RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 ZSCAN23Q3MJ62 389 aa16.66■□□□□ 0.26
APOBEC3D-202ENST00000427494 RBM27Q9P2N5 1060 aaKnown RBP16.66■□□□□ 0.26
APOBEC3D-202ENST00000427494 TCHHQ07283 1943 aa16.65■□□□□ 0.26
APOBEC3D-202ENST00000427494 AKAP11Q9UKA4 1901 aa16.65■□□□□ 0.26
APOBEC3D-202ENST00000427494 ZFYP08048 801 aaPredicted RBP16.65■□□□□ 0.26
APOBEC3D-202ENST00000427494 PI16Q6UXB8 463 aa16.65■□□□□ 0.26
APOBEC3D-202ENST00000427494 OSBP2Q969R2 916 aa16.65■□□□□ 0.26
APOBEC3D-202ENST00000427494 ARAP2Q8WZ64 1704 aa16.65■□□□□ 0.26
APOBEC3D-202ENST00000427494 LAMB2P55268 1798 aa16.65■□□□□ 0.26
APOBEC3D-202ENST00000427494 BCORQ6W2J9 1755 aa16.65■□□□□ 0.26
APOBEC3D-202ENST00000427494 PDE8BO95263 885 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 MCAMP43121 646 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 ZNF445P59923 1031 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 STK3Q13188 491 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 WASHC4Q2M389 1173 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 PARP10Q53GL7 1025 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 Q6ZUG5 572 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 STOX1Q6ZVD7 989 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 NGLY1Q96IV0 654 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 GDPD2Q9HCC8 539 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 VPS72Q15906 364 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 BCL9LQ86UU0 1499 aa16.64■□□□□ 0.25
APOBEC3D-202ENST00000427494 ZNF831Q5JPB2 1677 aa16.63■□□□□ 0.25
APOBEC3D-202ENST00000427494 HMGB1P09429 215 aaKnown RBP16.63■□□□□ 0.25
APOBEC3D-202ENST00000427494 HSP90B1P14625 803 aaKnown RBP16.63■□□□□ 0.25
APOBEC3D-202ENST00000427494 USP48Q86UV5 1035 aa16.63■□□□□ 0.25
APOBEC3D-202ENST00000427494 MTMR6Q9Y217 621 aa16.63■□□□□ 0.25
APOBEC3D-202ENST00000427494 ATP6V1DQ9Y5K8 247 aa16.63■□□□□ 0.25
APOBEC3D-202ENST00000427494 MROH5Q6ZUA9 1318 aa16.63■□□□□ 0.25
APOBEC3D-202ENST00000427494 VPS37CA5D8V6 355 aaPredicted RBP16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 PUM3Q15397 648 aaKnown RBP16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 CNPY2Q9Y2B0 182 aa16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 A0A0G2JLW4 131 aa16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 NTSR2O95665 410 aa16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 FGD1P98174 961 aa16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 LARP1BQ659C4 914 aaKnown RBP16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 HELBQ8NG08 1087 aaPredicted RBP16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 APPBP2Q92624 585 aa16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 TMEM63CQ9P1W3 806 aa16.62■□□□□ 0.25
APOBEC3D-202ENST00000427494 E7EWF7 191 aa16.61■□□□□ 0.25
APOBEC3D-202ENST00000427494 DHX32Q7L7V1 743 aaKnown RBP16.61■□□□□ 0.25
APOBEC3D-202ENST00000427494 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
APOBEC3D-202ENST00000427494 LINC00116Q8NCU8 138 aa16.61■□□□□ 0.25
APOBEC3D-202ENST00000427494 LPIN2Q92539 896 aa16.61■□□□□ 0.25
APOBEC3D-202ENST00000427494 MPHOSPH8Q99549 860 aa16.61■□□□□ 0.25
APOBEC3D-202ENST00000427494 ZNF652Q9Y2D9 606 aa16.61■□□□□ 0.25
APOBEC3D-202ENST00000427494 GADD45BO75293 160 aaPredicted RBP16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 PHKA1P46020 1223 aa16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 CCDC102BQ68D86 513 aa16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 BRF1Q92994 677 aa16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 GTF3C6Q969F1 213 aa16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 SEC31BQ9NQW1 1179 aa16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 MYO5AQ9Y4I1 1855 aaKnown RBP16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 PDCP20941 246 aa16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 ARID4AP29374 1257 aaPredicted RBP16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 TTLL5Q6EMB2 1281 aa16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 ZSCAN25Q6NSZ9 544 aa16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 PUS7LQ9H0K6 701 aaKnown RBP16.6■□□□□ 0.25
APOBEC3D-202ENST00000427494 UQCRFS1P1P0C7P4 283 aa16.59■□□□□ 0.25
APOBEC3D-202ENST00000427494 PDIA4P13667 645 aaKnown RBP16.59■□□□□ 0.25
APOBEC3D-202ENST00000427494 SLC5A1P13866 664 aa16.59■□□□□ 0.25
APOBEC3D-202ENST00000427494 FGFR2P21802 821 aa16.59■□□□□ 0.25
APOBEC3D-202ENST00000427494 CTNNA3Q9UI47 895 aa16.59■□□□□ 0.25
APOBEC3D-202ENST00000427494 FOXP2O15409 715 aa16.58■□□□□ 0.25
APOBEC3D-202ENST00000427494 PIH1D3Q9NQM4 214 aaKnown RBP16.58■□□□□ 0.25
APOBEC3D-202ENST00000427494 GPAA1O43292 621 aa16.58■□□□□ 0.24
APOBEC3D-202ENST00000427494 FIBPO43427 364 aa16.58■□□□□ 0.24
APOBEC3D-202ENST00000427494 ADD2P35612 726 aa16.58■□□□□ 0.24
APOBEC3D-202ENST00000427494 IGHMBP2P38935 993 aaKnown RBP16.58■□□□□ 0.24
APOBEC3D-202ENST00000427494 EXOSC10Q01780 885 aaKnown RBP16.58■□□□□ 0.24
APOBEC3D-202ENST00000427494 CDC37L1Q7L3B6 337 aa16.58■□□□□ 0.24
APOBEC3D-202ENST00000427494 RTN4Q9NQC3 1192 aaKnown RBP16.58■□□□□ 0.24
APOBEC3D-202ENST00000427494 RTL9Q8NET4 1388 aa16.58■□□□□ 0.24
APOBEC3D-202ENST00000427494 SYCE3A1L190 88 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 IDH1O75874 414 aaKnown RBP16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 ATRNO75882 1429 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 KCNQ4P56696 695 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 DNM1Q05193 864 aaKnown RBP16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 IMMTQ16891 758 aaKnown RBP16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 SLC9C2Q5TAH2 1124 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 SYAP1Q96A49 352 aaPredicted RBP16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 BTAF1O14981 1849 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 JAK2O60674 1132 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 NASPP49321 788 aaPredicted RBP16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 HAND2P61296 217 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 CLEC4GQ6UXB4 293 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 FNBP4Q8N3X1 1017 aaPredicted RBP16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 SCN7AQ01118 1682 aa16.57■□□□□ 0.24
APOBEC3D-202ENST00000427494 CASZ1Q86V15 1759 aa16.56■□□□□ 0.24
APOBEC3D-202ENST00000427494 PFKFB2O60825 505 aa16.56■□□□□ 0.24
APOBEC3D-202ENST00000427494 FGAP02671 866 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms