-205ENST00000427506 ARHGAP45Q92619 1136 aa23.07■■□□□ 1.28
GPC1-205ENST00000427506 WBP1LQ9NX94 342 aa23.07■■□□□ 1.28
GPC1-205ENST00000427506 HDAC5Q9UQL6 1122 aa23.07■■□□□ 1.28
GPC1-205ENST00000427506 JAG2Q9Y219 1238 aa23.07■■□□□ 1.28
GPC1-205ENST00000427506 WNT10BO00744 389 aa23.06■■□□□ 1.28
GPC1-205ENST00000427506 IPO8O15397 1037 aaKnown RBP23.06■■□□□ 1.28
GPC1-205ENST00000427506 SASH1O94885 1247 aa23.06■■□□□ 1.28
GPC1-205ENST00000427506 VPS37DQ86XT2 251 aa23.06■■□□□ 1.28
GPC1-205ENST00000427506 SCAF8Q9UPN6 1271 aaKnown RBP23.06■■□□□ 1.28
GPC1-205ENST00000427506 ZNF646O15015 1829 aaPredicted RBP23.05■■□□□ 1.28
GPC1-205ENST00000427506 F8W031 263 aaPredicted RBP23.05■■□□□ 1.28
GPC1-205ENST00000427506 AOC2O75106 756 aa23.05■■□□□ 1.28
GPC1-205ENST00000427506 CERS5Q8N5B7 392 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms